Cla97C11G214375 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G214375
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description50S ribosomal protein L2, chloroplastic
LocationCla97Chr11: 7765333 .. 7768617 (+)
RNA-Seq ExpressionCla97C11G214375
SyntenyCla97C11G214375
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTGAAACAAACCTTACAACGTTACAAAGAACTGCGGGACATTATAGCTATCCTTGGGTTAGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCACGAGCACGAAAAATTGAGCCTTTCTTATCACAACCAAGTAAAGAGATATATTCATTGATAAGAAAAAGAAAAAATGTGAACGGTGATTGGATTGATGATAAAATCGAATCCTGGGTCTCGAACAGTGATTTGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTAACGACAGAAAAAAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGGTTATCAAATGATTGAACAACCGGGAGTAATTTACTTACGATACTTAGTTGACATTCATAAAAAAGTATCTAATGCTGTCCCCGTTGTTACAAACATACAATTCATGGGGAGATAAAGAAATAGATCGAACCGATCGTCTGTGTGTCACCCTTTTCCAATGCAAGGAAGATTAAAAATTACATATATTAGACATATTTTCGATTTAAATATAAACAAACCAAATCCTATTTCTTAATTCTGAGCCTTTTCTTATCTCCTTTGCAGGAAGCTCTACAGGCCTCGCGCTCCAAACTGATGGCGTCTCGACGTTCTCCTTGACGCCGTCCGTCCTGGCGCTCTCCCCCTTTCCTTTAATAAGTTTGTAAAAAGGCGGACTTTGGCTGACTAGAAAGCAAACCTGGTGCTAGAACCTTGTTCAGAGATGTCTTTGCTGGGATTGACCCAGATTTGGACGCTCAAGTAGAATTTGGGGCATTCCAAAAACTTGGAGATCCAACTACAAAAAGAGTCTAGTCTGATACAAGATTGCTCTGTTCCTTTTTTCCTTTATTTTTTGATTTGACATAGATAGGGGTAGCGGATAAATCTTGATTCGGATTGCCGACTTTTCGTTTCTTTGACTCTTGTCTTGGTCTTTTTTTTATCCGTAAAAAGATCCCAACTAAACAGGTATGGAAGCTATAATTGTAAACCGAAATCAAATCTATGGAAGCATTGGTTTATACATTCCTCTTAGTCTCGACTCTAGGAATAATTTTTTTCGCTATCTTTTTTCGCGAACCGCCTAAAGTTCCAACTAAAAAGGCGAAATGATTTCTCATTATCTCAATTGAAGTAATGAGCCTCACAATATTGTGAGGCTCATTACTTCAACTAGTCCCCGTGTTCCTCGAATGGATCTCTTAGTTGTTGAGAGGGTTGCCCAAAAGCAATATATAAGGCATACCCAGTAAAACTTACAAGTAAACCAGATATAGAGATGGCAACTAGGGTTGCTGTTTCCATTATTATATAATTTCAAGACCACAATGGATCTATGATAAGATCATTTATTTACAACGGAATGGTATACAAAGTCAACAGATCTCACTGAATTAAAAAAAAAATAGGATTATTTATGGCTACACAAACCGTTGACGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGCCATTTAGGATTAGGAATAGGCGTAATCGGACCTGTTTTTTACATATCTCTGGTTATTTGGGACCCTATTCATCTCTTTGGGCTTTTATTGAATCGAGAAATAGGTTTGATTGTCCATCTTTTTGATATAATAGTAAGGCCAGCAACAAGCGAGAATGGCTAGGTTGATAGCTGGGTTAAAGAAAAGGCGAGTATGAAAAGACATATCGCGTAACTGTCCCTGTAAGCAGCTGAATTCTTTCTTGATCTATGAACCGACTTTATGAAAAAATCAGTCTTTCGGCTGAAAAACAGTGTGACTGTTGGGCCTCCCAGTTATATGATCAACGGGATCAGTCGTCCCTCGAGCGGGGCTCTTTTTCTTCCGGGAAGGCAAAGTCGTCAGACAATGTTGAAGGCAAGTAAAGCACTAAGACAAAGCAGCAATAAGACAAGTTTAAGACAACCGGCGGAAAGGGCAAGTAATGGCACCTTAGAAAAGGCGGGGGTATACCCTGAAACACAAAGCTTCAAGGCGACACTCTACCGCTGAGTTATATCCCTTCCCTTGCCCACCCCTCTTTCTTATTATTAGTAAGATAGGGTTCCAGTACACAAACAAGGTGGGTTGGGGTTTCTTTCTCAATCTTTCTCTGATTCTAGCCGTGTAGTGGATCCGGCTTTAGTCGGTTAAAAAGAGGTGTGTGTGGCCGGGCTTCTTTCTTTATAGTGCTGCCTGCCCCCTTCTTCATTCATCCATTTAGGCCCGACTAGGAACACGTGGATCCAGGGAACCTGGCTCGGGAACAGTTTGGTTCGAGTGGTCCGACGTCTTCTTTTATTTAAGACTGATCTTCCTTCCCCCTTGCCTTTAGAGCTGGGGCAACAAGCATGCATGAACCATTTCACGAAGTATGTGTCCAGATAGCCCAAAGTCTCGATAGTTAGCTCTCGGTCTTCCGGTTAAAAAACAACACAACTAAACACGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACACCTTACAGCACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGGTTCTTTGAAATAGTCATCGACTCCCGGGAAAGGGTAGAAGAATGGGACCTATTATGGGACATACAATGCATTACAGATGTATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAAATCAAAATACTTAATAGCATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA

mRNA sequence

ATGCTACAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTGAAACAAACCTTACAACGTTACAAAGAACTGCGGGACATTATAGCTATCCTTGGGTTAGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCACGAGCACGAAAAATTGAGCCTTTCTTATCACAACCAAGTAAAGAGATATATTCATTGATAAGAAAAAGAAAAAATGTGAACGGTGATTGGATTGATGATAAAATCGAATCCTGGGTCTCGAACAGTGATTTGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTAACGACAGAAAAAAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGGAAGCTCTACAGGCCTCGCGCTCCAAACTGATGGCGTCTCGACGTTCTCCTTGACGCCGTCCGTCCTGGCGCTCTCCCCCTTTCCTTTAATAAGTTTTGTGACTGTTGGGCCTCCCAGTTATATGATCAACGGGATCAGTCGTCCCTCGAGCGGGGCTCTTTTTCTTCCGGGAAGGCAAAGTCGTCAGACAATGTTGAAGGCAAGTAAAGCACTAAGACAAAGCAGCAATAAGACAAGTTTAAGACAACCGGCGGAAAGGGCAACACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA

Coding sequence (CDS)

ATGCTACAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTGAAACAAACCTTACAACGTTACAAAGAACTGCGGGACATTATAGCTATCCTTGGGTTAGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCACGAGCACGAAAAATTGAGCCTTTCTTATCACAACCAAGTAAAGAGATATATTCATTGATAAGAAAAAGAAAAAATGTGAACGGTGATTGGATTGATGATAAAATCGAATCCTGGGTCTCGAACAGTGATTTGATTGATGATAAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTAACGACAGAAAAAAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGGAAGCTCTACAGGCCTCGCGCTCCAAACTGATGGCGTCTCGACGTTCTCCTTGACGCCGTCCGTCCTGGCGCTCTCCCCCTTTCCTTTAATAAGTTTTGTGACTGTTGGGCCTCCCAGTTATATGATCAACGGGATCAGTCGTCCCTCGAGCGGGGCTCTTTTTCTTCCGGGAAGGCAAAGTCGTCAGACAATGTTGAAGGCAAGTAAAGCACTAAGACAAAGCAGCAATAAGACAAGTTTAAGACAACCGGCGGAAAGGGCAACACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA

Protein sequence

MLQPRIVGEEHYETAQRVKQTLQRYKELRDIIAILGLDELSEEDRLTVARARKIEPFLSQPSKEIYSLIRKRKNVNGDWIDDKIESWVSNSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGSSTGLALQTDGVSTFSLTPSVLALSPFPLISFVTVGPPSYMINGISRPSSGALFLPGRQSRQTMLKASKALRQSSNKTSLRQPAERATRADDSHAPPVSAFPKAPLSFKRIRGMSSPGKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Homology
[Close]
BLAST of Cla97C11G214375 vs. NCBI nr
Match: RYR40788.1 (hypothetical protein Ahy_A09g046526 [Arachis hypogaea])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. NCBI nr
Match: CAB4284021.1 (unnamed protein product [Prunus armeniaca] >CAB4289452.1 unnamed protein product [Prunus armeniaca] >CAB4305318.1 unnamed protein product [Prunus armeniaca] >CAB4320149.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 31  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 90

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 91  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 131

[Close]
BLAST of Cla97C11G214375 vs. NCBI nr
Match: YP_009387707.1 (ribosomal protein L2 [Hansenia forbesii] >QHS71267.1 ribosomal protein L2 [Haplosphaera phaea] >ART32559.1 ribosomal protein L2 [Hansenia forbesii] >QHV37973.1 ribosomal protein L2 [Hansenia forbesii] >QHV38143.1 ribosomal protein L2 [Hansenia forbesii] >QHV38228.1 ribosomal protein L2 [Hansenia forbesii])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. NCBI nr
Match: QHV38350.1 (ribosomal protein L2 [Hansenia forbesii])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. NCBI nr
Match: YP_009906953.1 (ribosomal protein L2 [Pennantia cunninghamii] >YP_009906974.1 ribosomal protein L2 [Pennantia cunninghamii] >QLI52967.1 ribosomal protein L2 [Pennantia baylisiana] >QLI52988.1 ribosomal protein L2 [Pennantia baylisiana] >QLI53137.1 ribosomal protein L2 [Pennantia cunninghamii] >QLI53158.1 ribosomal protein L2 [Pennantia cunninghamii])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 350
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131

[Close]
BLAST of Cla97C11G214375 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 350
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131

[Close]
BLAST of Cla97C11G214375 vs. ExPASy Swiss-Prot
Match: Q0G9P9 (50S ribosomal protein L2, chloroplastic OS=Daucus carota OX=4039 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 350
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131

[Close]
BLAST of Cla97C11G214375 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 350
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131

[Close]
BLAST of Cla97C11G214375 vs. ExPASy Swiss-Prot
Match: A0A398 (50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-52
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRR EKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRTEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSA 351
           HYGDGEKRYILHPRGA+IGDTIVSGTEVPIKMGNALPLSA
Sbjct: 93  HYGDGEKRYILHPRGALIGDTIVSGTEVPIKMGNALPLSA 132

[Close]
BLAST of Cla97C11G214375 vs. ExPASy TrEMBL
Match: A0A7T7D7D8 (Ribosomal protein L2 OS=Ammopiptanthus nanus OX=111851 GN=rpl2 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.6e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. ExPASy TrEMBL
Match: A0A7S8HPY4 (Ribosomal protein L2 OS=Sibiraea angustata OX=1055022 GN=rpl2 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.6e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. ExPASy TrEMBL
Match: A0A7D5YMX9 (Ribosomal protein L2 OS=Pennantia cunninghamii OX=159372 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.6e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. ExPASy TrEMBL
Match: A0A6J5VN55 (Ribosomal_L2 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39433 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.6e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 31  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 90

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 91  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 131

[Close]
BLAST of Cla97C11G214375 vs. ExPASy TrEMBL
Match: A0A7D5UE67 (Ribosomal protein L2 OS=Pennantia baylisiana OX=453355 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.6e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 352
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133

[Close]
BLAST of Cla97C11G214375 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 199.9 bits (507), Expect = 3.4e-51
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+H CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 350
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131

[Close]
BLAST of Cla97C11G214375 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 199.9 bits (507), Expect = 3.4e-51
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 251 GKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLI 310
           G+H CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLI
Sbjct: 33  GQHHCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLI 92

Query: 311 HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 350
           HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+
Sbjct: 93  HYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131

[Close]
BLAST of Cla97C11G214375 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32
Identity = 80/125 (64.00%), Postives = 94/125 (75.20%), Query Frame = 0 

Query: 13   ETAQRVKQTLQRYKELR----DIIAILGLDELSEEDRLTVARARKIEPFLSQPSKEIYSL 72
            + A  VK    + K+L+    DII ++ +   +  +R+T +R  +    LS  SKEIYSL
Sbjct: 1445 DPAYGVKSIRSKKKDLKINFIDIIDLISIIP-NPINRITFSRNTR---HLSHTSKEIYSL 1504

Query: 73   IRKRKNVNGDWIDDKIESWVSNSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLS 132
            IRKRKNV+GDWIDDKIESWV+NSD IDDKEREFLVQFSTL  EKRIDQILLSLTHSDHLS
Sbjct: 1505 IRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLS 1564

Query: 133  KNDSG 134
            KNDSG
Sbjct: 1565 KNDSG 1565

[Close]
BLAST of Cla97C11G214375 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32
Identity = 80/125 (64.00%), Postives = 94/125 (75.20%), Query Frame = 0 

Query: 13   ETAQRVKQTLQRYKELR----DIIAILGLDELSEEDRLTVARARKIEPFLSQPSKEIYSL 72
            + A  VK    + K+L+    DII ++ +   +  +R+T +R  +    LS  SKEIYSL
Sbjct: 1445 DPAYGVKSIRSKKKDLKINFIDIIDLISIIP-NPINRITFSRNTR---HLSHTSKEIYSL 1504

Query: 73   IRKRKNVNGDWIDDKIESWVSNSDLIDDKEREFLVQFSTLTTEKRIDQILLSLTHSDHLS 132
            IRKRKNV+GDWIDDKIESWV+NSD IDDKEREFLVQFSTL  EKRIDQILLSLTHSDHLS
Sbjct: 1505 IRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLS 1564

Query: 133  KNDSG 134
            KNDSG
Sbjct: 1565 KNDSG 1565

[Close]
BLAST of Cla97C11G214375 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-25
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1   MLQPRIVGEEHYETAQRVKQTLQRYKELRDIIAILGLDELSEEDRLTVARARKIEPFLSQ 60
           MLQPRIVGEEHYETAQ+VKQTLQRYKEL+DIIAILGLDELSEEDRLTVARARKIE FLSQ
Sbjct: 374 MLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQ 433

Query: 61  P 62
           P
Sbjct: 434 P 434

The following BLAST results are available for this feature:
BLAST of Cla97C11G214375 vs. NCBI nr
Match NameE-valueIdentityDescription
RYR40788.11.6e-5099.01hypothetical protein Ahy_A09g046526 [Arachis hypogaea][more]
CAB4284021.11.6e-5099.01unnamed protein product [Prunus armeniaca] >CAB4289452.1 unnamed protein product... [more]
YP_009387707.11.6e-5099.01ribosomal protein L2 [Hansenia forbesii] >QHS71267.1 ribosomal protein L2 [Haplo... [more]
QHV38350.11.6e-5099.01ribosomal protein L2 [Hansenia forbesii][more]
YP_009906953.11.6e-5099.01ribosomal protein L2 [Pennantia cunninghamii] >YP_009906974.1 ribosomal protein ... [more]
BLAST of Cla97C11G214375 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q09MB23.0e-5297.9850S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=... [more]
Q4VZK53.0e-5297.9850S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=... [more]
Q0G9P93.0e-5297.9850S ribosomal protein L2, chloroplastic OS=Daucus carota OX=4039 GN=rpl2-A PE=3 ... [more]
Q0ZIX73.0e-5297.9850S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=... [more]
A0A3983.9e-5297.0050S ribosomal protein L2-B, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-B P... [more]
BLAST of Cla97C11G214375 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7T7D7D87.6e-5199.01Ribosomal protein L2 OS=Ammopiptanthus nanus OX=111851 GN=rpl2 PE=4 SV=1[more]
A0A7S8HPY47.6e-5199.01Ribosomal protein L2 OS=Sibiraea angustata OX=1055022 GN=rpl2 PE=4 SV=1[more]
A0A7D5YMX97.6e-5199.01Ribosomal protein L2 OS=Pennantia cunninghamii OX=159372 GN=rpl2 PE=3 SV=1[more]
A0A6J5VN557.6e-5199.01Ribosomal_L2 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LO... [more]
A0A7D5UE677.6e-5199.01Ribosomal protein L2 OS=Pennantia baylisiana OX=453355 GN=rpl2 PE=3 SV=1[more]
BLAST of Cla97C11G214375 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00830.13.4e-5194.95ribosomal protein L2 [more]
ATCG01310.13.4e-5194.95ribosomal protein L2 [more]
ATCG00860.11.2e-3264.00Chloroplast Ycf2;ATPase, AAA type, core [more]
ATCG01280.11.2e-3264.00Chloroplast Ycf2;ATPase, AAA type, core [more]
ATCG00480.14.2e-2595.08ATP synthase subunit beta [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 258..334
e-value: 1.6E-35
score: 134.0
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 251..350
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 258..334
e-value: 1.9E-29
score: 101.5
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalGENE3D1.10.1140.10coord: 2..78
e-value: 1.3E-29
score: 104.2
NoneNo IPR availableGENE3D2.40.50.140coord: 245..333
e-value: 1.8E-34
score: 119.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..216
NoneNo IPR availablePANTHERPTHR13691:SF5550S RIBOSOMAL PROTEIN L2, CHLOROPLASTICcoord: 251..350
NoneNo IPR availableSUPERFAMILY47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 2..62
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 253..341

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G214375.1Cla97C11G214375.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity