Cla97C11G218070 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G218070
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	DNA repair protein XRCC3 homolog
Location	Cla97Chr11: 23769121 .. 23770002 (+)
RNA-Seq Expression	Cla97C11G218070
Synteny	Cla97C11G218070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCCGGAAAATCTCCTCAATCTCCTTCAAACCACCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCCTGCAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAATTCCCTTTCCCCTTTCGACGCCTTCAACAACTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCAAACCCCTCCGATCACATCTTTGTCGAACCCGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATTCTTCCTCCAAAATCGAAATTCCCAATTGCCCATCAGGCTTATTGTGATTGATTCGATTGCGGCGTTGTTTCGCTCCGATTTCGGCAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGTTGTTGGCTAAGAAGTATTCTTTGGCTGTGGTTTTGACGAATCAGGTGGTTGATCTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGAGACGACGGGTTTGCCCGGCGCTGGGGCTGGCGTGGGCTAATTGTGTTAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGAGAAGGTGATGGTATGATGAATGGTAGTGAATTACTACAACGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAAGAGAGAAGGAGTTGTGGGAGTTGAAAGCCAATGA

mRNA sequence

ATGACGCCGGAAAATCTCCTCAATCTCCTTCAAACCACCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCCTGCAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAATTCCCTTTCCCCTTTCGACGCCTTCAACAACTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCAAACCCCTCCGATCACATCTTTGTCGAACCCGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATTCTTCCTCCAAAATCGAAATTCCCAATTGCCCATCAGGCTTATTGTGATTGATTCGATTGCGGCGTTGTTTCGCTCCGATTTCGGCAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGTTGTTGGCTAAGAAGTATTCTTTGGCTGTGGTTTTGACGAATCAGGTGGTTGATCTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGAGACGACGGGTTTGCCCGGCGCTGGGGCTGGCGTGGGCTAATTGTGTTAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGAGAAGGTGATGGTATGATGAATGGTAGTGAATTACTACAACGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAAGAGAGAAGGAGTTGTGGGAGTTGAAAGCCAATGA

Coding sequence (CDS)

ATGACGCCGGAAAATCTCCTCAATCTCCTTCAAACCACCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCGCCTGCAGCTCCCTCACTGAAATCGTCGCCGAAAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCTCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGCCTCAACGCCTCATCTCTCTACATCCACACCGAATTCCCTTTCCCCTTTCGACGCCTTCAACAACTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCAAACCCCTCCGATCACATCTTTGTCGAACCCGTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATTCTTCCTCCAAAATCGAAATTCCCAATTGCCCATCAGGCTTATTGTGATTGATTCGATTGCGGCGTTGTTTCGCTCCGATTTCGGCAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGGAAGTTGAAGTTGTTGGCTAAGAAGTATTCTTTGGCTGTGGTTTTGACGAATCAGGTGGTTGATCTGATGGGTTCTTCTGATGGATTGAATGCTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGAGACGACGGGTTTGCCCGGCGCTGGGGCTGGCGTGGGCTAATTGTGTTAATTCAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGAGAAGGTGATGGTATGATGAATGGTAGTGAATTACTACAACGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGAGTATGTAATCAAGAGAGAAGGAGTTGTGGGAGTTGAAAGCCAATGA

Protein sequence

MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ

Homology

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BLAST of Cla97C11G218070 vs. NCBI nr
Match: XP_004150781.1 (DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical protein Csa_021163 [Cucumis sativus])

HSP 1 Score: 563.5 bits (1451), Expect = 1.0e-156
Identity = 284/294 (96.60%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNSQLPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQ-RRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ 294
           EEVVGEG+GMMNGSEL+Q RRTRRWLHVVFAPHLPKSSCEYVI REGVVGVESQ
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 294

[Close]

BLAST of Cla97C11G218070 vs. NCBI nr
Match: XP_008451720.1 (PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 555.4 bits (1430), Expect = 2.8e-154
Identity = 279/293 (95.22%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           EEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLPKSSCEYVI REGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of Cla97C11G218070 vs. NCBI nr
Match: TYK01347.1 (DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153
Identity = 277/293 (94.54%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           EEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLP+SSCEYVI REGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]

BLAST of Cla97C11G218070 vs. NCBI nr
Match: XP_038890688.1 (DNA repair protein XRCC3 homolog [Benincasa hispida])

HSP 1 Score: 550.4 bits (1417), Expect = 9.1e-153
Identity = 275/293 (93.86%), Postives = 284/293 (96.93%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCPIIDRS GGGVACSSLTEIVAESGCGKTQLCLQLSL AQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSAGGGVACSSLTEIVAESGCGKTQLCLQLSLYAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE FL+N NSQLPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLKNSNSQLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSL VVLTNQVVDL+GSSDGLNALRIGNLKFL SS R+VCPALGLAWANCVN+RLFLSRN
Sbjct: 181 YSLGVVLTNQVVDLIGSSDGLNALRIGNLKFLSSSGRQVCPALGLAWANCVNTRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ 294
           EE+VGEG+GMMNGSEL+QRRTRRWLHVVFAPHLPKSSCEYVI REGVVGVESQ
Sbjct: 241 EEIVGEGEGMMNGSELVQRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 293

[Close]

BLAST of Cla97C11G218070 vs. NCBI nr
Match: KAG7020901.1 (DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.9 bits (1361), Expect = 2.8e-146
Identity = 264/293 (90.10%), Postives = 276/293 (94.20%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVAC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGLNA+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLNAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE FL NR+S LP RLIVIDSIAALFRSDF NTPSDLKRRS+LFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ 294
           EEVVGEGDG++N  EL QRRTRRWLHVVFAPHLPKSSCEYVI R+GVVGVESQ
Sbjct: 241 EEVVGEGDGVVNSGELAQRRTRRWLHVVFAPHLPKSSCEYVINRQGVVGVESQ 293

[Close]

BLAST of Cla97C11G218070 vs. ExPASy Swiss-Prot
Match: Q9FKM5 (DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 6.0e-99
Identity = 181/297 (60.94%), Postives = 226/297 (76.09%), Query Frame = 0


Query: 3   PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F NTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           SR++   V    +   N S  + R  +R L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRRLDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of Cla97C11G218070 vs. ExPASy Swiss-Prot
Match: Q9CXE6 (DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.3e-34
Identity = 102/287 (35.54%), Postives = 146/287 (50.87%), Query Frame = 0


Query: 14  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
           Q+ + GCP++D+ +GGG+    +T +   S  GKTQL LQL L  Q P   GGL A ++Y
Sbjct: 80  QRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVY 139

Query: 74  IHTEFPFPFRRLQQL---SQAFSSSYPQ-------FSNPSDHIFVEPVHSAHQLFDIMPK 133
           I TE  FP +RL QL    +   +  P+       FSN   HIF+E       L + + K
Sbjct: 140 ICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSN---HIFIEHAADVDTLLECVSK 199

Query: 134 IEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSL 193
               L +R      RL+V+DSIAA FR +F    S +  R+ L   +   L+ L+  +  
Sbjct: 200 KVPILLSRGM---ARLVVVDSIAAPFRCEFHLQASAI--RAKLLLSLGATLRRLSSTFRS 259

Query: 194 AVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEV 253
            V+  NQV D++     ++       + L +S  R+ PALG+ WAN +  RL + R  E 
Sbjct: 260 PVLCINQVTDMVEDQQSVS-------RSLGASEERLSPALGITWANQLLMRLMVDRTHE- 319

Query: 254 VGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGV 291
               D +  G   L R   R L V+FAPHLP SSC Y +  EG+ G+
Sbjct: 320 ----DDVTTG---LPRSPVRTLRVLFAPHLPLSSCCYTVSGEGIRGM 343

[Close]

BLAST of Cla97C11G218070 vs. ExPASy Swiss-Prot
Match: Q08DH8 (DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-31
Identity = 97/288 (33.68%), Postives = 138/288 (47.92%), Query Frame = 0


Query: 14  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
           Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  QLP  +GGL A ++Y
Sbjct: 80  QRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGAGAVY 139

Query: 74  IHTEFPFPFRRLQQL---SQAFSSSYPQFSNPSDHIFVEPVHSAHQLF-DIMPKIEFFLQ 133
           + TE  FP RRLQQL    Q   +  P       H+ +  +   HQ+F +    ++  LQ
Sbjct: 140 VCTEDAFPSRRLQQLIAQQQRLRADVP------GHV-ISKIRFGHQIFIEHAADVDTLLQ 199

Query: 134 NRNSQLPI-------RLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYS 193
               ++P+       RL+VIDS+AA FR +F    + L  R+     +  +L+ L+  + 
Sbjct: 200 CVREKVPVLLARGMARLVVIDSVAAPFRCEFDG--AALALRAQRLLALGAELRRLSCAFR 259

Query: 194 LAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEE 253
             V+  NQV + +   D            L +    + PALG+ WAN +  RL   R   
Sbjct: 260 SPVLCVNQVTEAVEEQD------------LVAGPPGMSPALGITWANQLLVRLLADRQRP 319

Query: 254 VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGV 291
                       E       R L VVFAPHLP SSC Y I  EGV G+
Sbjct: 320 -----------EEAPLTPPGRTLRVVFAPHLPASSCSYTIAAEGVRGM 335

[Close]

BLAST of Cla97C11G218070 vs. ExPASy Swiss-Prot
Match: O43542 (DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.2e-31
Identity = 96/284 (33.80%), Postives = 137/284 (48.24%), Query Frame = 0


Query: 14  QKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLY 73
           Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  Q P  +GGL A ++Y
Sbjct: 80  QRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVY 139

Query: 74  IHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLF-DIMPKIEFFLQNRN 133
           I TE  FP +RLQQL     +  P+         ++ +    Q+F + +  ++  L+  N
Sbjct: 140 ICTEDAFPHKRLQQL----MAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 199

Query: 134 SQLPI-------RLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAV 193
            ++P+       RL+VIDS+AA FR +F +  S  + R      +   L+ L+  +   V
Sbjct: 200 KKVPVLLSRGMARLVVIDSVAAPFRCEFDSQASAPRARH--LQSLGATLRELSSAFQSPV 259

Query: 194 VLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVG 253
           +  NQV + M      +    G L F      RV PALG+ WAN +  RL   R  E   
Sbjct: 260 LCINQVTEAMEEQGAAH----GPLGFW---DERVSPALGITWANQLLVRLLADRLRE--- 319

Query: 254 EGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVG 290
                    E       R L V+ APHLP SSC Y I  EGV G
Sbjct: 320 --------EEAALGCPARTLRVLSAPHLPPSSCSYTISAEGVRG 339

[Close]

BLAST of Cla97C11G218070 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 89/282 (31.56%), Postives = 144/282 (51.06%), Query Frame = 0


Query: 23  IDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPF 82
           +D ++ GGVAC SLTEI    GCGKTQ C+ +S+ A LP + GGL  + +YI TE  F  
Sbjct: 90  LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149

Query: 83  RRLQQLSQAFSSSYPQFSNPSDHIFV--EPVHSAHQLF--DIMPKIEFFLQNRNSQLPIR 142
            RL ++++   S +P++ N  + + +    VH   +L   +++ +IE  L+       I+
Sbjct: 150 ERLVEIAE---SRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIE-SLEEEIISKGIK 209

Query: 143 LIVIDSIAALFRSDF-GNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQV------ 202
           L+++DS+A++ R +F      +LK R+    + +  LK LA+++S+ V+LTNQ+      
Sbjct: 210 LVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSG 269

Query: 203 -----VDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGE 262
                 DL+  +D L +L  G     C     V  ALG  W++ VN+RL L   +     
Sbjct: 270 ALASQADLVSPADDL-SLSEGTSGSSC-----VIAALGNTWSHSVNTRLILQYLDS---- 329

Query: 263 GDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVV 289
                          RR + +  +P  P +S  Y IK EG+V
Sbjct: 330 --------------ERRQILIAKSPLAPFTSFVYTIKEEGLV 343

[Close]

BLAST of Cla97C11G218070 vs. ExPASy TrEMBL
Match: A0A0A0LK93 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.0e-157
Identity = 284/294 (96.60%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNSQLPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQ-RRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ 294
           EEVVGEG+GMMNGSEL+Q RRTRRWLHVVFAPHLPKSSCEYVI REGVVGVESQ
Sbjct: 241 EEVVGEGEGMMNGSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVESQ 294

[Close]

BLAST of Cla97C11G218070 vs. ExPASy TrEMBL
Match: A0A5A7UPR6 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00560 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154
Identity = 279/293 (95.22%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           EEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLPKSSCEYVI REGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of Cla97C11G218070 vs. ExPASy TrEMBL
Match: A0A1S3BRJ5 (DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154
Identity = 279/293 (95.22%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           EEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLPKSSCEYVI REGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPKSSCEYVINREGVVGVES 293

[Close]

BLAST of Cla97C11G218070 vs. ExPASy TrEMBL
Match: A0A5D3BPT7 (DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00290 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 8.9e-154
Identity = 277/293 (94.54%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCP IDRSVGGG+ACSSLTEIVAESGCGKTQLCLQLSLCAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPTIDRSVGGGIACSSLTEIVAESGCGKTQLCLQLSLCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFSNPSDHIFVEPVHSAHQLFDI
Sbjct: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSEAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE  L+NRNS LPIRLIVIDSIAALFRSDF NTPSDLKRRSSLFFKISGKLKLLAKK
Sbjct: 121 MPKIESSLENRNSHLPIRLIVIDSIAALFRSDFDNTPSDLKRRSSLFFKISGKLKLLAKK 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSS RRVCPALGLAWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRR-TRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           EEVVGEG+GM+NGSEL+QRR TRRWLHVVFAPHLP+SSCEYVI REGVVGVES
Sbjct: 241 EEVVGEGEGMVNGSELVQRRKTRRWLHVVFAPHLPESSCEYVINREGVVGVES 293

[Close]

BLAST of Cla97C11G218070 vs. ExPASy TrEMBL
Match: A0A6J1FDM2 (DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146
Identity = 264/293 (90.10%), Postives = 276/293 (94.20%), Query Frame = 0


Query: 1   MTPENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
           MTPENLL+LLQTTQKCTFGCPIIDRSVGGGVAC+SLTEIV+ESGCGKTQLCLQL  CAQL
Sbjct: 1   MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACNSLTEIVSESGCGKTQLCLQLCHCAQL 60

Query: 61  PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
           PLS GGL A+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ SNPSDHIFVEPVHSA QLFDI
Sbjct: 61  PLSLGGLKAASLYIHTEFPFPFRRLQQLSQAFSSSYPQISNPSDHIFVEPVHSAQQLFDI 120

Query: 121 MPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKK 180
           MPKIE FL NR+S LP RLIVIDSIAALFRSDF NTPSDLKRRS+LFFKISGKLKLLAK+
Sbjct: 121 MPKIESFLANRDSPLPTRLIVIDSIAALFRSDFDNTPSDLKRRSALFFKISGKLKLLAKR 180

Query: 181 YSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRN 240
           YSLAVVLTNQVVDLM SSDG+NALRIGNLK LCSS RRVCPALG+AWANCVNSRLFLSRN
Sbjct: 181 YSLAVVLTNQVVDLMDSSDGINALRIGNLKSLCSSGRRVCPALGIAWANCVNSRLFLSRN 240

Query: 241 EEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVESQ 294
           EEVVGEGDG++NG EL QRRTRRWLHVVFAPHLPKSSCEYVI R+GVVGVESQ
Sbjct: 241 EEVVGEGDGVVNGGELAQRRTRRWLHVVFAPHLPKSSCEYVINRQGVVGVESQ 293

[Close]

BLAST of Cla97C11G218070 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 362.1 bits (928), Expect = 4.3e-100
Identity = 181/297 (60.94%), Postives = 226/297 (76.09%), Query Frame = 0


Query: 3   PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F NTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           SR++   V    +   N S  + R  +R L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRRLDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of Cla97C11G218070 vs. TAIR 10
Match: AT5G57450.2 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 362.1 bits (928), Expect = 4.3e-100
Identity = 181/297 (60.94%), Postives = 226/297 (76.09%), Query Frame = 0


Query: 3   PENLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPL 62
           PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+
Sbjct: 8   PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67

Query: 63  SNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF-----SNPSDHIFVEPVHSAHQL 122
           S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P        NP DH+FV+ VHS   L
Sbjct: 68  SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127

Query: 123 FDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLL 182
           FDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F NTPSDLK+RSSLFFKISGKLK L
Sbjct: 128 FDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQL 187

Query: 183 AKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFL 242
           A K+ LA+V+TNQV DL+ +SDGL+ LRIGNL++L SS RRV P+LGLAWANCVNSR F+
Sbjct: 188 ASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFFI 247

Query: 243 SRNEE--VVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGVVGVES 293
           SR++   V    +   N S  + R  +R L +VF+P+LP SSCE++I REG+  V++
Sbjct: 248 SRSDGSIVKDRSEKDENCSSSVSRSAKRRLDIVFSPYLPGSSCEFMITREGICAVQA 304

[Close]

BLAST of Cla97C11G218070 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 82/300 (27.33%), Postives = 139/300 (46.33%), Query Frame = 0


Query: 5   NLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++L+  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 94  DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q+++A      +++               P D   +IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213

Query: 125 VEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLF 184
              V S  +   ++  +E F+        ++++++DSI   FR D+     DL +R+ + 
Sbjct: 214 YFRVCSYTEQIALVNHLEKFISENKD---VKVVIVDSITFHFRQDY----DDLAQRTRVL 273

Query: 185 FKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAW 244
            +++ K   LAKK+SLAVVL NQV      S+G   L +               ALG +W
Sbjct: 274 SEMALKFMKLAKKFSLAVVLLNQVTTKF--SEGSFQLAL---------------ALGDSW 333

Query: 245 ANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV 288
           ++   +R+ L              NG E       R+ ++  +P LP +S  Y +   G+
Sbjct: 334 SHSCTNRVIL------------YWNGDE-------RYAYIDKSPSLPSASASYTVTSRGL 350

[Close]

BLAST of Cla97C11G218070 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 82/300 (27.33%), Postives = 139/300 (46.33%), Query Frame = 0


Query: 5   NLLNLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSN 64
           ++L+  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   
Sbjct: 118 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 177

Query: 65  GGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS--------------NPSD---HIF 124
           GGL   ++YI TE  F   R  Q+++A      +++               P D   +IF
Sbjct: 178 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 237

Query: 125 VEPVHSAHQLFDIMPKIEFFLQNRNSQLPIRLIVIDSIAALFRSDFGNTPSDLKRRSSLF 184
              V S  +   ++  +E F+        ++++++DSI   FR D+     DL +R+ + 
Sbjct: 238 YFRVCSYTEQIALVNHLEKFISENKD---VKVVIVDSITFHFRQDY----DDLAQRTRVL 297

Query: 185 FKISGKLKLLAKKYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSRRRVCPALGLAW 244
            +++ K   LAKK+SLAVVL NQV      S+G   L +               ALG +W
Sbjct: 298 SEMALKFMKLAKKFSLAVVLLNQVTTKF--SEGSFQLAL---------------ALGDSW 357

Query: 245 ANCVNSRLFLSRNEEVVGEGDGMMNGSELLQRRTRRWLHVVFAPHLPKSSCEYVIKREGV 288
           ++   +R+ L              NG E       R+ ++  +P LP +S  Y +   G+
Sbjct: 358 SHSCTNRVIL------------YWNGDE-------RYAYIDKSPSLPSASASYTVTSRGL 374

[Close]

BLAST of Cla97C11G218070 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-16
Identity = 75/271 (27.68%), Postives = 118/271 (43.54%), Query Frame = 0


Query: 17  TFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHT 76
           T G   +D+ + GG+   S+TE+  E   GKTQLC  L +  QLP+  GG    ++YI  
Sbjct: 106 TSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDA 165

Query: 77  EFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIEFFLQNRNSQLP 136
           E  F  +RL Q++  F  +        +  +    ++ HQ   ++      ++ R     
Sbjct: 166 EGTFRPQRLLQIADRFGLNGADVL--ENVAYARAYNTDHQSRLLLEAASMMIETR----- 225

Query: 137 IRLIVIDSIAALFRSDFGNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLMG 196
             L+++DS  AL+R+DF     +L  R     K    L+ LA ++ +AVV+TNQVV    
Sbjct: 226 FALLIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV---A 285

Query: 197 SSDGLNALRIGNLKFLCSSRRRVCPALGLAWANCVNSRLFLSRNEEVVGEGDGMMNGSEL 256
             DG +AL  G          +  P  G   A+   +RL L +                 
Sbjct: 286 QVDG-SALFAG---------PQFKPIGGNIMAHATTTRLALRKG---------------- 337

Query: 257 LQRRTRRWLHVVFAPHLPKSSCEYVIKREGV 288
             R   R   V+ +P LP++   + I  EGV
Sbjct: 346 --RAEERICKVISSPCLPEAEARFQISTEGV 337

The following BLAST results are available for this feature:

BLAST of Cla97C11G218070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150781.1	1.0e-156	96.60	DNA repair protein XRCC3 homolog [Cucumis sativus] >KGN61137.1 hypothetical prot...	[more]
XP_008451720.1	2.8e-154	95.22	PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo] >KAA0055575.1 DNA rep...	[more]
TYK01347.1	1.8e-153	94.54	DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa]	[more]
XP_038890688.1	9.1e-153	93.86	DNA repair protein XRCC3 homolog [Benincasa hispida]	[more]
KAG7020901.1	2.8e-146	90.10	DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of Cla97C11G218070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM5	6.0e-99	60.94	DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 S...	[more]
Q9CXE6	2.3e-34	35.54	DNA repair protein XRCC3 OS=Mus musculus OX=10090 GN=Xrcc3 PE=2 SV=1	[more]
Q08DH8	3.2e-31	33.68	DNA repair protein XRCC3 OS=Bos taurus OX=9913 GN=XRCC3 PE=2 SV=1	[more]
O43542	9.2e-31	33.80	DNA repair protein XRCC3 OS=Homo sapiens OX=9606 GN=XRCC3 PE=1 SV=1	[more]
O15315	1.2e-27	31.56	DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2	[more]

BLAST of Cla97C11G218070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK93	5.0e-157	96.60	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058700 PE=4...	[more]
A0A5A7UPR6	1.4e-154	95.22	DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BRJ5	1.4e-154	95.22	DNA repair protein XRCC3 homolog OS=Cucumis melo OX=3656 GN=LOC103492927 PE=4 SV...	[more]
A0A5D3BPT7	8.9e-154	94.54	DNA repair protein XRCC3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1FDM2	1.4e-146	90.10	DNA repair protein XRCC3 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444415 P...	[more]

BLAST of Cla97C11G218070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57450.1	4.3e-100	60.94	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT5G57450.2	4.3e-100	60.94	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT2G45280.1	1.4e-21	27.33	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	1.4e-21	27.33	RAS associated with diabetes protein 51C	[more]
AT5G20850.1	2.3e-16	27.68	RAS associated with diabetes protein 51	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01874	DNAREPAIRADA	coord: 25..53 score: 41.29 coord: 143..167 score: 19.08
None	No IPR available	PANTHER	PTHR46487	DNA REPAIR PROTEIN XRCC3	coord: 1..292
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 1..293 e-value: 7.5E-51 score: 171.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..292 e-value: 6.5E-62 score: 211.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..288
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 12..288 e-value: 2.2E-41 score: 141.8
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 12..191 score: 46.709461
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 17..288 e-value: 3.20196E-81 score: 243.26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G218070.1	Cla97C11G218070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045003	double-strand break repair via synthesis-dependent strand annealing
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0071140	resolution of mitotic recombination intermediates
biological_process	GO:0090656	t-circle formation
biological_process	GO:0000722	telomere maintenance via recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033065	Rad51C-XRCC3 complex
cellular_component	GO:0005657	replication fork
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0003677	DNA binding