Cla97C11G217830 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G217830
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 23078408 .. 23082014 (-)
RNA-Seq ExpressionCla97C11G217830
SyntenyCla97C11G217830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACATTTGCAACAGGTATATATGACTTAGTTACTTTGTATTTATAAATGCATTTGGTAATTGATTTGCTATATTTTGAAAATAATATTTTTTCTTAACTTCAAGTTCACATTGATTTGTACGAGGATCTAAATGAGACAATAATGATGCATTCTATGCAATTTTCTTTTCCAACTTCTTAATTCCTCCCCCCTAATATTAGAAAAATTGGCTCATTAAAATGACAATCAGCGAATCGTGCAATAAAGACATCACCCATCAAAGGTTCAAGATATTTAATAATTGATGGGGAATCATATCCAACATATATTCCTAACCTCCTTTGAGGTCCCATCTTAATATGTTGTGGTAAAGCAATTGGAACATATATTGCACATAAAAAAGTTCTCAAATGGGAAATATTTGGCTTTTGGCCATAAGCTAATTGTAATGGCGAATGTTTATGATAAGCTAATGACCTAATGCGTGGAAGTGACGCAACATGCAAAATAGCATGTCTCTATATAGATGTAGAAAGCTTAGCTCTCATAAGTAATGGTCTAGCAATTACAAAACATTAAGTTTTCGGACTAGTGGTCCGAACACCAAAAGATGTCAAACCTATGGGATATAAATGGGTATTTGTAAGAAAAAGAAATGAAAATAATGAGGTCACAAGATATAAAGCAAAACTAGTTGTACAAGGTTTTTCACAAAGACCAAGTATTGATTATGAGGAGACATATTCTCTAGTGGTTAATACAATTACATTAGGATATTTAATTGGTCAGACTGTGTATGAAAATCAGGATATGCATCTTATGGATTTAGTCATAACATATTTTTATGGATCACTTGATAATGATATTTATATGAGAATCCCATAAGGATTTAAGATATCTGAAACATATAAATCAAGTTCTCGAGAATTATATTTAATAAAGTTATAGAAATCACTATATAGATTGAAACAATCAGAACGAATGTGGTATAATCGCCTAAGTGAATATTTGTTGAAAGAAGGATATCAAAATAATCTAATATGTCCATGTGTTTTTATAAAGAAGTCACAGTTAGGATTTGATATTATAACTATAAATGTTGATGACCTAAATATAATTGGAACTTCTGAAAAGCTTTCAAAGGCATTAGAATATCTTAAGAAAGAATTTGAGATGAGAAAAACAAAATTTTGCCTTAGATTGTAAATTGAACATTTAGTAGATGAGATATTTGTTCATTAGTCAACTTACAGTGAAAATTTCAAAAAGATTCTATATGGACAAAACACATCCATTAAATATTCCAATGAAAGTTCGTTCACTAAATGTAAAGAAAGATATATATTTCGACCTTGAGATAATAATGAAGAATTTCTTGGTCTCGAAGTACTATATCTTAGTGCAATTAGTGCACTGATGTATCTTGCTAATAATACAAGACTAGATATTGTATTTTTAGTAAATTTATTAGCTAGATATAGTTATTCTCCAAGAAAAATACATTGAAATGGAATTAAGCATATACTTCGTTATTTTCGAGGAACGATCGATATGAATTTGTTTTATTCAAATAAAAATTTTTTTGATTTAGTTGGTCATGCATATTCTAGATATTTATCTGATCCACAATAAGTTAGATCTCAAGCAAGTTACCTATTCACATGTGGAGGAATTACTATATCTTAGAGATCAGTGAAACAAACCATAACAATTACTTCCTCAAATCTTGCTGAAATTCTTGCCATCCATGAGGCTAGTAGAGAATGTGTATGGCTAAGAGCAATGACTCAATACATTCACGAAACATGTGACTTGTCTTCTAGTAAAATTTCTCCAACAACATTATACGAAAACAACACAACATTTATATCCCAAATCAAATGAGGATATATTAAAGGAGATAAAACAAAACATATTTCACGAAAACTTTTCTACACTCATAATCTTGAAGAAAATGACAACATCACTGTACAAAAAAATTGTTTGAAGGATAACCTGATAGACATATTTACAAAAGCATTACCTACCACAACTTTTGAAAAATTGGTGCAGAACATTCAGCGACTCAGAAATCTCAAGTGATGTTCTTTTGAGGGGAACAAATGTATTGTATTCTTTTATAAGTATTAGATTATATGAAATATACTTTTTTTTTCTTCATTTATTAGGATTTTTTTCCATTGGATTTTTTTTTCTAGTAAGGTTTTAACAAGTCATATTTTAATGTATCTTGGAGGAGTATTATAAATATTCAAAATATGTGTAATTTAGATGCTCATGCTTAGTGTCCAAATGTCATGTGTCTTATAACTGTACATCCTTACTAGTCATGTTTTTCCACCACCTACTTGCCAAATTGTCTAGAAATAGTGGCATAGATGTTGAATGTACACACATTGGTGAGAAAAGAAAAGAAGAGATTGAAGAAATTTGAGAGATTTCTAAATTGTTATAAAATTCTATTTCCTATCATTTCATTATTTTATTTCCTATAATTTATTATATTTATTTTAATATTATAATTCTTCTGCATTTGTATTTCTGTTTTTCTACATTTTGTTTCTCAAGGAAACATATATATTTTCTTTTTAAGCACAATAAAAATGTAAAATCTTAATCTGGAACTATATTCCACATATAATATAAGCAATACGTTTATACACTTAATTTTTGTAATAAAACAAGTTTATATATCCTTAGCCTCAATTAAAAAAAAGAAAATTCTAATTTGGCGGCCGACGGCGAGGCAAGTTGTGAAAATACAAGGCTAATTCTGCCGCAGTTCGTTCAAACGTTCAATAAAAAGTCAACGTAAAACCCAGCGACCAATATAGAACAAGAAATCAACGACCACGCGCCGTTAGAGCGCGTTAACGTACACGCTCCGACCACCTTTGTCCAATTAGAAATAAGAAAAGACCCCAAAAAAACCCAAAAATTCTTTTTTATAATCAAATTTAACGAGAAACGCCGGCCCCGAAATGTTTGTGATTGGAAGAGTCATTGGCCCTCCAAAAACGAGGACTGCGTCCACTACTCTCTCTTTCTCTCTCTCTCACAGCACCATTTTTATATACACAGAGTTTTAGAGAGAGAATATAAGAAAGAGAGAGAGCGAAGAATTAAAACAGAAGAAGAAGCTCGAGAAATCAATTTCTTTCGATTTGTTTACCAAGGAATGCAAAAGGGTCGTTTCGATTTTGCGAATTTCACCCTTTATTTTCTTTAATCTGACTTGGGTTTTGTGGGTTCTTTATGGAATGGTCGTCTTCTTCAACTTAGATCTCAGAATTTATCAATACTTTAGAGCTTGGGGGTTTTCAGATCTTCGATTCGACGGTCGGATTCCGATCACTCAGCTCAATAACTCAGGTATTTGTGTTTTTTTATCGTCCCTTTTGAATCCAATCGGTTCCCATGTTTCCATTCTTCAATTCCATTTTTGGGGTCTCTCTGTTTTGCTTCTAGTTAATGGTGGGTGAACTTACGGGATTAAGGTTTTGGGTTTTATTGCATTGTCTTGTGGATTTAGTATTAACCCACCGACGAACAGAGCATTAGAAGAATTGGGGTATCGATGGAGTTGTTTTGGGAGTTTGACCGGCGAAGTGGCAGAGTTTTAA

mRNA sequence

ATGGAACATTTGCAACAGATCTCAGAATTTATCAATACTTTAGAGCTTGGGGGTTTTCAGATCTTCGATTCGACGGTCGGATTCCGATCACTCAGCTCAATAACTCAGGTTTTGGGTTTTATTGCATTGTCTTGTGGATTTAGTATTAACCCACCGACGAACAGAGCATTAGAAGAATTGGGGTATCGATGGAGTTGTTTTGGGAGTTTGACCGGCGAAGTGGCAGAGTTTTAA

Coding sequence (CDS)

ATGGAACATTTGCAACAGATCTCAGAATTTATCAATACTTTAGAGCTTGGGGGTTTTCAGATCTTCGATTCGACGGTCGGATTCCGATCACTCAGCTCAATAACTCAGGTTTTGGGTTTTATTGCATTGTCTTGTGGATTTAGTATTAACCCACCGACGAACAGAGCATTAGAAGAATTGGGGTATCGATGGAGTTGTTTTGGGAGTTTGACCGGCGAAGTGGCAGAGTTTTAA

Protein sequence

MEHLQQISEFINTLELGGFQIFDSTVGFRSLSSITQVLGFIALSCGFSINPPTNRALEELGYRWSCFGSLTGEVAEF
Homology
[Close]
BLAST of Cla97C11G217830 vs. NCBI nr
Match: KAG7020924.1 (hypothetical protein SDJN02_17612, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 7  ISEFINTLELGGFQIFDSTVGFRSLSSITQVLGFIALSCGFSINPPTNRALEELG 62
          ISEFI TLE+GGFQIFDST GF+SLSS TQ L            PPT +++ ++G
Sbjct: 44 ISEFIITLEVGGFQIFDSTAGFQSLSSRTQYL------------PPTEQSIRDIG 86

The following BLAST results are available for this feature:
BLAST of Cla97C11G217830 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7020924.11.1e-0454.55hypothetical protein SDJN02_17612, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cla97C11G217830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G217830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G217830 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G217830.1Cla97C11G217830.1mRNA