Cla97C11G214430 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G214430
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionNADH-plastoquinone oxidoreductase subunit K
LocationCla97Chr11: 7802821 .. 7803844 (-)
RNA-Seq ExpressionCla97C11G214430
SyntenyCla97C11G214430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCCCCTCTTCCGGGTCCATCACAAGGGAAACGAAAACCAAGATTTGCTTTATCCGGTATCAAACGCGAGCTACGAGAAAATAGAACACCTTTCAGGAGTATCAATACCGTTACATGAATCGTAAATGCATGAATATGATGTACCAAAAAATCTGCGGCCCCCGTTTTAGTAGTTTTATTACTGTTCGTGTCAGCCTCAATATTGATCCAGGCTCGAATATCGGCCTTATTTTTAAGACAAAAATGCAGCATTCTCCAATCAAAATATTTTCTATCCGGATTTTTTCCCAGATCTATAATATCATCTTCGACTAGATAATTATTGATCGGAGTATTGCAACTAATAAATAGTTGCTCGTTCATAAATTCAGTTGACCACTTGTTAGTCTTGCTACACTACACGACACGAGTGACGGGTGAAGTTGAAGCAGACACGGTCGACGTTCAGTCGACTTCACAAGTGATTCAACATACCATATGGAAATAATCAAAAAAGGAGAGAAGGGTCTCGCCCAGGTGGCTCCCGCAAGGTAACGACTTCAAACTCAAACAAAGAACGTTCTTCTCCAAGGCATGAGTCAAAGAAAATGCTGTATGTATCTAATGCAAGACCCGTCGATAAGCTAAGGCTACGACATGAAGGAAGGCGAAGAAGTCCATTCGATTTTTGTTTCGAACCCTGACCAAATCCTCCCACATTAGGATTACTCGTTAATGGTTGATCAAGTTTGATAGATTCGCCCTCTGAAACAAGAAGTTCTGGTCCTGGAGGGATAATATCAACCACTTGACGCCCATTCGCTGCATCCACTATGGTTATTTCATATCCTCCTTTTTCTTTTCGAGAAGTCAGCTGCCTCTCTTCTTCTTCTTCCTCTGTTTCAGGCGTGGGCAGAGCTTTTTATGTCTACCCTATTCGGTTTCTTGATTCCGAGACGAACTCCACCGCATCTTTCTCATGCCGTTTCTCCTTCTCAAAACTATCTTCCCCACTGTGTCCAGGCAAACTCTGAATACTAG

mRNA sequence

ATGTACCCCCTCTTCCGGGTCCATCACAAGGGAAACGAAAACCAAGATTTGCTTTATCCGGTATCAAACGCGAGCTACGAGAAAATAGAACACCTTTCAGGAGTATCAATACCGTTACATGAATCGAGAGAAGGGTCTCGCCCAGGTGGCTCCCGCAAGGTAACGACTTCAAACTCAAACAAAGAACGTTCTTCTCCAAGGCATGAGTCAAAGAAAATGCTGTATGCGTGGGCAGAGCTTTTTATGTCTACCCTATTCGGTTTCTTGATTCCGAGACGAACTCCACCGCATCTTTCTCATGCCGTTTCTCCTTCTCAAAACTATCTTCCCCACTGTGTCCAGGCAAACTCTGAATACTAG

Coding sequence (CDS)

ATGTACCCCCTCTTCCGGGTCCATCACAAGGGAAACGAAAACCAAGATTTGCTTTATCCGGTATCAAACGCGAGCTACGAGAAAATAGAACACCTTTCAGGAGTATCAATACCGTTACATGAATCGAGAGAAGGGTCTCGCCCAGGTGGCTCCCGCAAGGTAACGACTTCAAACTCAAACAAAGAACGTTCTTCTCCAAGGCATGAGTCAAAGAAAATGCTGTATGCGTGGGCAGAGCTTTTTATGTCTACCCTATTCGGTTTCTTGATTCCGAGACGAACTCCACCGCATCTTTCTCATGCCGTTTCTCCTTCTCAAAACTATCTTCCCCACTGTGTCCAGGCAAACTCTGAATACTAG

Protein sequence

MYPLFRVHHKGNENQDLLYPVSNASYEKIEHLSGVSIPLHESREGSRPGGSRKVTTSNSNKERSSPRHESKKMLYAWAELFMSTLFGFLIPRRTPPHLSHAVSPSQNYLPHCVQANSEY
Homology
[Close]
BLAST of Cla97C11G214430 vs. NCBI nr
Match: QBC71773.1 (NADH-plastoquinone oxidoreductase subunit K [Dionaea muscipula])

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-09
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 1  MYPLFRVHHKGNENQDLLYPVSNASYEKIEHLSGVSIPLHE 42
          MY LFRVHHKGNENQDLLYPVSN +YE+IEHLS  S+P HE
Sbjct: 1  MYLLFRVHHKGNENQDLLYPVSNENYEQIEHLSKGSVPSHE 41

[Close]
BLAST of Cla97C11G214430 vs. NCBI nr
Match: RWO33940.1 (hypothetical protein EOS11_34020, partial [Mesorhizobium sp.])

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 233 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 265

[Close]
BLAST of Cla97C11G214430 vs. NCBI nr
Match: RWB92700.1 (hypothetical protein EOQ56_37150 [Mesorhizobium sp.] >RWC21559.1 hypothetical protein EOS27_33400 [Mesorhizobium sp.] >RWC37428.1 hypothetical protein EOS28_32600 [Mesorhizobium sp.] >RWC37700.1 hypothetical protein EOS55_32085 [Mesorhizobium sp.] >RWC67569.1 hypothetical protein EOS71_31975 [Mesorhizobium sp.])

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 220 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 252

[Close]
BLAST of Cla97C11G214430 vs. NCBI nr
Match: RWN45624.1 (hypothetical protein EOR98_36800, partial [Mesorhizobium sp.] >TJV95946.1 hypothetical protein E5W97_33000, partial [Mesorhizobium sp.])

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 252 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 284

[Close]
BLAST of Cla97C11G214430 vs. NCBI nr
Match: RWC98921.1 (hypothetical protein EOS58_32640, partial [Mesorhizobium sp.] >TJW72019.1 hypothetical protein E5V92_33035, partial [Mesorhizobium sp.])

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 244 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 276

[Close]
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match: A0A411K341 (NADH-plastoquinone oxidoreductase subunit K OS=Dionaea muscipula OX=4362 GN=ndhK PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 1  MYPLFRVHHKGNENQDLLYPVSNASYEKIEHLSGVSIPLHE 42
          MY LFRVHHKGNENQDLLYPVSN +YE+IEHLS  S+P HE
Sbjct: 1  MYLLFRVHHKGNENQDLLYPVSNENYEQIEHLSKGSVPSHE 41

[Close]
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match: A0A3S3JJ45 (Uncharacterized protein OS=Mesorhizobium sp. OX=1871066 GN=E5V49_18460 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 220 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 252

[Close]
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match: A0A439XWQ3 (Uncharacterized protein (Fragment) OS=Mesorhizobium sp. OX=1871066 GN=E5V92_33035 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 244 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 276

[Close]
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match: A0A442V5U7 (Uncharacterized protein (Fragment) OS=Mesorhizobium sp. OX=1871066 GN=EOS11_34020 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 43  REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 76
           REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY
Sbjct: 233 REGSRPGGSRKVTTSNSNKERSSPRHESKKMLY 265

[Close]
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match: A0A6B9XR79 (NADH-plastoquinone oxidoreductase subunit K OS=Dendrobium pseudotenellum OX=1354200 GN=ndhK PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 1  MYPLFRVHHKGNENQDLLYPVSNASYEKIEHLSGVSIPLHE 42
          M P ++VHHKGNENQDLLY VSN + E+IEH S VSI  HE
Sbjct: 1  MSPPYQVHHKGNENQDLLYQVSNGNCEQIEHPSVVSIQSHE 41

The following BLAST results are available for this feature:
BLAST of Cla97C11G214430 vs. NCBI nr
Match NameE-valueIdentityDescription
QBC71773.12.3e-0980.49NADH-plastoquinone oxidoreductase subunit K [Dionaea muscipula][more]
RWO33940.12.8e-07100.00hypothetical protein EOS11_34020, partial [Mesorhizobium sp.][more]
RWB92700.12.8e-07100.00hypothetical protein EOQ56_37150 [Mesorhizobium sp.] >RWC21559.1 hypothetical pr... [more]
RWN45624.12.8e-07100.00hypothetical protein EOR98_36800, partial [Mesorhizobium sp.] >TJV95946.1 hypoth... [more]
RWC98921.12.8e-07100.00hypothetical protein EOS58_32640, partial [Mesorhizobium sp.] >TJW72019.1 hypoth... [more]
BLAST of Cla97C11G214430 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A411K3411.1e-0980.49NADH-plastoquinone oxidoreductase subunit K OS=Dionaea muscipula OX=4362 GN=ndhK... [more]
A0A3S3JJ451.3e-07100.00Uncharacterized protein OS=Mesorhizobium sp. OX=1871066 GN=E5V49_18460 PE=4 SV=1[more]
A0A439XWQ31.3e-07100.00Uncharacterized protein (Fragment) OS=Mesorhizobium sp. OX=1871066 GN=E5V92_3303... [more]
A0A442V5U71.3e-07100.00Uncharacterized protein (Fragment) OS=Mesorhizobium sp. OX=1871066 GN=EOS11_3402... [more]
A0A6B9XR792.1e-0568.29NADH-plastoquinone oxidoreductase subunit K OS=Dendrobium pseudotenellum OX=1354... [more]
BLAST of Cla97C11G214430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G214430.1Cla97C11G214430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009536 plastid