Cla97C10G196060 (gene) Watermelon (97103) v2.5

Overview
NameCla97C10G196060
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionDNA-directed RNA polymerase subunit
LocationCla97Chr10: 25745294 .. 25760120 (+)
RNA-Seq ExpressionCla97C10G196060
SyntenyCla97C10G196060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAAGAACAGCAAGATCAAATGAATCATGATATGAAGCATTCGAAAGATGGAGAAAATACGGTTCGATATCGACATTCCTTACCAAATTTCTCTGGTTGGTTGCCTTCTCCACCTACGTCAGTTTGATGAACTAGCGCGCCAGAAGGCGAGAGAATGAAGTTTTATTTTGTTTTAATTATTTTTTAAAGGAATTCAAAAGTTTCAAAACTAAATCGGTTGGAGTCAATTTAGAGATGTCCACGAGGCGGCTTTCCTGCTTCTCGTTCTCGTTCCCGTTCTCCATTTCATTCTTCGTTTCTATCAAATTTGTTACGTGGACGAGAGTGAAGATTTCCTGTAGGAAATTTGCAGGGACATTTTTTTCGTTTGATTTTTTTATAAAAAAATCAATTACCATAAATTATTATTATAAAAATATTTTAATTAAATGATTAACTTTTATAGGATTAATTAGTTCTACATACATGGAGAAATTATTCAAAAATTTGAAATTAAAAGAAATAATTATCTATCAAATTATTTATATATATAATCTGAATTTATTAGAATTCAAACATATATTTTTTTACACTAATTCAGACATATTTATTATTTTGACCATTAATTTTGAAAATTAAATATAATATTTATATAATAAAATAAATAATATAAAATTAAATTATTATAATAAATATAAGAAAAAATCTTAACCCCGTTCCCTTCCTATTTAGCTTTCGGGGAATTTTTTTCTCCCGCTCCCCCCTCATTCTCCCTCTAAATGGGGAAGCCTCATTCCCATGGAAAAAGTGGACATCTCTAGGTTATAACGTTTCTGTTTCATATTATTTCTTAAATGAACTAGTCTAAGTTATAACATTTCTGTTTCGTATTATTTCTTAAATGAACTAGTTTAATAATGGTTTATGTTTCTTGTTTTTGAAGTTTAAGGAATATTTTAAAAAAAGGACTGAATTTGAAAAATGGTAAAAAATTAATTTCTCCTATTTTGTTTTATTTGTATTTTACCGTTTCCAAAATTAACCCTTCTTAGCATTTGGCCTAATGGCATCACACGCTGAAGGTGACCTATTTCTACTAGAAGCAATTTTTTTTGTAAAAAAAATTCTTTTCAATTTTACTTTTTTTTTTAGGAATTAATTTTTTATACTGCCTTTGCCCCTTTCACGAAAATGATTGTAAATACAAAATTGTTAAAAATATTTATAAATAATAACAAATCATCACAGTCTATCTATAATAGATTACGATAGATTGTGATAAATTTCTATTGTATCTATCATGACATAGATAGACACAGATAAAAATTTTATTATAGTTGTAAATATTTTAGTAAATTTGTCTATATTTGAAAACAACTCTTCTCCTTTTTTATTTATTTATTATATTTTTTAACCTAATTCTATAACATTTAGATTTATATATTATTTTGATTTTCAAATTTTAAGTTTTCATCATTTGAATATTTTTCAATTTTTTATTTTTAATTTTTTTTTATGAATGTACTTTTTATATTATATTTTTTTTGTTTTTATTTATTATATTTATGTAGTTTTTTTTGTGTAAAAAACACCCTTCATTTAAAAGTTTAAAAATTACTGAACTTAAAAAAATTAAAAAAATACCCTTATTATTATATGAACATAAGTCATTAATACGGTTTTACTTCTTTGTTTTCGAACTTAAAACTTCAAATAAATTCATCATTAGTATGAGTATTTTAAAATTTTTTTAAAAAAATGAGTTATTTTTCCAAGGAGGTTTTAAATTTTAGGGTATTTTGAAACATTTGAGTTTAGGAGTAATTTTTTTAAACAAAATTTTAATGATTTTTATTGAAACCTAATGAAAAGGGTATTTTTGAACTATTTTTTGAAAGTTTAAAGATATTTTTAAAACTTTTAATCGTTTAAAGGTATTTTTGACACAAAATATAAAATTTAAAGACATTTTTTTTTTATATAATTTAGCAAAAGAAATCATCTGCCTACTATAATACCACAAAGAAAAAAACTTGTAAATTTGGTATGGTTGGCTTGTTTTTAGGAACTCAAAATGTCTATAATTGAATGAAAAATAACGTTCTCCTCGTGTTAGCACCATGTGAAGTTACTGATTCACTCCTAAGGTCTATCTGTGCGCCTATACAATGAAAGATAGTTCAATACTCGATACTCAGTAACTAAGAAAAAAAAATTAAACACATGGCAAAAAAGTTAATTTAAATTATTTTTATTAAAGCGAAATACACTTTTTATTCCTAGATTTGAGTTAAAATTTTAAAATAGACACTTTAATCCCTAAAGTTGGAAAAATGACCATCCTAATCCTAGACCATGTGAATAGTGTTCAATTAAATAGATGGATAAAATATAAGAAACACTCGATTAAATCAATCAACCCGACCCGAATAAGGTTTCTTCTATCCAATACATAGACACAAAAAAACTCTCTCGATTGTCGTCTAGCAGTCGTCACATCACTCCCACTCAGCCACCGTCGATTCAGCCGCCTTTACTGTCTACTACTCAACCACTGCGACGTCGACGTGGGAGAAGCCAGGAAGCAGGCTCGGCCTCTTCTCTGCTAACATCGGCAGAATCCGCGTCGACATCGGAGAAGTGACGCTCATCGAGGAAGTCGATTGCATCGCCAGGCTTAAAGGGCGAGTGTGCTGTACTTTCGGGCGGTTTATCCTCTGTTTTCTTTACTTACATCTCTGTTTTCTTTACTTACATATCTGTTTTTTAGCCTCTTATGGATTATTCCATTTCTTCAGGCGCCTTCCTCTCTTTTTTCTCTATCACGGTTGTCGGAGAAGTAACGATCCTTGGGGAAGTCTGATTTTGGTCGATACGTAATTCAACCATCGGTCCCCATTGTGGTTCTGTTCGCTGATATTTCAGGTAATCTCACTTACAAGGGGATTTGAACTGATTTATTCAATTGACCCAATAATGAATTTCCTGTTCTTGCGATGGGAAATTGTTGGCTGGCTTTAATCTGAGTTTCTTGTTGTTACCTCACTGATTGTTTACTTTGGGTGGGTTTCTTGTTGTTACAGTCATTAATTGTTGTTTAGTCTTGCTCTTGTTATTGAAAATTTATTTTTGGTATGCTGTATTGAACTGATTGTGATTGTTCGGGGTTGTGGATTTTTCCTTCTTAAATGCAATTAACTGATTGTTGTTGTTTCTGTCTCTCGATTGCCAATGTAGAAGAACATCCAGACTTTGATTAAAATCCTGATGAAAAACTTTGTTATTGAGAGAGGAGAAATAAGTCAGTTACTGTAAAAGGACCAAAACCAGACTTTGTTTTCCGAGATTATATTTTGGTTTACTGGTTTGAGAGGTTGAAGCTGCCGTATGATCTGTTTTAATTGCTAATCTTTTTAAGGGATTTCTGTAAAGCAATATTGGATCAATAAGGCAAATGGGTTTCAACTTTTAAGAAATCCCAAACTGAAGGTGAATTGATTTAATTGCTAATTTCCTTCTAATAGGGTTTTCTTGTGTACATCCATACCACGATTTTTTATAAGGCAATATTGAATTTTGATGTTGGATTGTGGTGAACTATACTAACACTTCCTCTCCATGAATCTCTCCAGTGTCCCACCCTCCTTCACACACCCTGACAGACTACCTAACCATGAATCGTAACCTCACCTTTCACCATGAAAGCCACCGTATATTATCACCATCAATATGAAATCCTTCACCATTGAAGTAGATGCATGTGGAGGGAGCTTGGGCCCATTGCCAACGAGCCAAGACCAATTTGTTGATTTATAACTCATAATATATTATACATATACGTTGGAAGGTTAGAAATACATTATATATATTACTGTTAGATCAATCTTCTCTTTAATGAAATGCTTATCTACCTCAATATGACTCGTTCTATCGTGTAGAAATTGGATTATGAGTTATCAAAATGACAACTTTATTGTCACAGTAAATTTGTATAGGTGTCTTCTGAAGGAACTCCAATTCTTTAAGTACCCTTTTGATCCATACACCCTCACAAATTCCATGTGCTAAAGCTCTAAATTTTAGAGCAACACTACTTCTTGTTGCCACACTCTATTCTTTGCTCCTCCATGTAACTAAGTTCGGTCCAACAAAGGAATAATAACATGAGGTAGATCTTCTTTGATCTATCTATAGCACTTCCTACTCAATCTACATGAGTAACTTCTGTTTGAAAGTGATGATGTTTTTCCCATGAGTTACTTTTAGATATCTCAAAATTCTATAAGCAATTTCAAAATGAATTTGTCCATGTGCATGAATAATTGACTTTCCATGCTTACAACATATGCAATATCAGGATGTGTATGAGATGGATTGACCTTCTAATAAGTCTCTGAAATTCTTGTCATTGATTTCTTTTGCTTTGGCAACTCGTAACTTTAGATTGGGCTCAATGGAAGTTTTTGGAACCTTACATCCAAGTAATCTTGTTTCTTCAGGTAAGTAATAACATATTTTCTTTGAATAACAAAGATACCATTCTTTGATCCTGCGAATTTCATTCCAAGAACTATTTTAATGTTCCCAGATCAACTTACATCCCTACAAATCACCAAACATTCCTCATCAGTGGGAATGTTTCTTCTCACATTGAAATGTGATTTATGAAAACGTTGCATTTATCTTGAGGTGTCCTTTTTTGTTGCATTCAATTTCTTATTCTTGTTTCATTATATTGAGTGGATTATGTGTTTGATATGTCAGATTATTGATTGATAGATGATGGCTTTGTGTTAGGACTTAGCAAATGGAGTTTTGCCCGACTTGTGGGAACATGTTGCAATTTGAGTTGCCTAATATGGGTAAATCTTCCAGATTCTTCTGCCCGACTTGTCCATATGTGTCCTACTTGGAGAACAGGGTATGTGCTGCTGAAATTTCTTTCTAGTAGCAAGGCCTCAAGTTGTCTAGCTTCCCTTTTTTTCCCATTACTTTCTTATGAGGTGACTTAAGGAGAGCATTCTCGTGGTTCTACTATTCAGGTAAAAATCAAAAGAAAGCAACATTTGGTAAAAAAGGAATTAGAACCCATAATCTCTGATGATGACATGAAAAATGCAGCTCAAACAGAAGGTATACATCCTTCTCTGTGCTTAGTGTTTGTTTTTGAATTAAAATTCTACCTGCTGGAGTTGGGCAAAAGATTTAATCATATAGCTAATGTAAGGACAACGACCTGATTCACCTTTAAAATTATTCAAGTGCTTATGCATATACACGTATATGGTAGGGCAAACTAGTGAAGCAGTTATATTTCCTTTAATTAAATGAAATTTACAGAGACTCCAAGTCACCAGAAGTCAACAAGTAGCAAGAAAGAAGGAATCCCACTGTCTGAAGTCATAATTGAATTGGAGTATTTTACAAACTAGCAACAATACTATTAACCCAAATAATGCTGTTCTCATCTTTGAACCTCCTTGAAGCTTTAAAAATGAAGTGCCTTAAAGCGTGCAACAAACTTCAAAACATTTCCATCTACTTGATCAACACTCAAGAAAAATATGGAGAGTTTGAGTCAATTAACCCTTCTAAAATGAAACACCTATTGAGCTAGAGGAACAATGAAAGATTGTCAGTGGTATAACAAGGTTAGATTCACTGATGTTGGAGAGAGATAGATCACTTGAAAACTTTGCATTTTCTGGGAAGCTTGACCTCCAATCCTCTTGCACAACTTTAGTAGGGTAGGTGCCTGTCTACGGGCTATAGATTGATTAAGTAGTTACCGAGAAAGACCCCGAAGGAGTGAGGCTTCATATATTATATATATACACATATATGTGTGTGAATAGATATATATATATAAAGAGACTAATGCTCTAAATACAAGATCAGGATAAAAGGACAATAGGAAAGATAAACTCATATTCAGGAATATTGGTTGAGGGAATTATGGATGATATGCACAGGACTGCCCACTACTCTGTTACCTGTATAAAGGTCCTCTTCTAAACCTCAAATTACAGCAAAAGGTATCCTTATATTGCACGTCTTTAGTTGAAATACACCATTAGATATGTAGCACTTTATTGTATAAGGGGGTTAACTTCTTAACTAACTTCCAGGAGCTTTCATCTATAGCATAAGAGCAACCCAAAATGAGTGATCTGTTAGGAACCAAGGTAGTATGGGTTACCTTTGTCCCACATTGATTAGAATGGGATGACCAATGTACTTAAGTGGCTTGGCTCTCTCACCACAATAGCTAGCTTTTGGAGTGTGGTTCTCCAAGGTGCTTAAGTACCTAATAATGGTATTGAGTTAGTATTGTTAGGAACCTTAGTTCTTGAGCATTGGCACAGCAGGCGGAGCTTTGCAACAACAGTGCCAAGGTGTGTGTATGGGCAACACACAGGTGAAGAGCAAGGCATGTGGCAACTCGTGGGTAGTGGACATGCGAGCAGGCGCATCACACCCATAGCATAGCGTGGGCAGGTGGCCCACGCCTCGTGCCCCAAGGCATGCGGCACGGCAAGTGTAGCGCAGACCGGCAGACACGCGCGAGCGGTACACTGGGCACGAGCACCTGGTGCACAAGTGGCGCACTCGAGAGTGCCGAGCCGTGTACGATGGGCAAAGAGAACACCCGAGGCTAGTAGGAGGTTAGCCTAGAGCCCTAGGTGATGTGGACATGTAGGCTAATGCATCACGACACCGGGCACGACGAGGGCAGACGGCCCATGCCCCGTGCTTAGAGGTTAGCACGGACAGATGCGCACACGGGACACTAGACGCGTGTGCCAACCAGCAAGCGCCGATAGGAGTGGCCCAGATTGGGCAACAGCGCAAGGCCAGGCAGACACACGGGCGTCACAGGCGCGCGCTAGGTGTCACGGTTGTACTTCTCCAACCGTGCGGCGCCATGACATTCTTTCACACATGGCCAGCCTAAAGGCTAACCTATAGCCAATACATTCTTTTCTCAAACCTTTATGCTTTGTTGGACCTTGGGCAAGTTCCAACTTCCTCGCCTGAACTTCCGCTCCTCTGGCTTCACGACTTGTCTCGAACGCCTGTTCGAATTATAACACACGTGGGCATTCTTTCGCCCATCAATGGCTTTGTCTCGAAGAACGTTCTCAACTCAACGCTTACACCCAGATTTACTCTCGACATTTCAGATCGCCCCTTCACACATTACAAGTTCCTCTTCCACATACATGCACGCTCGTCGGGGATCGACCCTTGGGTCGCTCGTATATATATCGGGACCAACAGGACATCCATCAACTCGGACATTATCTCGGTATGGCGACTCTTGCGACCATACCACGCCGTACGAGGATACTGTGCCGGAACCCGGCCATATATAGCAACCTCTAGTCCACCCGAGGAGGCGCAATGTCGGCACACCCGCGCCACCCGACACTGTCCTTGAGTTACTCCTCCTCACAGGAAGATGCTCGAGACGCGAAACTCGCCCACGCCATGACACACTCGTGTGCCATGTGGTAGCTCACTTAGGGCCTAAGGCCCAGGGGTGGTGGAGAGCCAACACTATGCCTTCCCCCTTATAGTACATTCTAAACATTTCCTTCTTTGACACCCATGTATATGCGACGTGGCGAGGGGTAACTCGCTCACGTAGAGCGCCCGTCTGACTTCCGATTGACACGGAACCTGACGTGCTTCCATCCTCTGTTGATATGGATCTAACTCTAGAGCCGTTCGTCCAAACTCACCACGATACCCTTACTTCTGAAGTCATGGCCCGGGGCCCCACGTGGCCCCTATTGAGCTTTGCTACTGACACTTGCCGATGGCATTGATGCTTGTCTTCTTACTTGTTGTTCAGCTTGACACGCTTATCCATTTATCTTGGTGTGTTGGGTGATGCACCATCCTCCTCGGTCGCATCACGGCACTTCTCTTGGCTCTCTGTCATTGCCAGATGTGTCGACATTCTTGTGTCGCCACTGCATTGTCTGCACACGTGGGGTCACAATCTACTATCTCCAAGTTAGATTGTGACACTAGGCAGCATGCACATGGTGTGCGGGAGACGCAACTTTGGTGCCATCCTGGCACAAGCGATCAAGCGCGAACCCAAGATGAGGCAAGCTTGATCTAGGACATAGGGAAGTGCAAGCCATCAAGCTCTTGACCATATAGCTTGTATGCACGACACGTGGTAGGCATTTTGAGACACTTAATAATATGAGATTATTATTAAGTGGGCTTGTCCAAATAAGCTAGAAAGCATGATTGTAGGCGAGAATGGTGGAAATCCATGATCATGGACATCATGGTGGTTATCCCCTAGTTTGTAGGAAGGTGGCCCTAAAAATAGACATAGTGGGAAGTGGATGCCTAATAATAGAGAGAAATGACCATGTTCCCCACCATCCTAAAATGTAGGAGATAAATGTGGAACATGGGAGAGTGGCCCTAATTACATGGGTAGTGGGTGGTTTTACCCCACTAGGGCCACTCCCACGTTTCTCTCCTACTATTGCTCCTCCCACGACTATATAAAGATGACCTTGGGGATTGTCCAAGGCACTCAATTTCTCACACGCTCACTCATTCCTTGAGTGTCTCGTTGAGTCACTTCTTGCAAAGGGAAGAGATCCCACGTGGGGAGACTTCTCGTCTCTAGTCTTGTAATTGTGGTTTTTACTACCTTTGATAATAAAGTGATAGTTTCCTCATATCGAATGTGTTCTCTCCTCCCCCTTTCCTAGCCTACACAAGGAGGCCACATTTTGTGAAGTTTAAAGGCGCTAGCCTTAGAGAGAGATCGGGAAGACACTCTAGCCTCCCTCGGGTACAAACGGGCCCATTTAGAAGGCCGGTCAAGGGAGAACCTTGGCGCTGCACGAGGTATTCCGCAGAAAAAAAAAAATTATATGCACTACGCTTCCGACTTTCACCCCTGTGACAAGTGGTATCAAAGCGTGGTGCGTATAATTTTTTTTGGTGGAATACCCCATGCGGTGCCAAGGTTCTCCCTTGACCAACCTTCTAAATTGGCCCTTTTGTACCCGAGGGAGGCTAGAGTGCCTTCCCGATCTCTTTCTAAGGCTTGCGCTGGCAAAGATGACACACAAGAGCTTGAGTGGAAATATAATCTTTATTATTATATGAAAACCAGTACTACAAGGGTGGAGCTTGGAGCTCTTTGGACAAGATACACTCAACCTAACACTACTGAAAAAGAGGATCTCACACCAATGCAATTGGACTTGTGAGACGTGTTTGGCTATCTCGGTGCCCTTGGACAATTCCCAAGTTTCACCATTTATATAGGAAGGGGAGGGGAAGTCGTGGATCCTATTTTTAGCCAAGAGGAGTGGCCTTGGTGAGCAAGTAACTGCCCACTTCCCATGATTTTCGGCCACTCCTTCCATGACTTGGACCACGTTCCTAAATAATAGGAAGGTAGGCCAAGTCATGAGAATTAGTCTCCAACTTCCTCTTCCCACCTTTTGTGACCCTCAAATCCGACCGTCTGCTTGGCGTCTCCGGTGGATGCCACGTGTCCCCACCCGTGTGCTTCCATGTTCGCCCAGATGCCGTGCTCGGGATCCCCTTGGTTGTCGTGCCAGGGATGCCTACGCGTTGCCCGTATGCGCGCCTAGTGGACGCCCCCTGCCCTTCCGTGGCGGGGTGCGCGCATGCGCGTGCTAACCTCTCATGCCACCCATGCACGCGCGCATTCTGGTGTCAGCCTCCATGGCGTCCGCCTGCGCACGAGCCGCCATGCCCTTCGTGCGCCTTCAACTTGCCTACGACTGTGCACCTCTATGGGGCATGCTGGCTTGTCATGCCGCTTGCGTGCCTGCATGCTGTGTTGACGTCTTTGGGGCGCGCTTTCCCCTGTCCGGCTAAACCCTCTGGCCGAGGTGTTGGCGAGCTCGACTCCCTACCTATTGCCAATTCTGGTGAGTCGTTGCCAAGCCTTGTTATCGCACATGTCCAACGATGACTGGGTCTACAAGCCTCTCCCCGATCTATTGCCAGGCTACCCCCAGTGGCTCCCTTGGCCACGCTCGAACCTTCGTGGGTATTCACTTCGAGAATTAGGGGTTTGATAAACCTCCCCCGGCTGATCTCCAATGTCCTCGTTGGAGGGTGAACTCCTCCTACTTTATTCGAACAGAAGAAAGAAAACAAGTCAGAACTACTTAGAACGTTGGTCGCTCCTTATTGGTGGTTCATGGGCGTAACGTGCATCACTCCGTGGATGTGTTTTCTGTGGAGCATGTTGCTTGAGCTCCTCGGTCGCAATGCCGTCAGAAAAGGGGACCCCTCGGGTCCATCTGCGCTCAGATTGCCGCATCGGGCCAATCCCTTGGATGGTGGTCGGTGCTAGACAGTGAGCGTTCATCGGCGCCGACTTGATTGGAACACACGCTTATATCGTCGTCATCACTGTTGCTATCAACCTGGATCACCTCGATCCCTTGCTCTAAGCCCTGTGCTTGGCCCACCTGTTGCTCTAGAGCATAAATTGACTAATCCATGTTTTGATTCAGCATCATGAGGGAATGTTCCTCAATTGTGGCTCGTAGCTAGCTAATCTCTCCCCGGAGTGAGGCCAACTCACTCCGTAGAGGCTGGGTAGCTAGCCGGATAGGGTCTTGTATGCTTGTTGAGCTCTCTCTCGCCTTGCCTTGGTGTGTGCGGACGTCCCTCCCCAAGCCTTTGACTACAGCGTCCATGTTGTGGCATGCCCTTCTGGGGGTGATCCCCCAGGGACTCATTGCCGCTGAGTTGCTCGGGGATCACCCCCTACCGCCGCATGCACACATGCACTTGCTGGCGAGCGACTTGGACGCAAGGTTCGCCAACATGGACACGGCAGTCAAAGGCTTGGGGAGGGACGTCTGCACACACCAAGGCAAGGCGGGAGAGAGCTCGACAAGCATACAAGACACTATCCGGCTAGCTACCCAGCCGTTATGGAGTGAGTTGGCCTCACTCTAGGGAGAGATCGGCTAGCTACGGGCCACCATCGAGGAACATTCCCTTATGATGCTGAATCATAACATGGAGCAGTCAATTTACGCTCTAGAGCAACAAGTGGGACAGGATGGCCAAGCGCAAGGTTTGGAACAAGGGATCGAGGTGATCGTGGTTGACAGTGACGACATGAGCGTGTGTTCCAATCAAGCCGGTGCCGACGAATGCTCACTATCTAGCACCGACCACCATCCAAGGGATTGCCACGATGCGGCATGCCCCGTTGGCGTCTTTGGGCTAAAGAAAATTGGGCTTCTGTCCCATAACCATCGACAAAAGAAGCTAAATTTTCCTTTCTACTAATATTTAGGCCTCCATTCGATGAGTAAGGGAGACTGTATTTCATCTACCAGATGACTCCCACCTTTGCCAATCTGATCCTTCCTAAAGAAGTTTCAGATGTATCTGGCAATTGCTGGTACAACTTTGCTGGAAAATTGGAATATTGAAAGATACTACAGGAGGAAATGAGAAAGGGTTGGCTGAGCTAATGTAAGACGCCTTCACTCCCCTATTTTGATAAATTAATAAAAGTCCAAAAGCAAATAAATAAAACTTCAGAATATCTAGAAGTTCAAGATTTAAAAACTTCTACATGTACGACCTTACGTGAACAGATTTGTTTTCCAGATTGTATAACTGTGTTCTTGAGTTCTAAGGAGGCAAAAACTTCTATACATTGATAATAAAACAATATCATTTGTCTTTGTAAAAGGGTGGATGAATCTTAATTTCCCTAAAGAATGAAACCTTCAACAATTTCCATCATCAAGCCTAGGAGAGAAATCTGATAAAAATTAGCAGCCACCAAGAGTGAGAAAAGGGAATATAAGGTCATATGCTCTTTTAGAACTGTGGAAGACAAGATATTCTCTCCAGAATCAAGTCAACGAAATCCCTGTGTATTTTACTATAAGCATTCTCCAAATCAAGCTTACGGATGAATCCTTTCTGGCCTTCTTTCTTCTGCTGGTGCATTTCGTAGTTTAACCTTAAGAGATGATTCATCTCTTCAATCTACGTCGGACATGGAGAAAATAGCTTTTGTCTTTTGTGAAGCTTATTAGTGTTCCCGGGTGCTTCCCATGCATCTTACTTGGCTCGAGAGGAAGATGTGTCCATCAAGTCTGTAAACTGGAAATATCTATCTGGGTGGTTGGATCTTAGTATGTTATGCTAAATTGCTCATCGTAGACAGGTCTGGGTAGTCTAGCCTTAGGAACTTAAATGTTTCAGCTTGTGGTTGTGTTGTACAACCAAGGGAAGGACTAGTAGGGGCTGGAATGGAATATCATTTATAGTCTAGAATTGGATATGAGGCTCTTTATTAGGAATGAGGGACCATAATGTCACGTGGTTAGCGTTTCAACCTAACCAACTGCGCTGCACTTGTGTAATCCTGCTGTCAAAGGTCACGCCAAGTAAGCCTATTGAAATTTAAGGATCGTTTCAATCGGGTGAGATTGGCAAAGGAAGTGGACTAGCAAGGAGGACTTAAGAGTTTGAGTGAATGAGAGCTTTAGAAAGGGAGCTTCACCAACCGGTGAGAGAACGCACAAGCTTTTGAAGTTGGCTTGTATTGCTAACTCTCTGTCTATGCGTTTACAAATGGGGGCCCCTCCTCATATTTTTATAAGGGGGCTTGCCGACTTAGACTTATGAAGACCGACTCACTATGTCGGTCAAGAGTGATCTAGACTCTTCTTCTATGTACAAGGGCGGAAATCCTATGTACAAGTCTAGACTCCACCGACTTAGGCCCCTGCTAGAACTATCTAGACCTATAGAGGGCCTTCTAGCTATTTACATGGATGTCCGACTGTCAAAGAAGGTTCTGGAATTGCCTAGCACGCTCCAGGGCTTATCGCACTCTCCAGCACTGTCGGGCGCCTACTCGGGTTCTCCAGGCTAGTCGGGAGGCGTCCAGCATATCCTCGCCCATTCGAGGTTCTTCTGAAGGCTTCTGGTGCTGTCAGGGCCTTGCGTGCACAGTCGAGACCATTCCCGTGTCTTTCAGAGTCTTCCCACGGCATCGGGCATCTGGGCATGGGTGCTGGCTTTGCCCAGCGGCCTGCCCGCCTCTCCAAACGCGTCCAGAGGCTTGCCGAGGTCTCTGGCCTTGTCCCGATGTGTCTAGAATCTTTCGGGACTTAATCGAGGCATTTGGGACTTTCCATGTGTCGAAGGATGCCGTTGGACGCATGGTCTCAAGGCGATGTACGCATGAGGCGTCGACGATATGCGTACACTGCTGGTACTTATGGGGCGCACATGCGTTGATCTCACTCTGAACACATCGTGGGTATGCGTCGAACTTGCACGCCTGGCAACTTTGCGTATGCGGGCATGTCATGCTGCTCACCCTTGCAGTTATGCGTGCATGCCGCATACTTATGGCTGGTTGCACAGCAACTCTGCCATGTGCCAACGCACATGGGCGTTTGTTAAGGCACTCGGTTGGGGGTCCGGCTATGTCGAAGGCACACGCCTGAGGCTTGGACGTGGCCCGATGACACTTGCATCCCGTCTACATGCGATGGCATCCTTCTGCAGCGGCTTTGTCAACGCCTTGACCCTTCACTCTCGACCTTCCCTTAGCGATGCGGAGCGAGTCAAAGGCGTTTGTGTCGCGGTTTGAAATTGCGTTATTTCCATCCGTGACAATAAGCTTCCCTTAAGCGCTCAAGATGCAGTTAACTCAAAACATGTTTATCATGTGGCTGAGCAAACTGTAGTTGCACTTGTCTTTGTGAAGAGTTAAGGTGAAGCAACCTAACATTAGAGTAGAATGGATGACTTGCAACTGAAAGACAGTTATTTGAATCAATATAACACACCATGTAATGGAAATCAAATGTTGGTCTAGATTCTGTAGTTCGTATAATTTGGGCCCCAATGGTGGTGGTTCAATTTGTCGCATAAACAGGAGCAACCAACTCCGGTCTCTCCCTTTCTGGGAAATGGCTGCCTCCACGAGCCTTCACGAGCACGTAATTGAGTGGATGGGGGAACTGTGAAGCACATGTGGAATAAGCAGGAGTTTCATGGTACAGTCTAAAAGAGGGTCATCTGGTCTGCCAAGAAAATTAGAATTGTCAATTCCATTAAATTGAGGTTCAGTCTGTAGTAACTTTTGCATAAAATGGAAAATGGACTGGACGATCACACAAAATCTGTAAAGTTTTTACGAGAGGGAGAAAGAAAATTTTATAGGTTGTGATCTCCTACAAGGACACGGGCGTCGAATAATATGGTGATTATTATAAAAAGAATAATATGGTGATTCATTTTTGAAAGTTGTACAACATTAGCATAGCCTTATTATCCTGCACAACTTACTATTATTATTATTATTCTGAATAGATGTAAAACATTACCATTCTTTTGTTTTCTGAAACTTATAGGTAGATGATATATTACAGAGAACGAGACGTTTTAGAATGATGTTCCTTTGTTGTTTATTTCTCTCTATTCTCTAAACAGGTTTTTGTTTTGTTTTTTTTTGTTTTTGCCTATACTGTAGCAACATGTCCAAATTGTGGGTTTGGCAAGGCTGCTTTTATACAAATACAACTGAGATCAGCTGATGAACCTGCTACAACATTTTACAAGTGCATGAACGAAAACTGTAGGCATAACTGGCGCGAGGATTAAGGGCCAAGTTTTTAACTACTCATTTTCTATTTTTTATTTTATTTAAAGTCATTTAGAAGTAATTTCTATGAATAAAATATATTTTTTAAACCTGAATAGCATTATAATTTATGAATCATGATGGCACTTCAGAATGAGAATCATGTCATAATTGTATTTCG

mRNA sequence

ATGAACGAAGAACAGCAAGATCAAATGAATCATGATATGAAGCATTCGAAAGATGGAGAAAATACGTCGTCACATCACTCCCACTCAGCCACCGTCGATTCAGCCGCCTTTACTGTCTACTACTCAACCACTGCGACGTCGACGTGGGAGAAGCCAGGAAGCAGGCTCGGCCTCTTCTCTGCTAACATCGGCAGAATCCGCGTCGACATCGGAGAAGTGACGCTCATCGAGGAAGTCGATTGCATCGCCAGGCTTAAAGGGCGAGTGTGCTGTACTTTCGGGCGGCGCCTTCCTCTCTTTTTTCTCTATCACGGTTGTCGGAGAAGTAACGATCCTTGGGGAAGTCTGATTTTGCAAATGGAGTTTTGCCCGACTTGTGGGAACATGTTGCAATTTGAGTTGCCTAATATGGGTAAATCTTCCAGATTCTTCTGCCCGACTTGTCCATATGTGTCCTACTTGGAGAACAGGGTAAAAATCAAAAGAAAGCAACATTTGGTAAAAAAGGAATTAGAACCCATAATCTCTGATGATGACATGAAAAATGCAGCTCAAACAGAAGCAACATGTCCAAATTGTGGGTTTGGCAAGGCTGCTTTTATACAAATACAACTGAGATCAGCTGATGAACCTGCTACAACATTTTACAAGTGCATGAACGAAAACTGTAGGCATAACTGGCGCGAGGATTAAGGGCCAAGTTTTTAACTACTCATTTTCTATTTTTTATTTTATTTAAAGTCATTTAGAAGTAATTTCTATGAATAAAATATATTTTTTAAACCTGAATAGCATTATAATTTATGAATCATGATGGCACTTCAGAATGAGAATCATGTCATAATTGTATTTCG

Coding sequence (CDS)

ATGAACGAAGAACAGCAAGATCAAATGAATCATGATATGAAGCATTCGAAAGATGGAGAAAATACGTCGTCACATCACTCCCACTCAGCCACCGTCGATTCAGCCGCCTTTACTGTCTACTACTCAACCACTGCGACGTCGACGTGGGAGAAGCCAGGAAGCAGGCTCGGCCTCTTCTCTGCTAACATCGGCAGAATCCGCGTCGACATCGGAGAAGTGACGCTCATCGAGGAAGTCGATTGCATCGCCAGGCTTAAAGGGCGAGTGTGCTGTACTTTCGGGCGGCGCCTTCCTCTCTTTTTTCTCTATCACGGTTGTCGGAGAAGTAACGATCCTTGGGGAAGTCTGATTTTGCAAATGGAGTTTTGCCCGACTTGTGGGAACATGTTGCAATTTGAGTTGCCTAATATGGGTAAATCTTCCAGATTCTTCTGCCCGACTTGTCCATATGTGTCCTACTTGGAGAACAGGGTAAAAATCAAAAGAAAGCAACATTTGGTAAAAAAGGAATTAGAACCCATAATCTCTGATGATGACATGAAAAATGCAGCTCAAACAGAAGCAACATGTCCAAATTGTGGGTTTGGCAAGGCTGCTTTTATACAAATACAACTGAGATCAGCTGATGAACCTGCTACAACATTTTACAAGTGCATGAACGAAAACTGTAGGCATAACTGGCGCGAGGATTAA

Protein sequence

MNEEQQDQMNHDMKHSKDGENTSSHHSHSATVDSAAFTVYYSTTATSTWEKPGSRLGLFSANIGRIRVDIGEVTLIEEVDCIARLKGRVCCTFGRRLPLFFLYHGCRRSNDPWGSLILQMEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDDMKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED
Homology
[Close]
BLAST of Cla97C10G196060 vs. NCBI nr
Match: XP_038903069.1 (DNA-directed RNA polymerase III subunit RPC10-like [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 7.1e-60
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNC FGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED
Sbjct: 61  MKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. NCBI nr
Match: XP_004141147.1 (DNA-directed RNA polymerase III subunit RPC10 [Cucumis sativus] >XP_008465337.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Cucumis melo] >XP_008465338.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Cucumis melo] >KGN59770.1 hypothetical protein Csa_002120 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.0e-59
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNC FGKAAFIQIQLRSADEPATTFYKCMNENCR NWRED
Sbjct: 61  MKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. NCBI nr
Match: KAG7029162.1 (DNA-directed RNA polymerase III subunit RPC10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.0 bits (606), Expect = 7.9e-59
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 119 QMEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDD 178
           +MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDD
Sbjct: 43  RMEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDD 102

Query: 179 DMKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           DMKNAAQTEATCPNCGFGKAAFIQIQLRSADEPA+TFYKCMNE+CR NWRED
Sbjct: 103 DMKNAAQTEATCPNCGFGKAAFIQIQLRSADEPASTFYKCMNEDCRQNWRED 154

[Close]
BLAST of Cla97C10G196060 vs. NCBI nr
Match: XP_022932603.1 (DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita moschata] >XP_022932604.1 DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita moschata] >XP_022972319.1 DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita maxima] >XP_022972320.1 DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita maxima] >XP_023539106.1 DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita pepo subsp. pepo] >XP_023539107.1 DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-58
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPA+TFYKCMNE+CR NWRED
Sbjct: 61  MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPASTFYKCMNEDCRQNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. NCBI nr
Match: KAG6597716.1 (DNA-directed RNA polymerase III subunit RPC10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-58
Identity = 133/230 (57.83%), Postives = 141/230 (61.30%), Query Frame = 0 

Query: 1   MNEEQQDQMNHDMKHSKDGENTSSHHSHSATVDSAAFTVYYSTTATSTWEKPGSRLGLFS 60
           MNEEQQDQMN+DM+HSKDG+N                                       
Sbjct: 1   MNEEQQDQMNNDMEHSKDGKN--------------------------------------- 60

Query: 61  ANIGRIRVDIGEVTLIEEVDCIARLKGRVCCTFGRRLPLFFLYHGCRRSNDPWGSLILQM 120
               R+R                    R   +FGR                 W     +M
Sbjct: 61  ----RVRY------------------VRKRLSFGR----------------TW-----RM 120

Query: 121 EFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDDM 180
           EFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDDM
Sbjct: 121 EFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDDM 148

Query: 181 KNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           KNAAQTEATCPNCGFGKAAFIQIQLRSADEPA+TFYKCMNE+CR NWRED
Sbjct: 181 KNAAQTEATCPNCGFGKAAFIQIQLRSADEPASTFYKCMNEDCRQNWRED 148

[Close]
BLAST of Cla97C10G196060 vs. ExPASy Swiss-Prot
Match: Q9Y2Y1 (DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapiens OX=9606 GN=POLR3K PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 0 

Query: 122 FCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISD-DDM 181
           FCP CGN L  E     +  RF C TCPYV  +  +V  ++   L  KE++ ++      
Sbjct: 4   FCPGCGNGLIVE--EGQRCHRFSCNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAAAW 63

Query: 182 KNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRE 230
           +N   T  +CP C   +A F+Q+Q RSADEP TTFYKC N  C H WR+
Sbjct: 64  ENVDSTAESCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108

[Close]
BLAST of Cla97C10G196060 vs. ExPASy Swiss-Prot
Match: Q9CQZ7 (DNA-directed RNA polymerase III subunit RPC10 OS=Mus musculus OX=10090 GN=Polr3k PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.5e-17
Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 0 

Query: 122 FCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISD-DDM 181
           FCP CGN L  E     +  RF C TCPYV  +  +V  ++   L  KE++ ++      
Sbjct: 4   FCPGCGNGLIVE--EGQRCHRFACNTCPYVHNITRKVTNRKYPKL--KEVDDVLGGAAAW 63

Query: 182 KNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRE 230
           +N   T   CP C   +A F+Q+Q RSADEP TTFYKC N  C H WR+
Sbjct: 64  ENVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108

[Close]
BLAST of Cla97C10G196060 vs. ExPASy Swiss-Prot
Match: Q04307 (DNA-directed RNA polymerase III subunit RPC10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPC11 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           + FCP+C NML     + G  +   C +CPY   +E  ++I  ++ L +KE++ ++    
Sbjct: 2   LSFCPSCNNMLLITSGDSGVYT-LACRSCPYEFPIEG-IEIYDRKKLPRKEVDDVLG-GG 61

Query: 180 MKNAAQTEATCPN---CGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
             N  QT+  CPN   CG   A F Q+Q+RSADEP TTFYKC+  NC H W+E+
Sbjct: 62  WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCV--NCGHRWKEN 110

[Close]
BLAST of Cla97C10G196060 vs. ExPASy Swiss-Prot
Match: Q2M2S7 (DNA-directed RNA polymerase III subunit RPC10 OS=Bos taurus OX=9913 GN=POLR3K PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 0 

Query: 122 FCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDDMK 181
           FCP CGN L  E     +  RF C TCPYV  +  +V   RK   +K+  + +      +
Sbjct: 4   FCPGCGNGLIVE--EGQRCHRFACNTCPYVHNVTRKV-TNRKYPKLKEVDDELGGAAAWE 63

Query: 182 NAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRE 230
           N   T   CP C   +A F+Q+Q R ADEP TTFYKC N  C H WR+
Sbjct: 64  NVDSTAEPCPKCEHPRAYFMQLQTRYADEPMTTFYKCCNAQCGHRWRD 108

[Close]
BLAST of Cla97C10G196060 vs. ExPASy Swiss-Prot
Match: O13896 (DNA-directed RNA polymerase III subunit RPC10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc11 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           M+FCPTCGN L   +   G+++ F C TCPY  +      +  +    +KE++ ++  ++
Sbjct: 1   MQFCPTCGNHLIVAVDEEGRNA-FDCRTCPY--HFPISTFLYSRHEFAQKEVDDVLGGEE 60

Query: 180 -MKNAAQTEATCPN--CGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
             ++  QTE TC N  C   +A F Q+Q+RSADEP +TFY+C    C+  WRE+
Sbjct: 61  AFESNQQTEVTCENTKCDNNRAYFFQLQIRSADEPMSTFYRC--TKCKFQWREN 109

[Close]
BLAST of Cla97C10G196060 vs. ExPASy TrEMBL
Match: A0A1S3CQ50 (DNA-directed RNA polymerase subunit OS=Cucumis melo OX=3656 GN=LOC103502981 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.9e-59
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNC FGKAAFIQIQLRSADEPATTFYKCMNENCR NWRED
Sbjct: 61  MKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. ExPASy TrEMBL
Match: A0A0A0LCM4 (DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G844880 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.9e-59
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNC FGKAAFIQIQLRSADEPATTFYKCMNENCR NWRED
Sbjct: 61  MKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. ExPASy TrEMBL
Match: A0A6J1IB59 (DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111470892 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.5e-59
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPA+TFYKCMNE+CR NWRED
Sbjct: 61  MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPASTFYKCMNEDCRQNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. ExPASy TrEMBL
Match: A0A6J1EXG3 (DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC111439113 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.5e-59
Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPA+TFYKCMNE+CR NWRED
Sbjct: 61  MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPASTFYKCMNEDCRQNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. ExPASy TrEMBL
Match: A0A6J1DDT5 (DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC111020128 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 9.4e-58
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYV +LENRVKIKRKQHL+KKELEPIISDDD
Sbjct: 1   MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVCHLENRVKIKRKQHLLKKELEPIISDDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           MK AAQTEATCPNC FGKAAFIQ+QLRSADEPATTFYKCMNENCRHNWRED
Sbjct: 61  MKTAAQTEATCPNCAFGKAAFIQLQLRSADEPATTFYKCMNENCRHNWRED 111

[Close]
BLAST of Cla97C10G196060 vs. TAIR 10
Match: AT4G07950.1 (DNA-directed RNA polymerase, subunit M, archaeal )

HSP 1 Score: 142.5 bits (358), Expect = 4.2e-34
Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGN+L++E    G SSRFFC TCPYV+ +E RV+IK+KQ LVKK +EP+++ DD
Sbjct: 1   MEFCPTCGNLLRYE---GGGSSRFFCSTCPYVANIERRVEIKKKQLLVKKSIEPVVTKDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           +  AA+TEA CP CG  KA F  +Q+RSADEP + FY+C+   C   WRE+
Sbjct: 61  IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWREE 106

[Close]
BLAST of Cla97C10G196060 vs. TAIR 10
Match: AT1G01210.1 (DNA-directed RNA polymerase, subunit M, archaeal )

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-33
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0 

Query: 120 MEFCPTCGNMLQFELPNMGKSSRFFCPTCPYVSYLENRVKIKRKQHLVKKELEPIISDDD 179
           MEFCPTCGN+L++E    G +SRFFC TCPYV+Y++ +V+IK+KQ LVKK +E +++ DD
Sbjct: 1   MEFCPTCGNLLRYE---GGGNSRFFCSTCPYVAYIQRQVEIKKKQLLVKKSIEAVVTKDD 60

Query: 180 MKNAAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWRED 231
           +  AA+TEA CP CG  KA F  +Q+RSADEP + FY+C+   C   WRE+
Sbjct: 61  IPTAAETEAPCPRCGHDKAYFKSMQIRSADEPESRFYRCL--KCEFTWREE 106

[Close]
BLAST of Cla97C10G196060 vs. TAIR 10
Match: AT2G38560.1 (transcript elongation factor IIS )

HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 0 

Query: 183 AAQTEATCPNCGFGKAAFIQIQLRSADEPATTFYKCMNENCRHNWR 229
           A+  +  C  CG  K  + Q+Q RSADEP TT+  C+  NC ++W+
Sbjct: 333 ASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCV--NCDNHWK 376

The following BLAST results are available for this feature:
BLAST of Cla97C10G196060 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903069.17.1e-6099.10DNA-directed RNA polymerase III subunit RPC10-like [Benincasa hispida][more]
XP_004141147.16.0e-5998.20DNA-directed RNA polymerase III subunit RPC10 [Cucumis sativus] >XP_008465337.1 ... [more]
KAG7029162.17.9e-5996.43DNA-directed RNA polymerase III subunit RPC10, partial [Cucurbita argyrosperma s... [more]
XP_022932603.11.3e-5897.30DNA-directed RNA polymerase III subunit RPC10-like [Cucurbita moschata] >XP_0229... [more]
KAG6597716.12.3e-5857.83DNA-directed RNA polymerase III subunit RPC10, partial [Cucurbita argyrosperma s... [more]
BLAST of Cla97C10G196060 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9Y2Y12.7e-1742.20DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapiens OX=9606 GN=POLR3K ... [more]
Q9CQZ74.5e-1742.20DNA-directed RNA polymerase III subunit RPC10 OS=Mus musculus OX=10090 GN=Polr3k... [more]
Q043072.3e-1640.35DNA-directed RNA polymerase III subunit RPC10 OS=Saccharomyces cerevisiae (strai... [more]
Q2M2S73.8e-1641.67DNA-directed RNA polymerase III subunit RPC10 OS=Bos taurus OX=9913 GN=POLR3K PE... [more]
O138961.5e-1537.72DNA-directed RNA polymerase III subunit RPC10 OS=Schizosaccharomyces pombe (stra... [more]
BLAST of Cla97C10G196060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CQ502.9e-5998.20DNA-directed RNA polymerase subunit OS=Cucumis melo OX=3656 GN=LOC103502981 PE=3... [more]
A0A0A0LCM42.9e-5998.20DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G844880 P... [more]
A0A6J1IB596.5e-5997.30DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111470892 ... [more]
A0A6J1EXG36.5e-5997.30DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC11143911... [more]
A0A6J1DDT59.4e-5894.59DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC1110201... [more]
BLAST of Cla97C10G196060 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G07950.14.2e-3457.66DNA-directed RNA polymerase, subunit M, archaeal [more]
AT1G01210.14.6e-3354.95DNA-directed RNA polymerase, subunit M, archaeal [more]
AT2G38560.11.2e-0441.30transcript elongation factor IIS [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 188..229
e-value: 7.5E-16
score: 68.7
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 188..228
e-value: 3.0E-17
score: 62.2
IPR001222Zinc finger, TFIIS-typePROSITEPS00466ZF_TFIIS_1coord: 190..227
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 186..228
score: 13.977114
IPR001529DNA-directed RNA polymerase, M/15kDa subunitSMARTSM00661rpol9cneucoord: 121..175
e-value: 7.0E-8
score: 42.2
IPR029401Nudix hydrolase, N-terminalPFAMPF14803Nudix_N_2coord: 122..153
e-value: 4.4E-7
score: 29.7
NoneNo IPR availableGENE3D2.20.25.10coord: 175..230
e-value: 1.1E-19
score: 71.6
NoneNo IPR availableGENE3D2.20.70.10coord: 119..153
e-value: 1.8E-6
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR11239:SF12DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10coord: 120..229
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 171..230
IPR012164DNA-directed RNA polymerase subunit/transcription factor SPANTHERPTHR11239DNA-DIRECTED RNA POLYMERASEcoord: 120..229
IPR019761DNA-directed RNA polymerase M, 15kDa subunit, conserved sitePROSITEPS01030RNA_POL_M_15KDcoord: 122..148
IPR034014Pol III subunit C11, C-terminal zinc ribbonCDDcd10509Zn-ribbon_RPC11coord: 182..229
e-value: 3.93593E-24
score: 88.7966

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G196060.2Cla97C10G196060.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006386 termination of RNA polymerase III transcription
biological_process GO:0042779 tRNA 3'-trailer cleavage
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005730 nucleolus
cellular_component GO:0005666 RNA polymerase III complex
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding