Cla97C11G215050 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G215050
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 11031828 .. 11035540 (+)
RNA-Seq ExpressionCla97C11G215050
SyntenyCla97C11G215050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCTGTTTCTTTCTCGACGCATGGTCTCAACGCATAGGCTCGACGCATGGGTTTCCATTTGTTCTCGCAGCAGCTTCATCTCTTCGTACTTGGTTGTTTGCGCTTCTTTTCTTCTTAACCCTGCATTAGGAACAGAAAAGCTCATCGTTTTTCAGGTATTTTCTTTTGTAAATAGTGCCAACGCATGGTGATACATTTTTCATCATTCAACTACCAAAATCATGCGTTTAGCTCCAAAGTTACTCTAATTAAATAAAATAGTGACTATAATAACTCTTATTTCTACAAATTATCAGTTACTCACTGAGCTGTTAGCTCACCCTTTTTATATGTTTTCCATTTTCAGGTAGCATGACAGTTCCCGTTGCCGATCGAAGTTGAGGTTTGTCAAGAGTATGTTAATGGTATTACCGTCCTAGAAAAGTTTTATATGAAAATGTGATGAATGTGACAGTGGGTTATGTGACAGGGTAGTCGGTAATTACTGTCCTCACACTCCGTCTCGGGCTACGAGAGGATAGTTCGGGGTGGGGTGTGATACTTTTAATCTGGGTGGCCGTTTTGGGAATACGACCACTCGTTTCCTTCGTTTTTCCACCCTTTATCCATCTACAACATTAGTTTTTAGGTTTTCTTTCATCTTCTTCTTGTAATCAAGCAAAAAGGATGAGTTCTATCTTTTCCACCACCATGGGAAGGTAAGATCTATATAGTTTTCTAGTTTAGAGAATTTTGGAGGAACTCATTGCATTCTTGGGAGTATTTTGATAATATGATTGATTTTTCTTGTCTATGGGTTTTACTCTTAATTTATTGATTATATGACATTTTCTTGCTATTGATTGACAACCAATATTTGATTGTGCCATTCAAGCGCTTTAGATTAACATATAATATGTGACATGTAATTATAGGTTAATCCCTAAGAAACCAAATATTAGATAGGCTTGTGATTTGTGGTCGACAACGAAGAGCATTGTTTTATCGACCTTGGGGAAACCGTATTAAATTTCTAATTAGGCCTTTCCAATTGAAAATTTATCCTAGCATAATCCCTAAGGCGTAATGCGGTTAGTTAAACTGATTAGGATGCTTTTCATCTAATCAAATTGGTTAATTTGATGCTTTGGACCATTGGTTAGCCTTTCTAATCAATCTAGCTAGGCATAGGTAAGAAGTTAAAATCATGTATTGATAATTCGATGATCAAAATTACATTGGGTGATTCCGTTTCTCTAAGCTAGAATGTTTTGTTTGATTGCACATCTATCATTTACTTTCCTTGCACTTTATTTTCATGCATATTCAAATCTCAAACCACACAAGCCCTCCCCCCCCCCCCCCCCCCCCCAATTTGTTGCTTTAACTAAATGGTTGAGAAACTAATCTTTGTGCTTCCTTGCGAATCGACTCGATCTTGCCACTAGTACTACGTTTTAGTAGTAATAGTTGTAAAGATCATTATAATTATAAATATTATTTGATTGGGTCTTTTGGAAGCGACACCAAAAAGCTTCACATCATGGTTATACCTAATGGAGGCTCGTCTATTTGATTTTCTATTTATGGATGGTTCTTCGAGTTGGCCGTGCGTTTTGTGGGAGTTCTTGGAGCTTTTTGGTTTCGTTCAGGAGGTTAGTCCTAGAGTGGGGTGTGAGGATAGATGGGCGTGGGTTCTGGGGGGTTCTGACTAGTTTTTTGTTAGGAGTTATTGGGAGGCTTTGCGTCCTAGGTGGGGGAAGGGAGGTTAGAGTGTCTTGGGATCATTTGCTTTGGTTTGGGGGTAATATTCCTTGGCATTCTTTCTATGCTTGGTTAGCTGTGAGAGATAGGTTAGGTACTAGGGATTGGTTATATCGTTGGGGTGAGGTTTCATCGTTTGAGTGCTTGTTATACGTGGGTGGGGGTTGAGTCGTGTGACCCCTTATTTTTTTAGTATGCCTTTGGGTGTGAGGTGCGGGCTGGGGTTTTCCGTCTTAGGTTTCCTCCCATAGGGTGGCTGGGTGGGGTGTGGAGTTGGAGTGAGTTTTTCAGGTTGGGATTGGGAAAAGGTTAAAAAGAAACTGTGGCATACTTTCTGGTGTATTGTTATCTATTTTATTTGGCAGGAGAGGAATCATCATTTGCATGGTGGCTCCCCTCGTGCTGCTTCTCTAATCTTGCATCTCATTCCTTTAGTTGTTCGTGCGCGTGCTGTTTCGTGGTTGAAAGATCTTTCTGGCTTGCTTTAGTTTAGTTTTGTTTCCTTATGTTTTTTTTTTTATGTTGGTTGTGCTCTTCCCCTGGCATTTTGCCTTCTCTTTTGTGCTTGTCCCCAGGTTGTGGGGTTTTGTTTATGCTTTGTCTCGTGTTGTGGGGTTGTTCGTTCGTCTGGTTGGTTGGTCTTTTCTCGTGCTTTGGTTTTTTGGTTTTTCATTGTTCTCTGGCCCTCTGCTGTGGGGTCGTTGCTTTGGCTTCTTTGTTTGGTTTTTGTTGGGTTTATTGTTCTTTGTGGTCCTGGTGCCTTGGGGTTTAAGTAGTTTGGTTGTTCTCCCTTTGGTGTTTTGGTTTCCTTTGTGCTCTTTCCTATGTGTCTTAGCCTTGGGCTGTGGGGTCCTTATTGTTGTATAACTTTTCAAAAAAAAAAAAAAAAGAGTGAGCTGCAACTTCAAGTTGGGGGCCAAACACCCGCTTAATGACATCGGGCAGTACTAAAAAAACTAGTTAGATTTAGTCTCTCAAAGTTATTTTTTTTATTAAAATTGGTTAAATAATAATAGTAATTTTCATGTAAGAAAATACTATAGGCAAAAATGTTTTCAAAATTTATAATAGAAATGCTAATGGATAACAAACCGTTTTTTAAACAATCAACAATAAAGGGCTAATAGGTCATGAATTCAATCTATGGTAGTCAAATCCTAATGTTAGTCGAGGTGCTTATAAACTAGTCTTAACACCTACTGATAAAAAAAAAAACTAGATTTAAGATTTTACTGGAAATACACGGATTAAATTAGACAATTATAAGGCTACCTGAACAACCTTCCAAGTATAATGATATATATTTAAGAAAACTAAATTGTAAAATACAATTTTTTTTAGGAAAAAGAATAGTCGGAAAATAGAAAAAGTAAGAAACACCGAAAAATCCATTTTCCCCCGCCCCATGTTCAACCTCTCTGCTCCCATTTTTCTTCTCATATAAAACCCATCACTATCCATTAGTTGGTTCTCAATTTGTTCTCCGATTTTGACCGGTAAGCTTCCTCCTGAATCTCTAAAATTTTGTTTCTCGGTTACCCTTTCCTCAAATCATTATGTTACCCCGATTTTAGATTGCGAATTTGTATTCGTCGATCCGAATTGAGACCCAACAAAGTTTCGAATCTCCATTCGATTCAGCGAAGAGGCGATTTCTGCTCTAGCTTGGAGACCCGCGGGTTAGAATTCGATTTTTATTTTCAAAATTTTGAGCTGATTGATTCTTGAACCGTCTGTTGCCGAAAGTGCTCGTTTGATGATCCGATTTGTTGTTGTCAATTTGCTCGCCAATTTCTTATGTCCTTGGGTTTGGAAGAGGATTTCGTGCTTTTAATATTTGCTGGATTTCATTAGGGCTTATCTAGAATGTGTTTCCATGGTTTTTGTGGTGAAACGAAAATATAGTTTGTTGTTCTTTTCCATGATTATTGTTCGAATGCGTAATTTCTCCGTGTTTATACATTAG

mRNA sequence

ATGCGTCTGTTTCTTTCTCGACGCATGGTCTCAACGCATAGGCTCGACGCATGGGTTTCCATTTGTTCTCGCAGCAGCTTCATCTCTTCGTACTTGGTTGTTTGCGCTTCTTTTCTTCTTAACCCTGCATTAGGAACAGAAAAGCTCATCGTTTTTCAGTTGGTTCTCAATTTGTTCTCCGATTTTGACCGATTGCGAATTTGTATTCGTCGATCCGAATTGAGACCCAACAAAGTTTCGAATCTCCATTCGATTCAGCGAAGAGGCGATTTCTGCTCTAGCTTGGAGACCCGCGGGGCTTATCTAGAATGTGTTTCCATGGTTTTTGTGGTGAAACGAAAATATAGTTTGTTGTTCTTTTCCATGATTATTGTTCGAATGCGTAATTTCTCCGTGTTTATACATTAG

Coding sequence (CDS)

ATGCGTCTGTTTCTTTCTCGACGCATGGTCTCAACGCATAGGCTCGACGCATGGGTTTCCATTTGTTCTCGCAGCAGCTTCATCTCTTCGTACTTGGTTGTTTGCGCTTCTTTTCTTCTTAACCCTGCATTAGGAACAGAAAAGCTCATCGTTTTTCAGTTGGTTCTCAATTTGTTCTCCGATTTTGACCGATTGCGAATTTGTATTCGTCGATCCGAATTGAGACCCAACAAAGTTTCGAATCTCCATTCGATTCAGCGAAGAGGCGATTTCTGCTCTAGCTTGGAGACCCGCGGGGCTTATCTAGAATGTGTTTCCATGGTTTTTGTGGTGAAACGAAAATATAGTTTGTTGTTCTTTTCCATGATTATTGTTCGAATGCGTAATTTCTCCGTGTTTATACATTAG

Protein sequence

MRLFLSRRMVSTHRLDAWVSICSRSSFISSYLVVCASFLLNPALGTEKLIVFQLVLNLFSDFDRLRICIRRSELRPNKVSNLHSIQRRGDFCSSLETRGAYLECVSMVFVVKRKYSLLFFSMIIVRMRNFSVFIH
Homology
[Close]
BLAST of Cla97C11G215050 vs. NCBI nr
Match: KAE8646071.1 (hypothetical protein Csa_016045, partial [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 44  LGTEKLIVFQLVLNLFSDFDRLRICIRRSELRPNKVSNLHSIQRRGDFCSSLETRG 100
           L  + + +  LVLNLFSDFDRLR CI RSELR N+VSNLH IQR G FCSSLET G
Sbjct: 25  LHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRVSNLHLIQRGGGFCSSLETCG 80

[Close]
BLAST of Cla97C11G215050 vs. ExPASy TrEMBL
Match: A0A0A0K7A2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219820 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.6e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 44  LGTEKLIVFQLVLNLFSDFDRLRICIRRSELRPNKVSNLHSIQRRGDFCSSLETRG 100
           L  + + +  LVLNLFSDFDRLR CI RSELR N+VSNLH IQR G FCSSLET G
Sbjct: 25  LHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRVSNLHLIQRGGGFCSSLETCG 80

The following BLAST results are available for this feature:
BLAST of Cla97C11G215050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646071.11.4e-1069.64hypothetical protein Csa_016045, partial [Cucumis sativus][more]
BLAST of Cla97C11G215050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G215050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7A26.6e-1169.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219820 PE=4 SV=1[more]
BLAST of Cla97C11G215050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G215050.1Cla97C11G215050.1mRNA