Cla97C10G190790 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCATAATCGTCATCTTTGGCTTTTTCTTGACAATTTTTGTATTCATCTCTTTCTTCGGCTTGTGCCTCTACATCTGTTTCCAATGTTACAACCAGGGGTTCCCAGAAGGCGAGCAACGTGGTAGTGGGAATGGAGAAACGACGACGACGACAACAACAACAACGACAATGATGGATCCTGAGGAGCAGAATCGTCAGACTCAAATGGCTATGGAGAAATTGACAAAACCATCAGCAGAGTATGATTACGAGGAAAATGATGAATCTCCATCAACATTGAGTGAATGTGCGATTTGTTTGGAGGAATTTCAAGAAAGGGTCTCGTGTCGAGTTTTTCCTAATTGCAAACATATGTTTCATACTCATTGCATTATCAATTGGTTAGGGATTAATCAAACTTGTCCAATATGTCGAACTCAGTTGTAG ATGCCCATAATCGTCATCTTTGGCTTTTTCTTGACAATTTTTGTATTCATCTCTTTCTTCGGCTTGTGCCTCTACATCTGTTTCCAATGTTACAACCAGGGGTTCCCAGAAGGCGAGCAACGTGGTAGTGGGAATGGAGAAACGACGACGACGACAACAACAACAACGACAATGATGGATCCTGAGGAGCAGAATCGTCAGACTCAAATGGCTATGGAGAAATTGACAAAACCATCAGCAGAGTATGATTACGAGGAAAATGATGAATCTCCATCAACATTGAGTGAATGGATTAATCAAACTTGTCCAATATGTCGAACTCAGTTGTAG ATGCCCATAATCGTCATCTTTGGCTTTTTCTTGACAATTTTTGTATTCATCTCTTTCTTCGGCTTGTGCCTCTACATCTGTTTCCAATGTTACAACCAGGGGTTCCCAGAAGGCGAGCAACGTGGTAGTGGGAATGGAGAAACGACGACGACGACAACAACAACAACGACAATGATGGATCCTGAGGAGCAGAATCGTCAGACTCAAATGGCTATGGAGAAATTGACAAAACCATCAGCAGAGTATGATTACGAGGAAAATGATGAATCTCCATCAACATTGAGTGAATGGATTAATCAAACTTGTCCAATATGTCGAACTCAGTTGTAG MPIIVIFGFFLTIFVFISFFGLCLYICFQCYNQGFPEGEQRGSGNGETTTTTTTTTTMMDPEEQNRQTQMAMEKLTKPSAEYDYEENDESPSTLSEWINQTCPICRTQL Homology
BLAST of Cla97C10G190790 vs. NCBI nr
Match: KAG6577374.1 (RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21 Identity = 71/143 (49.65%), Postives = 87/143 (60.84%), Query Frame = 0
BLAST of Cla97C10G190790 vs. NCBI nr
Match: XP_011652743.1 (uncharacterized protein LOC105435076 [Cucumis sativus] >KGN56259.2 hypothetical protein Csa_011552 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 3.3e-15 Identity = 62/116 (53.45%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of Cla97C10G190790 vs. NCBI nr
Match: KAG7031368.1 (RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12 Identity = 62/146 (42.47%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of Cla97C10G190790 vs. NCBI nr
Match: KAG6600728.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12 Identity = 62/146 (42.47%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of Cla97C10G190790 vs. ExPASy TrEMBL
Match: A0A0A0L7Y8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104940 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.3e-06 Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|