Cla97C10G197990 (gene) Watermelon (97103) v2.5

Overview
NameCla97C10G197990
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionPolyketide cyclase/dehydrase and lipid transport superfamily protein
LocationCla97Chr10: 27846562 .. 27847111 (+)
RNA-Seq ExpressionCla97C10G197990
SyntenyCla97C10G197990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATTTTATTCAATAAAACTATTATAGTATGCCTTTGAATATTCAATTTTGTATTTAATATTTAGTTTATTTTATGCCACCATATTATGTTTGACCCTGCTCAAATGAATATGATTAACAAATTCATCATCCATTTATTCATATTTCGTTTCCTTCATGAACTGATGAAGAAAAGCTTACTGAAGTACACACATACATATAAGAACATACAAGAGGAGGCCTTTTTACAATTTATGTTGGTTTTATATATTGTTTAGATAGATAAAGGCTTGGCAGTGCTCCATGGATACCACACAAAATTATTATGGCATTTGTTGGCATTCAAAGGGCAGTCCACAAAAGCAGTAGCATTCCAATTGTAGCAAAGACTTATTTCATGTAATTGTTGAAGTCCACTCCAATAGTTGTAGTTGCATCGAACGGCTGGTGTTTTTCCAGTCTTTCCACTTATTGCTGCATAACCTTGAGTGCTTGA

mRNA sequence

ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGATAGATAAAGGCTTGGCAGTGCTCCATGGATACCACACAAAATTATTATGGCATTTGTTGGCATTCAAAGGGCAGTCCACAAAAGCATCCACTCCAATAGTTGTAGTTGCATCGAACGGCTGGTGTTTTTCCAGTCTTTCCACTTATTGCTGCATAACCTTGAGTGCTTGA

Coding sequence (CDS)

ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGATAGATAAAGGCTTGGCAGTGCTCCATGGATACCACACAAAATTATTATGGCATTTGTTGGCATTCAAAGGGCAGTCCACAAAAGCATCCACTCCAATAGTTGTAGTTGCATCGAACGGCTGGTGTTTTTCCAGTCTTTCCACTTATTGCTGCATAACCTTGAGTGCTTGA

Protein sequence

MAEWSKAPDSSSGLRERAWIDKGLAVLHGYHTKLLWHLLAFKGQSTKASTPIVVVASNGWCFSSLSTYCCITLSA
Homology
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BLAST of Cla97C10G197990 vs. TAIR 10
Match: AT1G64130.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 5.1e-05
Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 0 

Query: 1  MAEWSKAPDSSSGLRERAWI 21
          MAEWSKAPDSSSGLR+RAWI
Sbjct: 1  MAEWSKAPDSSSGLRKRAWI 20

The following BLAST results are available for this feature:
BLAST of Cla97C10G197990 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C10G197990 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C10G197990 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C10G197990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64130.15.1e-0595.00Polyketide cyclase/dehydrase and lipid transport superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G197990.1Cla97C10G197990.1mRNA