Cla97C10G204480 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C10G204480
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Heat shock protein DnaJ, cysteine-rich domain-containing protein
Location	Cla97Chr10: 33882467 .. 33883068 (-)
RNA-Seq Expression	Cla97C10G204480
Synteny	Cla97C10G204480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCTTGTGTTCATCTCCTCGCATTTCTTCTACCGAACCCATCAAACAACCGCTCGCCGCCGCCCCTTTTCCACCCTCCAATCACCCAATAAGACCGTCGGCGCTGTCCCTCCGTCAAATTACCCGCAAGCACAAGAGAATTTCTACAGTGGTCGCCGCCATCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCGGCGCCGTCGCTGTGGCTCTCGTCGGAACCGCCTTCCCTGTCCTCTTCTCTCGCAAAGACCTGTAAGCAAAATTAAATTAACAAATTCGGTTTATTACCATAAAATCTGCCGTGTCTCTGCAGTGGGATTCTGTTTCACCGCATCAATTAAACAAACTTCCCATTTGCAATGATTTAAAGAGGGGTTTTCAATTTCAATGGTTGAGGTATTAATTGCGGGCGTGGTGTTTTAAATTTGTGGTCTGGTCCTCCGTAGGTGCCCGGAATGCGACGGCGCGGGGTTTGTCCGGCGATCGGGGGCGGCGCTGAGGGCAAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAG

mRNA sequence

ATGGCATCCTTGTGTTCATCTCCTCGCATTTCTTCTACCGAACCCATCAAACAACCGCTCGCCGCCGCCCCTTTTCCACCCTCCAATCACCCAATAAGACCGTCGGCGCTGTCCCTCCGTCAAATTACCCGCAAGCACAAGAGAATTTCTACAGTGGTCGCCGCCATCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCGGCGCCGTCGCTGTGGCTCTCGTCGGAACCGCCTTCCCTGTCCTCTTCTCTCGCAAAGACCTGTGCCCGGAATGCGACGGCGCGGGGTTTGTCCGGCGATCGGGGGCGGCGCTGAGGGCAAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAG

Coding sequence (CDS)

ATGGCATCCTTGTGTTCATCTCCTCGCATTTCTTCTACCGAACCCATCAAACAACCGCTCGCCGCCGCCCCTTTTCCACCCTCCAATCACCCAATAAGACCGTCGGCGCTGTCCCTCCGTCAAATTACCCGCAAGCACAAGAGAATTTCTACAGTGGTCGCCGCCATCGGAGACGTCTCCGCCGACGGCACCACCTACTTGATCGCCGGCGCCGTCGCTGTGGCTCTCGTCGGAACCGCCTTCCCTGTCCTCTTCTCTCGCAAAGACCTGTGCCCGGAATGCGACGGCGCGGGGTTTGTCCGGCGATCGGGGGCGGCGCTGAGGGCAAATGCGGCTCGCAAAGACCAAACTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAACCAAGTGGACAAATAG

Protein sequence

MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVSADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGKLNQVDK

Homology

[Close]

BLAST of Cla97C10G204480 vs. NCBI nr
Match: XP_038905250.1 (uncharacterized protein LOC120091333 [Benincasa hispida])

HSP 1 Score: 245.0 bits (624), Expect = 3.8e-61
Identity = 126/135 (93.33%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLCS PRISSTEPIKQP  AAPFP SNHPIRPSALSLRQI+ KHKRIS VVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQPPTAAPFPSSNHPIRPSALSLRQISPKHKRISVVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. NCBI nr
Match: XP_023528629.1 (uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 9.3e-60
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLC+ PRISSTEPIKQ  AAAPFPPSN P+RPSALSLRQ + KH+RISTVVAAIGDVS
Sbjct: 60  MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 119

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 120 ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 179

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 180 CARCNGLGKLNQVDK 194

[Close]

BLAST of Cla97C10G204480 vs. NCBI nr
Match: XP_022935020.1 (uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 uncharacterized protein LOC111442008 [Cucurbita moschata] >KAG6580531.1 hypothetical protein SDJN03_20533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017282.1 hypothetical protein SDJN02_19145 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 240.4 bits (612), Expect = 9.3e-60
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLC+ PRISSTEPIKQ  AAAPFPPSN P+RPSALSLRQ + KH+RISTVVAAIGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. NCBI nr
Match: XP_008442527.1 (PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 4.6e-59
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLCS PRISSTEPIKQ  A APFPPSNHPIRPS LSLRQ +R HKRISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFP+ FSRKDLCPEC+GAGFVRRSG+ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. NCBI nr
Match: XP_022983996.1 (uncharacterized protein LOC111482446 [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-58
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLC+ PRISSTEPIKQ  AAAPFPPSN P+RPSALSLRQ + KH R STVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. ExPASy TrEMBL
Match: A0A6J1F9E5 (uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC111442008 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.5e-60
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLC+ PRISSTEPIKQ  AAAPFPPSN P+RPSALSLRQ + KH+RISTVVAAIGDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. ExPASy TrEMBL
Match: A0A1S3B5E7 (uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLCS PRISSTEPIKQ  A APFPPSNHPIRPS LSLRQ +R HKRISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFP+ FSRKDLCPEC+GAGFVRRSG+ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. ExPASy TrEMBL
Match: A0A6J1J3Y5 (uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLC+ PRISSTEPIKQ  AAAPFPPSN P+RPSALSLRQ + KH R STVVAA+GDVS
Sbjct: 1   MASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. ExPASy TrEMBL
Match: A0A0A0LDN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.2e-58
Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLCS PRISSTEPIKQ  A APFPPSNH I+PS LSLRQ +R HKRISTVVAA+GDVS
Sbjct: 1   MASLCSFPRISSTEPIKQSPAVAPFPPSNHSIKPSTLSLRQSSRNHKRISTVVAAVGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           +DGTTYLIAGA+AVALVGTAFP+LFSRKDLCPECDGAGFVRRS +ALRANAARKDQTQIV
Sbjct: 61  SDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRANAARKDQTQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           CARCNGLGKLNQVDK
Sbjct: 121 CARCNGLGKLNQVDK 135

[Close]

BLAST of Cla97C10G204480 vs. ExPASy TrEMBL
Match: A0A6J1HBY8 (uncharacterized protein LOC111461414 OS=Cucurbita moschata OX=3662 GN=LOC111461414 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MASLCSSPRISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVS 60
           MASLCS PRISS +PIK  LAAAPFPPSNHPIRPSALSLRQ +R  KR ST+VAAIGDVS
Sbjct: 1   MASLCSFPRISSADPIKH-LAAAPFPPSNHPIRPSALSLRQSSRNQKRTSTIVAAIGDVS 60

Query: 61  ADGTTYLIAGAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIV 120
           ADGTTYLIAGAVAVALVGTAFP+LFSRKDLCP CDGAGFVR+SGAALRANAARKDQ QIV
Sbjct: 61  ADGTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIV 120

Query: 121 CARCNGLGKLNQVDK 136
           C+RCNGLGKLNQVDK
Sbjct: 121 CSRCNGLGKLNQVDK 134

[Close]

BLAST of Cla97C10G204480 vs. TAIR 10
Match: AT5G02160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-34
Identity = 78/126 (61.90%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 10  ISSTEPIKQPLAAAPFPPSNHPIRPSALSLRQITRKHKRISTVVAAIGDVSADGTTYLIA 69
           +SST  +K   ++   P  N+ I P          K    S VVAA+GDVS+DGT YLI 
Sbjct: 12  VSSTNFLKHS-SSWGSPSPNNVILPK--------NKRSSSSVVVAAVGDVSSDGTIYLIG 71

Query: 70  GAVAVALVGTAFPVLFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVCARCNGLGK 129
           GA+AVALVGTAFP+LF RKD CPECDGAGFVR+ G  LRANAARKD  QIVCA CNGLGK
Sbjct: 72  GAIAVALVGTAFPILFKRKDTCPECDGAGFVRKGGVTLRANAARKDLPQIVCANCNGLGK 128

Query: 130 LNQVDK 136
           LNQ+DK
Sbjct: 132 LNQIDK 128

The following BLAST results are available for this feature:

BLAST of Cla97C10G204480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905250.1	3.8e-61	93.33	uncharacterized protein LOC120091333 [Benincasa hispida]	[more]
XP_023528629.1	9.3e-60	91.85	uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]	[more]
XP_022935020.1	9.3e-60	91.85	uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 unchar...	[more]
XP_008442527.1	4.6e-59	88.89	PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo]	[more]
XP_022983996.1	2.3e-58	90.37	uncharacterized protein LOC111482446 [Cucurbita maxima]	[more]

BLAST of Cla97C10G204480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C10G204480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9E5	4.5e-60	91.85	uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC1114420...	[more]
A0A1S3B5E7	2.2e-59	88.89	uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=...	[more]
A0A6J1J3Y5	1.1e-58	90.37	uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446...	[more]
A0A0A0LDN8	4.2e-58	88.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734100 PE=4 SV=1	[more]
A0A6J1HBY8	1.0e-56	88.15	uncharacterized protein LOC111461414 OS=Cucurbita moschata OX=3662 GN=LOC1114614...	[more]

BLAST of Cla97C10G204480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02160.1	2.5e-34	61.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR36389	OS05G0110100 PROTEIN	coord: 1..135
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 85..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G204480.1	Cla97C10G204480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane