Cla97C11G214400 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G214400
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	PEP
Location	Cla97Chr11: 7785744 .. 7785973 (-)
RNA-Seq Expression	Cla97C11G214400
Synteny	Cla97C11G214400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCATACCAAAAATCCCCAAGGAATTCCAAGAATTCTTGTTATACGCTCGTTCCAACCCTCAATTCTCTTTTCTAGGCTCATCGATATTGAATCAATCGAACGCACTTCTAATACTTGTTACTAATAGAGTCTAGCCTATGTTCTTCTTTAGATCCCTTGTTTCACTCCGATAGTATCATAAATCGAGTCAATGCAGAGGAAATGAATGCATTTTCATACTATTAA

mRNA sequence

ATGGATCATACCAAAAATCCCCAAGGAATTCCAAGAATTCTTGTTATACGCTCGTTCCAACCCTCAATTCTCTTTTCTAGGCTCATCGATATTGAATCAATCGAACGCACTTCTAATACTTATCCCTTGTTTCACTCCGATAGTATCATAAATCGAGTCAATGCAGAGGAAATGAATGCATTTTCATACTATTAA

Coding sequence (CDS)

ATGGATCATACCAAAAATCCCCAAGGAATTCCAAGAATTCTTGTTATACGCTCGTTCCAACCCTCAATTCTCTTTTCTAGGCTCATCGATATTGAATCAATCGAACGCACTTCTAATACTTATCCCTTGTTTCACTCCGATAGTATCATAAATCGAGTCAATGCAGAGGAAATGAATGCATTTTCATACTATTAA

Protein sequence

MDHTKNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIINRVNAEEMNAFSYY

Homology

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BLAST of Cla97C11G214400 vs. NCBI nr
Match: KAG8499170.1 (hypothetical protein CXB51_005612 [Gossypium anomalum])

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-08
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 6  NPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIIN 52
          NPQGIPRILVI SFQPSILFSR IDIESIERTSNT   F    +I+
Sbjct: 11 NPQGIPRILVIHSFQPSILFSRFIDIESIERTSNTCSTFGRPYVIS 56

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BLAST of Cla97C11G214400 vs. NCBI nr
Match: KAF1862722.1 (hypothetical protein Lal_00044950 [Lupinus albus])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 5   KNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIIN 52
           KNPQGIPRILVIRSFQ S LFSR +DIESIERTSNT   F    +I+
Sbjct: 95  KNPQGIPRILVIRSFQVSTLFSRFMDIESIERTSNTCSTFGRPCVIS 141

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BLAST of Cla97C11G214400 vs. NCBI nr
Match: TYH80164.1 (hypothetical protein ES332_D03G113100v1 [Gossypium tomentosum])

HSP 1 Score: 64.3 bits (155), Expect = 4.3e-07
Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 6  NPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSII 51
          NPQGIPRILVI SFQPSILFSR I IESI+RTSNT   F    II
Sbjct: 17 NPQGIPRILVIHSFQPSILFSRFIKIESIKRTSNTCSTFGRPCII 61

[Close]

BLAST of Cla97C11G214400 vs. NCBI nr
Match: PNT08322.1 (hypothetical protein POPTR_013G142500, partial [Populus trichocarpa])

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 33/47 (70.21%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 5  KNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIIN 52
          KNPQGIP ILVI SFQ S LFSR IDIESIERTSNT   F    +I+
Sbjct: 6  KNPQGIPTILVIHSFQFSTLFSRFIDIESIERTSNTCSTFGRPCVIS 52

[Close]

BLAST of Cla97C11G214400 vs. NCBI nr
Match: KAG8635788.1 (hypothetical protein MANES_16G066575v8 [Manihot esculenta])

HSP 1 Score: 60.8 bits (146), Expect = 4.8e-06
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 5  KNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIINRVNA 56
          KN QGI RILVI SFQPS LFSR IDI SIERTSNT   F    +I+ V++
Sbjct: 8  KNSQGISRILVIHSFQPSTLFSRFIDIASIERTSNTCFTFGRPCVISPVDS 58

[Close]

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL
Match: A0A6A5LVQ7 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00044950 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-08
Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 5   KNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIIN 52
           KNPQGIPRILVIRSFQ S LFSR +DIESIERTSNT   F    +I+
Sbjct: 95  KNPQGIPRILVIRSFQVSTLFSRFMDIESIERTSNTCSTFGRPCVIS 141

[Close]

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL
Match: A0A5D2LND4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G113100v1 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-07
Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 6  NPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSII 51
          NPQGIPRILVI SFQPSILFSR I IESI+RTSNT   F    II
Sbjct: 17 NPQGIPRILVIHSFQPSILFSRFIKIESIKRTSNTCSTFGRPCII 61

[Close]

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL
Match: A0A2K1Y5P7 (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_013G142500 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-07
Identity = 33/47 (70.21%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 5  KNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIIN 52
          KNPQGIP ILVI SFQ S LFSR IDIESIERTSNT   F    +I+
Sbjct: 6  KNPQGIPTILVIHSFQFSTLFSRFIDIESIERTSNTCSTFGRPCVIS 52

[Close]

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL
Match: A0A2C9U9I7 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G065200 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-06
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 5  KNPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIINRVNA 56
          KN QGI RILVI SFQPS LFSR IDI SIERTSNT   F    +I+ V++
Sbjct: 9  KNSQGISRILVIHSFQPSTLFSRFIDIASIERTSNTCFTFGRPCVISPVDS 59

[Close]

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL
Match: A0A445DHU6 (PEP OS=Arachis hypogaea OX=3818 GN=Ahy_A04g020508 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-06
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 6   NPQGIPRILVIRSFQPSILFSRLIDIESIERTSNTYPLFHSDSIIN 52
           NPQG+PRILVI SFQ S LF RLIDIESIERTSNT   F    +I+
Sbjct: 153 NPQGMPRILVICSFQASTLFPRLIDIESIERTSNTCSTFGRPWVIS 198

The following BLAST results are available for this feature:

BLAST of Cla97C11G214400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8499170.1	3.0e-08	76.09	hypothetical protein CXB51_005612 [Gossypium anomalum]	[more]
KAF1862722.1	1.1e-07	72.34	hypothetical protein Lal_00044950 [Lupinus albus]	[more]
TYH80164.1	4.3e-07	75.56	hypothetical protein ES332_D03G113100v1 [Gossypium tomentosum]	[more]
PNT08322.1	1.6e-06	70.21	hypothetical protein POPTR_013G142500, partial [Populus trichocarpa]	[more]
KAG8635788.1	4.8e-06	64.71	hypothetical protein MANES_16G066575v8 [Manihot esculenta]	[more]

BLAST of Cla97C11G214400 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5LVQ7	5.5e-08	72.34	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00044950 PE=4 SV=1	[more]
A0A5D2LND4	2.1e-07	75.56	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G113100v1 P...	[more]
A0A2K1Y5P7	8.0e-07	70.21	Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_013G1...	[more]
A0A2C9U9I7	2.3e-06	64.71	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G065200 PE=4 SV=...	[more]
A0A445DHU6	4.0e-06	69.57	PEP OS=Arachis hypogaea OX=3818 GN=Ahy_A04g020508 PE=3 SV=1	[more]

BLAST of Cla97C11G214400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G214400.1	Cla97C11G214400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0097159	organic cyclic compound binding