Cla97C11G212045 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G212045
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	CCHC-type domain-containing protein
Location	Cla97Chr11: 5350092 .. 5350739 (-)
RNA-Seq Expression	Cla97C11G212045
Synteny	Cla97C11G212045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAAAGTTCGAGATTGAGAAGTTCAACATAACTAATTTCTCGTTGTGGAAGTTGAAGATGAATGCTTTCTTGAGAAAAGACAATTGCCTTGCAGCCATCGATGGGAGGCCAACGAAGATCACAGATGATAGCGAGTGGAACAAGATGGAAGGGAATGCTATTGCAAACACTCATCTAGCATTGGCAGATAATGTATTGTCAAGCATAGAGGAGAAGAAAACTGTAAAGGAGATTTGGGATCATTTCACCAAATTGTATGAGGCTAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTATACTCTTCGGATGTCAGAGTCCACATCAATGACAGAGCACATGAACATAATGAATAGTCTATTTTCTCAAATCACATCATTGGGTCATAAAATAAAGTCAAATGAACATGTTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAATTTAAAAAATAATGTTCTCACCGACTATCTAAACTTTGATGATATTGCAGCTGCTGTTCTAGAAGAGGAAAATCGGCGCAAGAATAAAGAAGATAAGTTGGTAAGTTCACAACAAGCAGAAGCATTGACGGTGACAAGAGGCAGATCAGCGGAGCGTGGCTCAAGTGAGGGCTGA

mRNA sequence

ATGGCAGAAAAGTTCGAGATTGAGAAGTTCAACATAACTAATTTCTCGTTGTGGAAGTTGAAGATGAATGCTTTCTTGAGAAAAGACAATTGCCTTGCAGCCATCGATGGGAGGCCAACGAAGATCACAGATGATAGCGAGTGGAACAAGATGGAAGGGAATGCTATTGCAAACACTCATCTAGCATTGGCAGATAATGTATTGTCAAGCATAGAGGAGAAGAAAACTGTAAAGGAGATTTGGGATCATTTCACCAAATTGTATGAGGCTAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTATACTCTTCGGATGTCAGAGTCCACATCAATGACAGAGCACATGAACATAATGAATAGTCTATTTTCTCAAATCACATCATTGGGTCATAAAATAAAGTCAAATGAACATGTTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAATTTAAAAAATAATGTTCTCACCGACTATCTAAACTTTGATGATATTGCAGCTGCTGTTCTAGAAGAGGAAAATCGGCGCAAGAATAAAGAAGATAAGTTGGTAAGTTCACAACAAGCAGAAGCATTGACGGTGACAAGAGGCAGATCAGCGGAGCGTGGCTCAAGTGAGGGCTGA

Coding sequence (CDS)

ATGGCAGAAAAGTTCGAGATTGAGAAGTTCAACATAACTAATTTCTCGTTGTGGAAGTTGAAGATGAATGCTTTCTTGAGAAAAGACAATTGCCTTGCAGCCATCGATGGGAGGCCAACGAAGATCACAGATGATAGCGAGTGGAACAAGATGGAAGGGAATGCTATTGCAAACACTCATCTAGCATTGGCAGATAATGTATTGTCAAGCATAGAGGAGAAGAAAACTGTAAAGGAGATTTGGGATCATTTCACCAAATTGTATGAGGCTAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTATACTCTTCGGATGTCAGAGTCCACATCAATGACAGAGCACATGAACATAATGAATAGTCTATTTTCTCAAATCACATCATTGGGTCATAAAATAAAGTCAAATGAACATGTTGAACTTCTACTTCAAAGTCTTCCTGATTCGTATGATCAACTTGTCATCAATTTAAAAAATAATGTTCTCACCGACTATCTAAACTTTGATGATATTGCAGCTGCTGTTCTAGAAGAGGAAAATCGGCGCAAGAATAAAGAAGATAAGTTGGTAAGTTCACAACAAGCAGAAGCATTGACGGTGACAAGAGGCAGATCAGCGGAGCGTGGCTCAAGTGAGGGCTGA

Protein sequence

MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTHLALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNIMNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEEENRRKNKEDKLVSSQQAEALTVTRGRSAERGSSEG

Homology

[Close]

BLAST of Cla97C11G212045 vs. NCBI nr
Match: KAA0061179.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa])

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-88
Identity = 172/213 (80.75%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           MA  FEIEKFN TNFSLWKLKM   LRKDNCL  +D RP +I DDS+WN+M+GNA AN H
Sbjct: 1   MAVHFEIEKFNETNFSLWKLKMKVVLRKDNCLEVVDKRPAEIIDDSKWNEMDGNATANIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LALADNVLSSIEEKKT KEIWDH TKLY+AKSLHNKIFLKRKLYTLRMSESTSMTEHMNI
Sbjct: 61  LALADNVLSSIEEKKTAKEIWDHLTKLYKAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+T L +KI+ NE  ELLLQSLPDSYDQLVINL NN+LTDYL+FDD+ +AVLEE
Sbjct: 121 LNTLFSQLTLLAYKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVTSAVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           ENRRKNKEDKLVSSQQAEAL VTRGRS+E  SS
Sbjct: 181 ENRRKNKEDKLVSSQQAEALVVTRGRSSECNSS 213

[Close]

BLAST of Cla97C11G212045 vs. NCBI nr
Match: KAA0044949.1 (hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 6.0e-85
Identity = 168/213 (78.87%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           M  KF+IEKFN TNFSLWKLKM A  RKDNCL AID RP +ITDD++WN+M+GNA+AN H
Sbjct: 1   MMTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LAL DNVLSSIEEKK  KEIWDH  KLYEAKSLHNKIFLKRKLYTLRMS ST MTEHMN 
Sbjct: 61  LALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+T LG+KI+ N+H ELLLQSLPDSYDQLVINL NN+LTDYL+FDD+AA VLEE
Sbjct: 121 LNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           ENR KNKEDKLVSSQQAEALTVTR R  E  SS
Sbjct: 181 ENRCKNKEDKLVSSQQAEALTVTRVRPLECNSS 213

[Close]

BLAST of Cla97C11G212045 vs. NCBI nr
Match: TYK16527.1 (hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 3.3e-83
Identity = 166/213 (77.93%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           M  KF+IEKFN TNFSLWKLKM A  RKDNCL AID RP +ITDD++WN+M+GNA+AN H
Sbjct: 1   MMTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LALADNVLSSIEEKK  KEIWDH  KLYEAKSLHNKIFLKRKLYTLRMS ST MTEHMN 
Sbjct: 61  LALADNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+T LG+KI+ N+  ELLLQSLPDSYDQLVINL NN+LTDYL+FDD+ A VLEE
Sbjct: 121 LNTLFSQLTLLGYKIEPNKCAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVVATVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           ENR KNKEDKLVSSQQAE LTVTR R  E  SS
Sbjct: 181 ENRCKNKEDKLVSSQQAEVLTVTRVRPLECNSS 213

[Close]

BLAST of Cla97C11G212045 vs. NCBI nr
Match: KAA0026163.1 (Gag-Pol [Cucumis melo var. makuwa] >TYK11620.1 Gag-Pol [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 3.3e-83
Identity = 162/209 (77.51%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           MA KFEIEKFN TNFSLW LKM   LR DNCL AID  P +ITDD++WN+M+GNA+ N H
Sbjct: 1   MAAKFEIEKFNGTNFSLWTLKMKVVLRNDNCLEAIDKGPAEITDDNKWNEMDGNAMENIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LALADNVLSSI+EKK  KEIWDH TKLYE KSLHNKIFLKRKLYTLRMSESTSMTEHMN 
Sbjct: 61  LALADNVLSSIKEKKIAKEIWDHLTKLYETKSLHNKIFLKRKLYTLRMSESTSMTEHMNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+  LG+KI+ NE  ELLLQSL DSYDQLVINLKNN+L DYL+FDD+ +AVLEE
Sbjct: 121 LNTLFSQLALLGYKIEPNERAELLLQSLLDSYDQLVINLKNNILIDYLSFDDVVSAVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAE 210
           ENRRKNKEDKL++ QQAEALTVTRGR  E
Sbjct: 181 ENRRKNKEDKLITLQQAEALTVTRGRPLE 209

[Close]

BLAST of Cla97C11G212045 vs. NCBI nr
Match: BAD34493.1 (Gag-Pol [Ipomoea batatas])

HSP 1 Score: 308.1 bits (788), Expect = 5.8e-80
Identity = 158/215 (73.49%), Postives = 181/215 (84.19%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           MA KFEIEKFN  NFSLWKLK+ A LRKDNCLAAI  RP   TDD +W++M  +A+A+ +
Sbjct: 1   MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLY 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           L++AD VLSSIEEKKT  EIWDH  +LYEAKSLHNKIFLKRKLYTLRMSESTS+TEH+N 
Sbjct: 61  LSIADGVLSSIEEKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+TSL  KI+  E  ELLLQSLPDSYDQL+INL NN+LTDYL FDD+AAAVLEE
Sbjct: 121 LNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSSEG 216
           E+RRKNKED+ V+ QQAEALTV RGRS ERG S G
Sbjct: 181 ESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSG 215

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BLAST of Cla97C11G212045 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.2e-25
Identity = 72/213 (33.80%), Postives = 116/213 (54.46%), Query Frame = 0


Query: 4   KFEIEKFNITN-FSLWKLKMNAFLRKDNC--LAAIDGRPTKITDDSEWNKMEGNAIANTH 63
           K+E+ KFN  N FS W+ +M   L +     +  +D +        +W  ++  A +   
Sbjct: 5   KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIR 64

Query: 64  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 123
           L L+D+V+++I ++ T + IW     LY +K+L NK++LK++LY L MSE T+   H+N+
Sbjct: 65  LHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNV 124

Query: 124 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 183
            N L +Q+ +LG KI+  +   LLL SLP SYD L   + +   T  +   D+ +A+L  
Sbjct: 125 FNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT--IELKDVTSALLLN 184

Query: 184 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           E  RK  E     +Q    +T  RGRS +R S+
Sbjct: 185 EKMRKKPE-----NQGQALITEGRGRSYQRSSN 210

[Close]

BLAST of Cla97C11G212045 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 50/183 (27.32%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 4   KFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTHLAL 63
           K  I+ F+   +++WK ++ A L + + L  +DG      DDS W K E  A +     L
Sbjct: 5   KRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDS-WKKAERCAKSTIIEYL 64

Query: 64  ADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNIMNS 123
           +D+ L+      T ++I ++   +YE KSL +++ L+++L +L++S   S+  H +I + 
Sbjct: 65  SDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDE 124

Query: 124 LFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEEENR 183
           L S++ + G KI+  + +  LL +LP  YD ++  ++  +  + L    +   +L++E +
Sbjct: 125 LISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIE-TLSEENLTLAFVKNRLLDQEIK 184

Query: 184 RKN 187
            KN
Sbjct: 185 IKN 185

[Close]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL
Match: A0A5A7V644 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.6e-89
Identity = 172/213 (80.75%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           MA  FEIEKFN TNFSLWKLKM   LRKDNCL  +D RP +I DDS+WN+M+GNA AN H
Sbjct: 1   MAVHFEIEKFNETNFSLWKLKMKVVLRKDNCLEVVDKRPAEIIDDSKWNEMDGNATANIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LALADNVLSSIEEKKT KEIWDH TKLY+AKSLHNKIFLKRKLYTLRMSESTSMTEHMNI
Sbjct: 61  LALADNVLSSIEEKKTAKEIWDHLTKLYKAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+T L +KI+ NE  ELLLQSLPDSYDQLVINL NN+LTDYL+FDD+ +AVLEE
Sbjct: 121 LNTLFSQLTLLAYKIEPNERAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVTSAVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           ENRRKNKEDKLVSSQQAEAL VTRGRS+E  SS
Sbjct: 181 ENRRKNKEDKLVSSQQAEALVVTRGRSSECNSS 213

[Close]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL
Match: A0A5A7TUN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002510 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.9e-85
Identity = 168/213 (78.87%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           M  KF+IEKFN TNFSLWKLKM A  RKDNCL AID RP +ITDD++WN+M+GNA+AN H
Sbjct: 1   MMTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LAL DNVLSSIEEKK  KEIWDH  KLYEAKSLHNKIFLKRKLYTLRMS ST MTEHMN 
Sbjct: 61  LALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+T LG+KI+ N+H ELLLQSLPDSYDQLVINL NN+LTDYL+FDD+AA VLEE
Sbjct: 121 LNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           ENR KNKEDKLVSSQQAEALTVTR R  E  SS
Sbjct: 181 ENRCKNKEDKLVSSQQAEALTVTRVRPLECNSS 213

[Close]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL
Match: A0A5A7SNG9 (Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00680 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 162/209 (77.51%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           MA KFEIEKFN TNFSLW LKM   LR DNCL AID  P +ITDD++WN+M+GNA+ N H
Sbjct: 1   MAAKFEIEKFNGTNFSLWTLKMKVVLRNDNCLEAIDKGPAEITDDNKWNEMDGNAMENIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LALADNVLSSI+EKK  KEIWDH TKLYE KSLHNKIFLKRKLYTLRMSESTSMTEHMN 
Sbjct: 61  LALADNVLSSIKEKKIAKEIWDHLTKLYETKSLHNKIFLKRKLYTLRMSESTSMTEHMNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+  LG+KI+ NE  ELLLQSL DSYDQLVINLKNN+L DYL+FDD+ +AVLEE
Sbjct: 121 LNTLFSQLALLGYKIEPNERAELLLQSLLDSYDQLVINLKNNILIDYLSFDDVVSAVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAE 210
           ENRRKNKEDKL++ QQAEALTVTRGR  E
Sbjct: 181 ENRRKNKEDKLITLQQAEALTVTRGRPLE 209

[Close]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL
Match: A0A5D3CXA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003420 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 166/213 (77.93%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           M  KF+IEKFN TNFSLWKLKM A  RKDNCL AID RP +ITDD++WN+M+GNA+AN H
Sbjct: 1   MMTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIH 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           LALADNVLSSIEEKK  KEIWDH  KLYEAKSLHNKIFLKRKLYTLRMS ST MTEHMN 
Sbjct: 61  LALADNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+T LG+KI+ N+  ELLLQSLPDSYDQLVINL NN+LTDYL+FDD+ A VLEE
Sbjct: 121 LNTLFSQLTLLGYKIEPNKCAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVVATVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSS 214
           ENR KNKEDKLVSSQQAE LTVTR R  E  SS
Sbjct: 181 ENRCKNKEDKLVSSQQAEVLTVTRVRPLECNSS 213

[Close]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL
Match: Q6BCY1 (Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.8e-80
Identity = 158/215 (73.49%), Postives = 181/215 (84.19%), Query Frame = 0


Query: 1   MAEKFEIEKFNITNFSLWKLKMNAFLRKDNCLAAIDGRPTKITDDSEWNKMEGNAIANTH 60
           MA KFEIEKFN  NFSLWKLK+ A LRKDNCLAAI  RP   TDD +W++M  +A+A+ +
Sbjct: 1   MAAKFEIEKFNGKNFSLWKLKVKAILRKDNCLAAISERPVDFTDDKKWSEMNEDAMADLY 60

Query: 61  LALADNVLSSIEEKKTVKEIWDHFTKLYEAKSLHNKIFLKRKLYTLRMSESTSMTEHMNI 120
           L++AD VLSSIEEKKT  EIWDH  +LYEAKSLHNKIFLKRKLYTLRMSESTS+TEH+N 
Sbjct: 61  LSIADGVLSSIEEKKTANEIWDHLNRLYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNT 120

Query: 121 MNSLFSQITSLGHKIKSNEHVELLLQSLPDSYDQLVINLKNNVLTDYLNFDDIAAAVLEE 180
           +N+LFSQ+TSL  KI+  E  ELLLQSLPDSYDQL+INL NN+LTDYL FDD+AAAVLEE
Sbjct: 121 LNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEE 180

Query: 181 ENRRKNKEDKLVSSQQAEALTVTRGRSAERGSSEG 216
           E+RRKNKED+ V+ QQAEALTV RGRS ERG S G
Sbjct: 181 ESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSG 215

The following BLAST results are available for this feature:

BLAST of Cla97C11G212045 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061179.1	2.0e-88	80.75	Gag-Pol [Cucumis melo var. makuwa] >TYK06231.1 Gag-Pol [Cucumis melo var. makuwa...	[more]
KAA0044949.1	6.0e-85	78.87	hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]	[more]
TYK16527.1	3.3e-83	77.93	hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]	[more]
KAA0026163.1	3.3e-83	77.51	Gag-Pol [Cucumis melo var. makuwa] >TYK11620.1 Gag-Pol [Cucumis melo var. makuwa...	[more]
BAD34493.1	5.8e-80	73.49	Gag-Pol [Ipomoea batatas]	[more]

BLAST of Cla97C11G212045 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.2e-25	33.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.0e-14	27.32	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V644	9.6e-89	80.75	Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00020 PE=4 S...	[more]
A0A5A7TUN0	2.9e-85	78.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SNG9	1.6e-83	77.51	Gag-Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00680 PE=4 S...	[more]
A0A5D3CXA6	1.6e-83	77.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
Q6BCY1	2.8e-80	73.49	Gag-Pol OS=Ipomoea batatas OX=4120 GN=Rtsp-1AA PE=4 SV=1	[more]

BLAST of Cla97C11G212045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 177..198
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 48..187 e-value: 3.1E-32 score: 111.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..215
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 1..213
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 1..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G212045.1	Cla97C11G212045.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006508	proteolysis
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008270	zinc ion binding