Cla97C11G210820 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G210820
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 4177359 .. 4178272 (+)
RNA-Seq ExpressionCla97C11G210820
SyntenyCla97C11G210820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTTACTCTCACGTGGGAATTGATGCAAATTATAGATAAGAATTGTATGGTTTTAAATTTTTAGATTGTCTTCAAAATCCCAACTCCATTAGAGCTTTCTCTCTTTCTCTGTATTCTGTGGATTCCTTCTGGGTTTTCCCCCCATTTTCTTTCTTTGAGATCCATTGATTTGTTTGTGTTTTTATTCTGTATAGTTCTTTGTTGTTGTGTTTTATCTTTCTGGGGTTTGAAGAAATTTCCATGAAAAGTTAGATTTGATGTTGTGTTGGTATTTGGGATTTTGCTTTGGGATTTTTGGGCTCCGCCGATCGGGTGCTGTTTTCGAGCTTTTTTGTTCCCTCCGACAACCACAACCACAACCGTCGCGGATTTCAGGGTAATTTTTATCTTAAACTATATACTTATGCTCAGTCACCTTTTTAATTTGTTTATTCAACTATGAACTTAAAATATTCAATTCTTGTCTCTGCATATGCTAAGAAAGTACACTCTGCTTGATTTCTTCTGCTGATCAGTTCTGCATGCAGGTTATGAGTAGCTCTATGTTGATTGCTTCTCCTATTTCTTCTTCTTCTTTTTGTGGGGATTTGGGGGAAACTTCTGATTGATGGTTTTTGTTGTGAATTGGTTGCTCTTAATGTGGTTTTGTGAATTTGGCTGTATATTAAGTAACTGGAGAATCTATGGTCTCGATGTTTGTTTTAATTTTAATATTTCATTAATCATTAGTAGGAAGCTTGTGAAGAAGTATGGAATTGAAAACCCTAGGAATTTGCCATCATGAGTTGAGTTTTTGTTTGTTTGTTGACATTCAATTGAACTTTTGATTAATTGGTGACTGAAAATTATGTTAGGTGCCAACGATACTTGATCTCGGTCACCGTAGAATCCGAAAAGTTCTGAATTGA

mRNA sequence

ATGGGATTTGATGTTGTGTTGGTATTTGGGATTTTGCTTTGGGATTTTTGGGCTCCGCCGATCGGGTGCTGTTTTCGAGCTTTTTTGTTCCCTCCGACAACCACAACCACAACCGTCGCGGATTTCAGGGTGCCAACGATACTTGATCTCGGTCACCGTAGAATCCGAAAAGTTCTGAATTGA

Coding sequence (CDS)

ATGGGATTTGATGTTGTGTTGGTATTTGGGATTTTGCTTTGGGATTTTTGGGCTCCGCCGATCGGGTGCTGTTTTCGAGCTTTTTTGTTCCCTCCGACAACCACAACCACAACCGTCGCGGATTTCAGGGTGCCAACGATACTTGATCTCGGTCACCGTAGAATCCGAAAAGTTCTGAATTGA

Protein sequence

MGFDVVLVFGILLWDFWAPPIGCCFRAFLFPPTTTTTTVADFRVPTILDLGHRRIRKVLN
Homology
[Close]
BLAST of Cla97C11G210820 vs. NCBI nr
Match: KGN61832.1 (hypothetical protein Csa_006669 [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 4.2e-12
Identity = 42/61 (68.85%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 3   FDVVLVFGI---LLWDFWAPPIGCCFRAFLFPPTTTTTTVADFRVPTILDLGHRRIRKVL 61
           FDVVLVFGI     W+FWAPPIGCCFRAFLFPP  TTTTVADFRV T+L+       K L
Sbjct: 68  FDVVLVFGIWDFSFWNFWAPPIGCCFRAFLFPP--TTTTVADFRVTTVLEFVTVESEKAL 126

[Close]
BLAST of Cla97C11G210820 vs. ExPASy TrEMBL
Match: A0A0A0LM19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249865 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12
Identity = 42/61 (68.85%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 3   FDVVLVFGI---LLWDFWAPPIGCCFRAFLFPPTTTTTTVADFRVPTILDLGHRRIRKVL 61
           FDVVLVFGI     W+FWAPPIGCCFRAFLFPP  TTTTVADFRV T+L+       K L
Sbjct: 68  FDVVLVFGIWDFSFWNFWAPPIGCCFRAFLFPP--TTTTVADFRVTTVLEFVTVESEKAL 126

The following BLAST results are available for this feature:
BLAST of Cla97C11G210820 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61832.14.2e-1268.85hypothetical protein Csa_006669 [Cucumis sativus][more]
BLAST of Cla97C11G210820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G210820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM192.0e-1268.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249865 PE=4 SV=1[more]
BLAST of Cla97C11G210820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G210820.1Cla97C11G210820.1mRNA