Cla97C11G209230 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G209230
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 2839102 .. 2845472 (-)
RNA-Seq ExpressionCla97C11G209230
SyntenyCla97C11G209230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTATCGTTTTGAAGATTGTTGATTGTTGGAATGTAAAGCACTTGCACAAAAGAGGCGTTGATGTTAGTGATTTCAGCATTGTTGATACTACTTCGATGAACATTGAAGGAGATCACAACAGTATGGATGCATATAATTATCTAATGCCATGCTTCGAAGGTGATGACGATGATGAAGACCCAATTTATGATTATGCTCCAGCTGCGTAATTTGATGCATACATATGATTACTACGTGAGAGTTGAGTCATATAACATTATTTTACATTTTAATGATCTATTTGTTTTTAATTTTAATATCCATAAAAGAGAAGTCTAGTCTTTTAATAAATTATTTCTTTTGGTAAGCTATGTGTAAGAAAAAGAAAAAGAATTATATTCTACATTAACGTGAAATAATATTTGAAAAAGGAGACAATTCATTGTTGATTTATTTTCGTAAATGAAACATAATATGTTCTCCATTATTGTTCTTCCATCATATTTTTTCACAATATTTTTAGGTCAATCACATATATTTATTTAAAGAAATATAGATTACAATTTTTTTTTTAGAATAACAATTGTGAGAATGGGAATTGAACCTCTAACTTCTAATAACAAAGGTTATGTCAATTACTACCCACCAAAGCATATTTAGCAAAGAAACATAATTAATTATATATAAATATTTAGTATTTCAAACATTTTTTTTTTTAGGATAACAATTTATTATCCTTGATAAGCAAAAGTATGACATGTTTATTTTTATGGATCACTAATTATACCTATGTTATAATTAGTGGATGGTGAATTAGTAGAAATTAAATAAAAATGTAAAATTGGTACATCTTGAAGGAACCGAATTTCCTGCGGAAGCGAAGGATTGATTGTCTTGTACCATTAAATTTGTTTTTGAAAAACTAAAATTTAATAAGGATAAACAACAAAATATTAGCATTAGCATGATTTTTAGAAGAAATAAAGGATAAAAGATTTCCTACCTTTCAAGACTGTCTTCAGATTGTCTTTAGTGGAATTTTTCTTTTTTAAGTCACGAACCGAAAAAATTCTCCAATGGAAACAACAAGAACTCTTTTTGTTTGGATCACCACCACAATGTTACCTTACAATTCTCAAGGAAGAATCTAACAGAGAAGTTGTGTGAACTCTCTATTTCTTTTGTTAAGGAAATTCTTTTTGGGAGAGAATAGGGAATTGGAGAAGGAAAGATCTCACAAAACTTTTTTGTGTTAAGGTATGCTATAACTTACTCTCCCCTTTCCCTCTTCTTTTTAGCGTGAGAGATGAGAAATAACTTCTTAAAAAAGATGGGAAGTTATTTCTTTAATAATAAAAATAATAATAATAATAATATTATTATAATTAATTTAATTATATAATTAAATCATATTTAATATATAATTAAATAAATTAATTAATTAATCAATAAATTAAATATTCATTTGAATCATATTCAAACAACATTCTCTCACATAACCTATAGTTTTGATATGAATTTGATTCATATTAATTCTTAACTATAAAAAACATAACCTATAGTTTTGATATGAATCTCATTCATATTAATTTTTAACTATAGTTTTTATATGAGCCTCATTCGTATAATTAATATTTAAATCTCATTTAGATATTTATATCTCTCATAATATAAAGTATAAATTTTGAATCTCATTCAAAATAAACTTTATATTATAATGTATTTATATACATTATGTAAATTATATCACATACAATTAATTCCCTTATTAATTTGAACATTTTAAATTAAACCAAAATGTTTAATTCTCATACTAATCATTAATGAGCAAGCAAGGGGACCTCATGGACCTATAATTAAAAGCTCCAATGATATGCAATTAATCAATTAAATGCTTTAATTAGATTAATCAATATTCTTAAAGTCTAAGTATTCATAACATAGGCATGGGTCCTTAGTTTATTGGACTTAGAGTTATGATAAAAACAATTCACACATATTCAATAACATATTTATTGAATTAAATAATATTTATAACAACTTTATTGAGAATATGTTCAATGTTTACAAACTACGAATTTTAAGACATAAAACCCAACAAGATTGATTTTCTCCAAATTTTAATTTATAAAATTAAATAGTACCTTTTATAATTAAATTTGGAATATGTTGATTTGTTATAATAGAAATTAGGGCAAAATACACTTTTGGTTTACGAAGTTTGAGTTTAGTGTCACTTTGGTCCTTGAAATTATAAAATAGACACTTTAGTCACTGAGGCTTGATAAATAGTTATAAATGGTCCTTAGACAGTTAGTTGACTAACGAGAAATGATGTGGAGAGTTAGATTGTTGATTGTGGGTTTACGAGGGGACAAATATATGAATGTAATATTAATTTTGTTAGTGAGGTGACTTGTTCTCTCCTTTACTCTTTTCCTTCCCATCTTCTTATATTCTCACACGTTCGAATACGCTTTGCCACAACCATCCGCCGACCACCCCTCCTTAGCAATATTCTCACACTCATCATCCAACATGAAAATTCAAAGGCCACCTCTGTAAAGTACAAGGAAAATTATCTTGTAAATTTTTTCATGTCCAAACAAATTTCGGCTAAAATCTGCTTTGAATCTTCCTTTTTCTTTGTTCGGTATTTAAAAAAAAAAAAAAACACTAAATTTCATCCATATAAACTAGAATAATGGAAGCCAGTAATTCCATACATACACCAAATCGTCTGGTAGCTAGTTTGGCCTTCAACCTTTTGCATCTCTTCCTCTTCTTGTTGATCATCTCCATGACAACGGCTAGGTGTTTGGGTAAAATAGAATAGAGTTTGAAGCATGTTGAATAGTTAATAATTTTTGTAGATGGTGAGAGAAGGCAAATAATGGGCATGAAGAAAGCGACGACTTTTGAGATTGTGGACATCAAAATTGGAGAACCCGACTTGGGTTCTTTGCTGCTTGTTATAGCTAGTAAAAATTGTAGTGGGGGAAATGAAGTTTTGAAAGCAACAAATTTAGAAGTTAATTGAAAATGTATTCCATTAATTAATGATTTGAGTCAGTTTGTTCACAATGTTTGTCGGATCAAGGAAGATGAAGCAAAAAATTTGCAATGGATTTCTGGGTTGAATTTGTCGGTTTGTTCAACATGAAAGTACTTGCATAAACAGAGAAATTATTTTGTTTTCAGAATGCTGATACACACCAGATCATCATCTTGCACGGTGGACAACAATGGTGATGTTTGTCATAGGTGAGGGAGAATAAGGGCAAAAAGGAAAAGATAGAAGGAGAGAGAACACCTTACTAATTATATTAATATATTTGTCTCGTCATCAATGCTCAATCAACAACCTAACCCTCCACGTCATTTTCCGTTAGTCACTTAACGAAAAGTACATTTAAAACTATTTATCAAACTCAAAGACTAAAGTGACCATTTTAAAACCTTAGGGACCAAATTGACACTAAACCCTCAAATTTTGGGATACAAAAAAGTGTATTTTGCCCTATAAATTATAAGCGAACAACCATCCCGTATGTATGATCATCAAATAATGTTTGACTTTAACTTAATTAAAAATTTTCATTAGCTTTCAACTTTATTGTTTAGCATGCGGAGTTGACTTCATATATTTATAAAGTTCATATGTCTATTTCTAAAGTGCGTTAGTTTTGGATGCTAAGTCGAGTTCATAGGAACTCTTTCTAAAGTGTGCTAGTTCAGAGTACAGAGTAAAGTTCATATATTAAGAACATTTGGTGCAGTTTTTTATGAGATGAATAATCTATTTTTATGGTGATTATTTTTGTTTTTGGAAACCTTTTTATTCAATAAACCTACATATTTTTTAATAAACTATGGAATCACTTTGTTTTGTTTTGTTTTTTTAAATACAAATGTATTGTTGAGAGTTTTGAAAAATGGGGTTTAGGGTTTACTTTTGGTTCACGTTCATTTTTTTTTTTAAAAAAATATAAACAATCATTTTACAAATTTGTGCCTGTGACATTTCTAATTAAGTTGGACAAAATTATATAGGATTCATTGGTACAAAACAAATTTAAATTTATATTGCAAGTGAAATATCCTCCAAAATGTAATTATATTGTAATTACCCTATATTATATTATAGTATACAAAACAAATTTGAATTTATATTAATGGTCATATTACATGGTTGCCACAAAAAATATATAACAAAAAGTATTTAGTTTGTGTATATGCTAAAAATGTTTTTATTAATGTATAATTACTATAAATAATGACTTGAATATAAAAGATTATGAAACTAATAAAAAAAAATTGAATGAAAACTTGTTTTAAACTGTTTGTGTATATACTAAACCATTTATTGACATTTTATAATAATCGATATATGTATTTTTTAAATTAATGATTATTTTTAAGCTCTAAATTAAAATTTTATGGATGGTTTTATGTCACGAGCGTCAACAAAACTCAAATTTGAAGTAGTGATAATTTAAAACAATGGTCATCAGAGTTGGTGGAGGTGGTAACTATTGGAGGTCGCTAGAGTTGGTTGTTGATGGTGGTGGTCAGATGTGACTAGAGTTGGCCGCCACTTTTTTAAGTACATTACCCCCATTCGTGCAATTTGATTGCTCTACCTGATGTGTCAATTTGATTACAATGAAAGCTATGTCCTGTATAGTAGAGAATGCCAGAACCAAATCCACGTGCATTATTATGCCATAGAAGCTCAATTGATTTAAAAACACTTCTCAAATGATGGAGTACTCAAAGGATTGGTTGAGATTTTAGAGAGTATTGAGAGAGATTTCATAAGGCAGATGACACTGATACACCACTCTGCTCTGTTTACAAAACCCACATCTCTCTCTAACACAATGTGTCTCTTTTTCAAACATAACATACTCATCAATGAAACTTTAAAAACATATATATCAATCACTTAAAATGTGAAAATGAAATATGAAAAAAATATACAATTCATTTTGATGAAAATATGTATAAAATAATGAAAATGATTGAGATACAATTAACTGTGCTAACAAAAAAAATTTAAATAATTGTTGATTAGGTAAGACAAAATCAAATTAAAAATAGGGGGAGAAAAATTATGAGGAAGAGGTTGGTTCATTTTGAATCCATTCGTAAAGTAGTTATCAAAATCTAATTTGAATATTAAAAATAAATTTGATTCTTAAAAGAGGGCATAAATTACATGATGACGCTCATTTTCATTATGAAATCGAATTTGTTAGATTCTAATTTGATTAATCAAGCTCTCCAATTACACTGGATTTATGTCATGGTTATTAATGAAGCTCTCCTCCACTTACACTGTATTTATATCTTAGTTATTAATCAGACTCTCCACTTACACTGTATTTCATATTATTCCGGACATACAAACCAACTAAGGGCAAATAAGGTATTATCAAAATGTCACCCACGTGCCTTAGCTTGCACACAATTTGCTATATATCCAAACGAATTCTCATTTGTTGCTATCTTATCCAATTTCCCTTAAAATAATTACTATTTCTTTTTAAATCCTTAGTTTGGGTATTAAATTTTTAAAAATTTTGAGGGTATTGTGGTAAAACACACACTTATTTATTTAATTATTAACAATTACACAAGTTAGTAAATACAACTAAAAGCAGTTTTGTTATAGTTGAGCCCCTTGTTTCTGTAAGTTCGTAAACATAATCAAAAGTAGTCCATTTACTATTGCATTTTAATTACTTTATAATGTAATATAATTATGAGAGTTATAAATACACTATAAAAAAAGTGAAGAAGAAAAAAAAGTAATCCCAAGTTGAGAATAGTGTAAATGCAAAAGGAAAAAGAAAAAAAAAAAAAAACCCTAAATAGAAATAGATATATATTCTCTTCTTATCTTCATATATCTCTCAAGATTCCTTCATTTTGGAATTTGTTTGGTTGAAAAAACTTGTCTTCCACGTGTTTGATGACATGTCAACCTAAATCCAACGTGGCTACAGCTACATTGAAATCCCATTCGTGGTTGGAGTGCACCATGAGGAGCCCCTCACTCTGGCTCGTGCCCACCTTGCGCCACAAACGAGCCCACTCATAAATCAATCCCTTCTCACCTTTTCATCTTGCCTATATATAAAGTACCAAAGACCACACCAAATAACCAAAATCTGATCAACAATAATTCCTCTCCTCTTTATTTTCTTGATCTAGACATCAAAATATCAACATGGTTCCCATTTCTAAATCATCTTTTGCTTTGTGGTTGAAGAACCTTGAAGGTGGGGAACATGGTTATTGCGATTATATTGCTCTCGTTTCAACGGTAGAAGGGGATGGTGACGACGATGACGACGGCTACGACTATGCTCCGGCTGCTTGA

mRNA sequence

ATGTCTATCGTTTTGAAGATTGTTGATTGTTGGAATGTAAAGCACTTGCACAAAAGAGGCGTTGATGTTAGTGATTTCAGCATTGTTGATACTACTTCGATGAACATTGAAGGAGATCACAACAGTATGGATGCATATAATTATCTAATGCCATGCTTCGAAGGTGATGACGATGATGAAGACCCAATTTATGATTATGCTCCAGCTGCACATCAAAATATCAACATGGTTCCCATTTCTAAATCATCTTTTGCTTTGTGGTTGAAGAACCTTGAAGGTGGGGAACATGGTTATTGCGATTATATTGCTCTCGTTTCAACGGTAGAAGGGGATGGTGACGACGATGACGACGGCTACGACTATGCTCCGGCTGCTTGA

Coding sequence (CDS)

ATGTCTATCGTTTTGAAGATTGTTGATTGTTGGAATGTAAAGCACTTGCACAAAAGAGGCGTTGATGTTAGTGATTTCAGCATTGTTGATACTACTTCGATGAACATTGAAGGAGATCACAACAGTATGGATGCATATAATTATCTAATGCCATGCTTCGAAGGTGATGACGATGATGAAGACCCAATTTATGATTATGCTCCAGCTGCACATCAAAATATCAACATGGTTCCCATTTCTAAATCATCTTTTGCTTTGTGGTTGAAGAACCTTGAAGGTGGGGAACATGGTTATTGCGATTATATTGCTCTCGTTTCAACGGTAGAAGGGGATGGTGACGACGATGACGACGGCTACGACTATGCTCCGGCTGCTTGA

Protein sequence

MSIVLKIVDCWNVKHLHKRGVDVSDFSIVDTTSMNIEGDHNSMDAYNYLMPCFEGDDDDEDPIYDYAPAAHQNINMVPISKSSFALWLKNLEGGEHGYCDYIALVSTVEGDGDDDDDGYDYAPAA
Homology
[Close]
BLAST of Cla97C11G209230 vs. NCBI nr
Match: KAG6599418.1 (hypothetical protein SDJN03_09196, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.8 bits (242), Expect = 6.9e-17
Identity = 64/131 (48.85%), Postives = 73/131 (55.73%), Query Frame = 0 

Query: 1   MSIVLKIVDCWNVKHLHKRGVDVSDFSIVDTTSMNIEGDHNSMDAYNYLMPCFEGDDDDE 60
           MSIV KI   WNV   +K   D +D  I+  T MN E D NS+DAY YL PCF     D+
Sbjct: 1   MSIVFKIAVRWNVNDSYKGDDDGTDLDIIYATKMNTEEDRNSIDAY-YLKPCF-----DD 60

Query: 61  DPIYDYAPAAHQNINMVPISKSSFALWLKNLEGGEHGY-----CDYIALVSTVEGDG-DD 120
           D  +D          MVPISK   A WL +L  G HGY     C YIA VS  + DG DD
Sbjct: 61  DAFFD----------MVPISK-PMASWLTSLGAGRHGYGERRDCGYIAPVSMAKEDGDDD 114

Query: 121 DDDGYDYAPAA 126
           DDD YD+APAA
Sbjct: 121 DDDSYDFAPAA 114

[Close]
BLAST of Cla97C11G209230 vs. NCBI nr
Match: KAA8523059.1 (hypothetical protein F0562_009482 [Nyssa sinensis])

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-06
Identity = 41/82 (50.00%), Postives = 47/82 (57.32%), Query Frame = 0 

Query: 54  EGDDDDEDPIYDYAPAAHQNINMVPISKSSFALWLKNL------EGGEHGYCDYIALVST 113
           +GDDDD+D  YDYAPAA     M PISK     W K        + G+ GY    A  + 
Sbjct: 41  DGDDDDDDSDYDYAPAASTEEKMSPISK-VIGPWCKRHGDGDGDDDGDDGY--NYAPAAC 100

Query: 114 VEGDGDDDDD----GYDYAPAA 126
           +EGDGDDDDD    GYDYAPAA
Sbjct: 101 MEGDGDDDDDDDDGGYDYAPAA 119

[Close]
BLAST of Cla97C11G209230 vs. NCBI nr
Match: KGN60650.1 (hypothetical protein Csa_019209 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05
Identity = 33/56 (58.93%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 76  MVPISKSSFALWLKNLEG-GEHGY-----CDYIALVSTVEGDGDDDDDGYDYAPAA 126
           M PIS+    L LKNL G G HGY     C Y  LVS  EGD DDDD GYD+APAA
Sbjct: 1   MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA 56

[Close]
BLAST of Cla97C11G209230 vs. ExPASy TrEMBL
Match: A0A5J4ZYE2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_009482 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.4e-07
Identity = 41/82 (50.00%), Postives = 47/82 (57.32%), Query Frame = 0 

Query: 54  EGDDDDEDPIYDYAPAAHQNINMVPISKSSFALWLKNL------EGGEHGYCDYIALVST 113
           +GDDDD+D  YDYAPAA     M PISK     W K        + G+ GY    A  + 
Sbjct: 41  DGDDDDDDSDYDYAPAASTEEKMSPISK-VIGPWCKRHGDGDGDDDGDDGY--NYAPAAC 100

Query: 114 VEGDGDDDDD----GYDYAPAA 126
           +EGDGDDDDD    GYDYAPAA
Sbjct: 101 MEGDGDDDDDDDDGGYDYAPAA 119

[Close]
BLAST of Cla97C11G209230 vs. ExPASy TrEMBL
Match: A0A0A0LF41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005960 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 33/56 (58.93%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 76  MVPISKSSFALWLKNLEG-GEHGY-----CDYIALVSTVEGDGDDDDDGYDYAPAA 126
           M PIS+    L LKNL G G HGY     C Y  LVS  EGD DDDD GYD+APAA
Sbjct: 1   MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDSDDDDGGYDFAPAA 56

[Close]
BLAST of Cla97C11G209230 vs. ExPASy TrEMBL
Match: M1BUQ2 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.3e-04
Identity = 39/91 (42.86%), Postives = 45/91 (49.45%), Query Frame = 0 

Query: 37  EGDHNSMDAYNYL-MPCFEGDDDDEDPIYDYAPAAHQNINMVPISKSSFALWLKNLEG-G 96
           +GD +S D Y+Y    C EGD DD D  YDYAPAA                   +LEG  
Sbjct: 18  DGDDDSDDGYDYAPAACLEGDGDDNDGDYDYAPAA-------------------SLEGDD 77

Query: 97  EHGYCDYIALVSTVEGDGDDDDDGYDYAPAA 126
           + G  DY    S    +GDDDD  YDYAPAA
Sbjct: 78  DDGDYDYAPAASL---EGDDDDGDYDYAPAA 86

The following BLAST results are available for this feature:
BLAST of Cla97C11G209230 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599418.16.9e-1748.85hypothetical protein SDJN03_09196, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA8523059.11.1e-0650.00hypothetical protein F0562_009482 [Nyssa sinensis][more]
KGN60650.12.7e-0558.93hypothetical protein Csa_019209 [Cucumis sativus][more]
BLAST of Cla97C11G209230 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C11G209230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5J4ZYE25.4e-0750.00Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_009482 PE=4 SV=1[more]
A0A0A0LF411.3e-0558.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005960 PE=4 SV=1[more]
M1BUQ23.3e-0442.86Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
BLAST of Cla97C11G209230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37077FAMILY NOT NAMEDcoord: 1..70
coord: 100..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G209230.2Cla97C11G209230.2mRNA