Cla97C11G212750 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G212750
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC116190061
LocationCla97Chr11: 6103592 .. 6103849 (+)
RNA-Seq ExpressionCla97C11G212750
SyntenyCla97C11G212750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCTATGCTGGCTGCCGGAATCATGAAGGTTGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCTAATTCGATCTGCCCTCCGGCTGGGAGGCATCTGCACGGGGACCATCCTTTTGTTGCGGCATGCTCCTGAGATTTACGGATTCGCAGGGGGCCTCAGGCCCTACTTAGTTGACTGA

mRNA sequence

ATGGGATCTATGCTGGCTGCCGGAATCATGAAGGTTGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCTAATTCGATCTGCCCTCCGGCTGGGAGGCATCTGCACGGGGACCATCCTTTTGTTGCGGCATGCTCCTGAGATTTACGGATTCGCAGGGGGCCTCAGGCCCTACTTAGTTGACTGA

Coding sequence (CDS)

ATGGGATCTATGCTGGCTGCCGGAATCATGAAGGTTGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCTAATTCGATCTGCCCTCCGGCTGGGAGGCATCTGCACGGGGACCATCCTTTTGTTGCGGCATGCTCCTGAGATTTACGGATTCGCAGGGGGCCTCAGGCCCTACTTAGTTGACTGA

Protein sequence

MGSMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGICTGTILLLRHAPEIYGFAGGLRPYLVD
Homology
[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_023535322.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111796795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.1 bits (222), Expect = 9.8e-15
Identity = 47/56 (83.93%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKTGSERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 110 SDLAGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 165

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_010646950.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100853704, partial [Vitis vinifera])

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 130 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 185

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_024164864.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112171966 [Rosa chinensis])

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 102 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 157

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_025015804.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC107262506 [Ricinus communis])

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 153 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 208

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: YP_009941480.1 (hypothetical protein [Fagus sylvatica] >QOC70538.1 hypothetical protein [Fagus sylvatica] >QVG61352.1 hypothetical protein [Fagus sylvatica] >QVG61408.1 hypothetical protein [Fagus sylvatica])

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 61  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 116

[Close]
BLAST of Cla97C11G212750 vs. ExPASy TrEMBL
Match: A0A078HIR1 (BnaC02g31340D protein OS=Brassica napus OX=3708 GN=BnaC02g31340D PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. ExPASy TrEMBL
Match: A0A650GAD8 (Uncharacterized protein OS=Raphanus sativus OX=3726 GN=orf71g PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. ExPASy TrEMBL
Match: A0A3P6H127 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC28T60399H PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. ExPASy TrEMBL
Match: A0A6P8BX57 (LOW QUALITY PROTEIN: uncharacterized protein LOC116190061 OS=Punica granatum OX=22663 GN=LOC116190061 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 127 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 182

[Close]
BLAST of Cla97C11G212750 vs. ExPASy TrEMBL
Match: A0A218VQ03 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000030 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. TAIR 10
Match: AT2G07599.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG01040.1). )

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17
Identity = 45/56 (80.36%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA R GGI
Sbjct: 195 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETAIRSAPRKGGI 250

[Close]
BLAST of Cla97C11G212750 vs. TAIR 10
Match: AT2G07599.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG01040.1). )

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17
Identity = 45/56 (80.36%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA R GGI
Sbjct: 280 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETAIRSAPRKGGI 335

The following BLAST results are available for this feature:
BLAST of Cla97C11G212750 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023535322.19.8e-1583.93LOW QUALITY PROTEIN: uncharacterized protein LOC111796795 [Cucurbita pepo subsp.... [more]
XP_010646950.14.9e-1482.14PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100853704, partial [V... [more]
XP_024164864.14.9e-1482.14LOW QUALITY PROTEIN: uncharacterized protein LOC112171966 [Rosa chinensis][more]
XP_025015804.14.9e-1482.14LOW QUALITY PROTEIN: uncharacterized protein LOC107262506 [Ricinus communis][more]
YP_009941480.14.9e-1482.14hypothetical protein [Fagus sylvatica] >QOC70538.1 hypothetical protein [Fagus s... [more]
BLAST of Cla97C11G212750 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G212750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A078HIR12.4e-1482.14BnaC02g31340D protein OS=Brassica napus OX=3708 GN=BnaC02g31340D PE=4 SV=1[more]
A0A650GAD82.4e-1482.14Uncharacterized protein OS=Raphanus sativus OX=3726 GN=orf71g PE=4 SV=1[more]
A0A3P6H1272.4e-1482.14Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC28T60399H PE=4 SV=1[more]
A0A6P8BX572.4e-1482.14LOW QUALITY PROTEIN: uncharacterized protein LOC116190061 OS=Punica granatum OX=... [more]
A0A218VQ032.4e-1482.14Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000030 PE=4 SV=1[more]
BLAST of Cla97C11G212750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07599.11.3e-1780.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G07599.21.3e-1780.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G212750.1Cla97C11G212750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion