Cla97C11G215395 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G215395
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRibosomal protein S19
LocationCla97Chr11: 11950464 .. 11953981 (-)
RNA-Seq ExpressionCla97C11G215395
SyntenyCla97C11G215395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAAAGGAGGGGAAGGAATTAGGATTTATTATAAATCCTCCTCGGTTTGCGTGCAGATTAAAAAAAAAAAAAGGAAATCTCTCCCTCTTCCCTCTCCCTCTCCGCCACCACTCTCTCCCCCTTCCTCTCCCGATTTTCTCTGCCGCCGCCGCTCTCCATTCCTTTTTCCGTTCTCCCTCTCCACCGCCACACTCTCTCTTTACCTATGTTTCCGCTCTCTCTCTCTCAGTTGCCGCTCGCTTTCCCGGAAGTTGCACGCTCAGAATCACGCTCTCTCGCCCAGGATCTCGCTCTCTTGCTCGGACTCTCGCTCTTTCGCTCTCTTGCTCGGATTCTCGCTCTCTTGCTCTTGCTCAGAATCTCGCTCTCGGCTACGACTAATTGCTTGCCTGACCGTCAGTCACCGGATCAATATTCCCTAGGTGGTCGGCGATTACTTTGGTTCGTAGGATCGGAGGAAACTGCGAGTTTAGCCACGTTAGGGTAAGGACTCTCTTGAATGAACTTTGAGTTTACTTATGACGGGTTAGGCTTGATGAATAACTTAAGTTAGGGGAATTGTATTCCTAGTTTATTCAGGACTTTTGCGAGAGTTGCGGTGTGGTTAGCCTTATGGATCAACCTTCAGGTAAGTGATCTTACTACCTGAACTGCCTTCGGGCCATATGATTAGTTGCCATGATGTAATAGGTTTCTAGAGCCACTTATGAGATACTATGCTTGTATGGAATTTCCATGTCTTAAAATTATATGTGCCTGTTAGTGTATAAACCTATGCTATAAAACATTTATGAATCTTACTGTTAGTGTATGAATCCATGGATGGAATGATTGTGAACTTTATTGATCTTGTACGATGAGTAGTGGTGACTCCCCTATGTTGGTTGGGTGTCCACAGGAGGTTGTGTTCCTTCGGGTTCACTAGAGGTTGTGTTCCTTTGGGTTCACTAGAGGTTGTGTTCCTTCGGGTACACCAGAGGTTTGCGTTCCTTCGGGATCACCAGAGGTAAGAGTCTCCTTCGGGGCTTACTAATGGTTTGTGGGCATCCATACCCAACGGTGGGGCGGGTCTAACCATTCCCTTATAGAAGTATGGCATATGATGGATATGCATGTCTCATGTTTGACACACTTAATGGACTTAGGTGCCTAGCCCGACTCCGGTAGTGGGGTTACTTACTGAGTAATATAATTACTCATCCTTTCCTCTTATATGTTTTTCAGGTAAAGGAAGGAATGTGTTGACGAATGACAAGAAGAATCCTTGACGGCATCACGGGACCCATAGCAGCTTCCGCTTAGTCTTGCATGTTTTACTGAAATTTCGTCAAACTGTCTAGTTTTATTTTGAGACTCGTCTCCCTATTTGTTTATGCTGATTTTCATTCATGAAGCTTCTTTTATTGTTTTCCTTAGGGGTACCCTGAACCAAAATTTCCTTTTATTTGTTATTGCGTTGATTTCTTGAATTAAAATAAGTAGAAATTTTCATGGAAAGCATGGGTTCTTCTTTACTATTCAGTATAGTGTCGTTCCTTCGAATTGTTGCATGCACTGAGTAATGGTCCGATTAGCTAGTGTTAGTCGGGTCGTTACATTTTTAATGATATTCATTCCAACTAAACTCTTGATTTCTATAGTCTTAAAGTCTTAAACCTATAAGAATTACACAAAAGATCAAAGGTAGTATTAACTAACATATATGATCATTATATGTTAGTTAATAGTGCACAAATTCGTCCAAATGATGCACACTTTGATAAAGTTGGTGAAATTAAAGGTTGTTTTAATGGCGCATCTTAATGTATCTCATCTAGATCTAAAAAAACCCAAAACTAGCTTCTCATTACATTTAAACCATCGATTTTTTGGAGCTTTCTTGGTTGAATTATGACCGAGACAAACTAATTAGTCCAAATAACGCACACTTTGAATTTAACAAATACCACAACTATAATGCACACCCATAATTTAACAAATAATCAACAAATTCGTCCAAATACCACAATCATAATCAACCTACTTCTCTAAATCAAGCACATATTAGTGAATACCACAACCATAATCAGAGAAAACATCAAATTAACTCATAGCAAGAAAAATTTAGAGAAATCTTACCTCAAGTAAATCAAATTCGTCCAAGCTTGGCCAAAACCCACAGATCTGGATTTGGGGAGAGCAAAGAGAGGGAGAGACCAACGAGATGGATAGACCGAAGAGAGCAAGAGACCGAGGAGATGGAGACGAGATCGAAGAAACACAGAGAGAAGAGAGGGAGAGAGCAACAAGATGTGAGATCGATGAAAGAGAGAGCGATGGAAGAGAGAGCGATGGAAGAGAGAGCGAAGAGAGGGAGAGGGATCGACGGAAGAGAGACCGATGGAAGAGAGAGCGAGGAAAGGGAGAGAGCAATGGCGAGAGTGAGATCGATCAGAAGGTGAAAGGGAGAGAGCAGTGGCCTATCGGATCTGGAGGAAGATGAAAGGGAAAGAAAACCAGGGTGTTTTATTTTTAGAATTGTCGACGCCATAAGTCAGGCGTCGACTAAGGTCACTTTATACCGATGCCATGTATTCCACCATCGGCAAAGACACAAATTTTTTAGGGCGTTGGCATTTTTTCTGTCTGCAAAAGCCCATTTTTGCGGATGGCAATAATCAACAGTCGACAGAAACCCCGATTTGCCGACGGGTAAAAAAGTAGCATCAACAAATACACCTTTCTGCTGACGGGTTAGTATAATAGTGTCGACATATGACCCTCTATGCCGATGCCTCATTTTTCATCGTCGGTATAGAGGGTTATTGTCGACGGTTCTTCGCACCATCGGTATAGTCACAATTTGTTGACGACCTTTTATAACGTCGGCATGACGTCCGTCAGTATAGCTAGATTTTCTTGTAGTGGTCTTCTTTCTTTTTGTTATAATCTATATACTTTAATTGAAGGGGGTAATTTTTTTTGATGAGATAAACAAAAGGTTAAATAGTTAACAAGAAAGAGAGTAGAAGGAGAGGAAATAGAGAAATGATAGGCCATAGATTGAAGTAGGAGAGAGAAAACATGTAAGAGGTAATGAGGTGTAGATAAAAAATAAGAGCATCTTAAACTTTTTTAAGTAAGGGTATTAATACAACTTTTGAAAGTTTATAGGTATTTATGCAACGAGATATTAACAGTTTTTGTTCATATATTAACCGTAAGGGTAATTTTGAACTTTCAACGCTTTCTTAAGGTCTTTCTCTTTGTCTTTCTAGGAGTGTAAAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCAGGAATTCGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCTGTTTGTTGTAAGATCACTAAAGGAAGGATTGGTCATAAATTTGGAGAGTTTGCTTCGACACAGAAACAAAGACTTTCAAGAACAAATATTGGATCGGGAAAAAAAGGGTAA

mRNA sequence

ATGATTAAAGGAGGGGAAGGAATTAGGATTTATTATAAATCCTCCTCGTTGCCGCTCGCTTTCCCGGAAGTTGCACGCTCAGAATCACGCTCTCTCGCCCAGGATCTCGCTCTCTTGCTCGGACTCTCGCTCTTTCGCTCTCTTGCTCGGATTCTCGCTCTCTTGCTCTTGCTCAGAATCTCGCTCTCGGCTACGACTAATTGCTTGCCTGACCGTCAGTCACCGGATCAATATTCCCTAGGTGGTCGGCGATTACTTTGGTTCGTAGGATCGGAGGAAACTGCGAGTTTAGCCACGTTAGGGACTTTTGCGAGAGTTGCGGTGTGGTTAGCCTTATGGATCAACCTTCAGAGGTTGTGTTCCTTTGGGTTCACTAGAGGTTGTGTTCCTTCGGGTACACCAGAGGTTTGCGTTCCTTCGGGATCACCAGAGATCTGGATTTGGGGAGAGCAAAGAGAGGGAGAGACCAACGAGATGGATAGACCGAAGAGAGCAAGAGACCGAGGAGATGGAGACGAGATCGAAGAAACACAGAGAGAAGAGAGGGAGAGAGCAACAAGATGTGAGATCGATGAAAGAGAGAGCGATGGAAGAGAGAGCGATGGAAGAGAGAGCGAAGAGAGGGAGAGGGATCGACGGAAGAGAGACCGATGGAAGAGAGAGCGAGGAAAGGGAGAGAGCAATGGCGAGAGTGAGATCGATCAGAAGGTGAAAGGGAGAGAGCAGCGTCGACTAAGGTCACTTTATACCGATGCCATGTATTCCACCATCGGCAAAGACACAAATTTTTTAGGGCGTTGGCATTTTTTCTGTCTGCAAAAGCCCATTTTTGCGGATGGCAATAATCAACAGTCGACAGAAACCCCGATTTGCCGACGGTGTCGACATATGACCCTCTATGCCGATGCCTCATTTTTCATCGTCGGTATAGAGGGTTATTGTCGACGGTTCTTCGCACCATCGGAATTCGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCTGTTTGTTGTAAGATCACTAAAGGAAGGATTGGTCATAAATTTGGAGAGTTTGCTTCGACACAGAAACAAAGACTTTCAAGAACAAATATTGGATCGGGAAAAAAAGGGTAA

Coding sequence (CDS)

ATGATTAAAGGAGGGGAAGGAATTAGGATTTATTATAAATCCTCCTCGTTGCCGCTCGCTTTCCCGGAAGTTGCACGCTCAGAATCACGCTCTCTCGCCCAGGATCTCGCTCTCTTGCTCGGACTCTCGCTCTTTCGCTCTCTTGCTCGGATTCTCGCTCTCTTGCTCTTGCTCAGAATCTCGCTCTCGGCTACGACTAATTGCTTGCCTGACCGTCAGTCACCGGATCAATATTCCCTAGGTGGTCGGCGATTACTTTGGTTCGTAGGATCGGAGGAAACTGCGAGTTTAGCCACGTTAGGGACTTTTGCGAGAGTTGCGGTGTGGTTAGCCTTATGGATCAACCTTCAGAGGTTGTGTTCCTTTGGGTTCACTAGAGGTTGTGTTCCTTCGGGTACACCAGAGGTTTGCGTTCCTTCGGGATCACCAGAGATCTGGATTTGGGGAGAGCAAAGAGAGGGAGAGACCAACGAGATGGATAGACCGAAGAGAGCAAGAGACCGAGGAGATGGAGACGAGATCGAAGAAACACAGAGAGAAGAGAGGGAGAGAGCAACAAGATGTGAGATCGATGAAAGAGAGAGCGATGGAAGAGAGAGCGATGGAAGAGAGAGCGAAGAGAGGGAGAGGGATCGACGGAAGAGAGACCGATGGAAGAGAGAGCGAGGAAAGGGAGAGAGCAATGGCGAGAGTGAGATCGATCAGAAGGTGAAAGGGAGAGAGCAGCGTCGACTAAGGTCACTTTATACCGATGCCATGTATTCCACCATCGGCAAAGACACAAATTTTTTAGGGCGTTGGCATTTTTTCTGTCTGCAAAAGCCCATTTTTGCGGATGGCAATAATCAACAGTCGACAGAAACCCCGATTTGCCGACGGTGTCGACATATGACCCTCTATGCCGATGCCTCATTTTTCATCGTCGGTATAGAGGGTTATTGTCGACGGTTCTTCGCACCATCGGAATTCGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCTGTTTGTTGTAAGATCACTAAAGGAAGGATTGGTCATAAATTTGGAGAGTTTGCTTCGACACAGAAACAAAGACTTTCAAGAACAAATATTGGATCGGGAAAAAAAGGGTAA

Protein sequence

MIKGGEGIRIYYKSSSLPLAFPEVARSESRSLAQDLALLLGLSLFRSLARILALLLLLRISLSATTNCLPDRQSPDQYSLGGRRLLWFVGSEETASLATLGTFARVAVWLALWINLQRLCSFGFTRGCVPSGTPEVCVPSGSPEIWIWGEQREGETNEMDRPKRARDRGDGDEIEETQREERERATRCEIDERESDGRESDGRESEERERDRRKRDRWKRERGKGESNGESEIDQKVKGREQRRLRSLYTDAMYSTIGKDTNFLGRWHFFCLQKPIFADGNNQQSTETPICRRCRHMTLYADASFFIVGIEGYCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG
Homology
[Close]
BLAST of Cla97C11G215395 vs. NCBI nr
Match: YP_003587230.1 (ribosomal protein S19 [Citrullus lanatus] >ACV96650.1 ribosomal protein S19 [Citrullus lanatus])

HSP 1 Score: 96.3 bits (238), Expect = 6.0e-16
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVDSSVRIYNGKTSV CKIT+GRIGHKFGEFAST+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRIGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. NCBI nr
Match: YP_009913640.1 (ribosomal protein S19 [Luffa acutangula] >YP_009913653.1 ribosomal protein S19 [Luffa acutangula] >QLJ93027.1 ribosomal protein S19 [Luffa acutangula] >QLJ93028.1 ribosomal protein S19 [Luffa acutangula])

HSP 1 Score: 95.9 bits (237), Expect = 7.8e-16
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVDSSVRIYNGKTSV CKIT+GR+GHKFGEFAST+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. NCBI nr
Match: WP_131747057.1 (ribosomal protein S19 family protein [Candidatus Frankia meridionalis])

HSP 1 Score: 92.8 bits (229), Expect = 6.6e-15
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVD SVRIYNGKTSV CKIT+G++GHKFGEFAST+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDCSVRIYNGKTSVRCKITEGKVGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. NCBI nr
Match: YP_003587264.1 (ribosomal protein S19 [Citrullus lanatus] >ACV96651.1 ribosomal protein S19 [Citrullus lanatus])

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-14
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVDSSVRIYNGKT V CKIT+GR+GHKFGEFA T+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. NCBI nr
Match: YP_003587380.1 (ribosomal protein S19 [Cucurbita pepo] >ACV96694.1 ribosomal protein S19 [Cucurbita pepo])

HSP 1 Score: 89.0 bits (219), Expect = 9.6e-14
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKK 372
           + RR     EFVDSSVRIYNGKT V CKIT+GR+GHKFGEFA T+K+RLSRTNIG GKK
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKK 90

[Close]
BLAST of Cla97C11G215395 vs. ExPASy Swiss-Prot
Match: P27527 (Ribosomal protein S19, mitochondrial OS=Petunia hybrida OX=4102 GN=RPS19 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 7.6e-14
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKK 372
           + RR     EFVD  VRIYNGKT V CKIT+G++GHKFGEFA T+K+R SRTNIG G+K
Sbjct: 32  WSRRSSILPEFVDCFVRIYNGKTFVRCKITEGKVGHKFGEFAFTRKRRPSRTNIGPGRK 90

[Close]
BLAST of Cla97C11G215395 vs. ExPASy Swiss-Prot
Match: P39697 (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS19 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-09
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQK 359
           + RR     E+VDS+VRIYNGKT V CKIT+G++GHKFGEFA T+K
Sbjct: 159 WSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRK 204

[Close]
BLAST of Cla97C11G215395 vs. ExPASy TrEMBL
Match: D5I3A0 (Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-1 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-16
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVDSSVRIYNGKTSV CKIT+GRIGHKFGEFAST+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRIGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. ExPASy TrEMBL
Match: A0A7D6C0E4 (Ribosomal protein S19 OS=Luffa acutangula OX=56866 GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-16
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVDSSVRIYNGKTSV CKIT+GR+GHKFGEFAST+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. ExPASy TrEMBL
Match: D5I3D4 (Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.3e-15
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKKG 372
           + RR     EFVDSSVRIYNGKT V CKIT+GR+GHKFGEFA T+K+RLSRTNIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of Cla97C11G215395 vs. ExPASy TrEMBL
Match: D5I3F0 (Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-1 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-14
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKK 372
           + RR     EFVDSSVRIYNGKT V CKIT+GR+GHKFGEFA T+K+RLSRTNIG GKK
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKK 90

[Close]
BLAST of Cla97C11G215395 vs. ExPASy TrEMBL
Match: D5I3G6 (Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-14
Identity = 44/59 (74.58%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQKQRLSRTNIGSGKK 372
           + RR     EFVDSSVRIYNGKT V CKIT+GR+GHKFGEFA T+K+RLSRTNIG GKK
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKK 90

[Close]
BLAST of Cla97C11G215395 vs. TAIR 10
Match: AT5G47320.1 (ribosomal protein S19 )

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-10
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 313 YCRRFFAPSEFVDSSVRIYNGKTSVCCKITKGRIGHKFGEFASTQK 359
           + RR     E+VDS+VRIYNGKT V CKIT+G++GHKFGEFA T+K
Sbjct: 159 WSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRK 204

The following BLAST results are available for this feature:
BLAST of Cla97C11G215395 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_003587230.16.0e-1680.00ribosomal protein S19 [Citrullus lanatus] >ACV96650.1 ribosomal protein S19 [Cit... [more]
YP_009913640.17.8e-1678.33ribosomal protein S19 [Luffa acutangula] >YP_009913653.1 ribosomal protein S19 [... [more]
WP_131747057.16.6e-1575.00ribosomal protein S19 family protein [Candidatus Frankia meridionalis][more]
YP_003587264.11.9e-1475.00ribosomal protein S19 [Citrullus lanatus] >ACV96651.1 ribosomal protein S19 [Cit... [more]
YP_003587380.19.6e-1474.58ribosomal protein S19 [Cucurbita pepo] >ACV96694.1 ribosomal protein S19 [Cucurb... [more]
BLAST of Cla97C11G215395 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P275277.6e-1466.10Ribosomal protein S19, mitochondrial OS=Petunia hybrida OX=4102 GN=RPS19 PE=2 SV... [more]
P396971.5e-0965.2240S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS1... [more]
BLAST of Cla97C11G215395 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
D5I3A02.9e-1680.00Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-1 PE=3 SV=1[more]
A0A7D6C0E43.8e-1678.33Ribosomal protein S19 OS=Luffa acutangula OX=56866 GN=rps19-2 PE=3 SV=1[more]
D5I3D49.3e-1575.00Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-2 PE=3 SV=1[more]
D5I3F04.6e-1474.58Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-1 PE=3 SV=1[more]
D5I3G64.6e-1474.58Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-2 PE=3 SV=1[more]
BLAST of Cla97C11G215395 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47320.11.1e-1065.22ribosomal protein S19 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 310..359
e-value: 1.5E-10
score: 40.8
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 313..366
IPR023575Ribosomal protein S19/S15, superfamilyGENE3D3.30.860.1030s Ribosomal Protein S19; Chain Acoord: 281..368
e-value: 3.7E-11
score: 44.8
IPR023575Ribosomal protein S19/S15, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 311..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..240
NoneNo IPR availablePANTHERPTHR11880:SF3640S RIBOSOMAL PROTEIN S19, MITOCHONDRIALcoord: 313..366
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 332..356

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G215395.1Cla97C11G215395.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome