Cla97C10G190705 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C10G190705
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Reverse transcriptase
Location	Cla97Chr10: 9063386 .. 9064159 (-)
RNA-Seq Expression	Cla97C10G190705
Synteny	Cla97C10G190705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATTTTGATGTAGTATGGGGGATGGAATTCTTGCTCGAACACAAAGAGATACTGATGCCGCTGGCAAAGTGTTTGGTAATCACGGGTTCCACGCCCATAGTGGTTCATACTGACATTAAACAACCTAATGGGGTAAAGATGATCTCGGCCCTCCAACTCAAGAAAGGCCTCGCTCGCAATGAACCCACTTTCATGGCCATCTGGGTTGTGTCAGTCGAAACAGAAGGAGAGACCATTCTAAAAGTCATTTAATTTGTCCTAGAGGAATATTGGGATGTCATGCTGGACAGTCTGCCAAAGTCCTTACCTTCAAGAAGGAGGATCGACCACGAAATTGAATTGTCGCTAGGGGAAAAATCGCCTGAAAAGAATGCCTATCGAATGGCGCCTCCTGAGTTAGCAGAACTCCGGAAGCAGTTAGATGAGTTACTGAGCGCAGGGTTCATTCGTCCCGCAAAGACACCGTATGGAGCCCCAGTGTTGTTTCAGAAGAAGAAAGATGGAAGTCTTCAATTGTGTATTGACTATCGAGCCTTAAACAAGCTCACAGTTCGCAACAAGTACCCTTTACCCATTATCACAGACCTATTTGACTGCCTCCATGGCGACAAATATTTTTCGAAACTCGACCTTCAATCAGGGTACTACCAGGTGCGAATTGTCAAAGAAGATGAGCCAAAGACGACCTGTGTCACGAGATATGGGACCGAATTCCTCGTAATGCCCTTTGGCCTCACTAACGCCCCCCGGCTACCTTCTGTACTCTGA

mRNA sequence

ATGGATGATTTTGATGTAGTATGGGGGATGGAATTCTTGCTCGAACACAAAGAGATACTGATGCCGCTGGCAAAGTGTTTGGTAATCACGGGTTCCACGCCCATAGTGGTTCATACTGACATTAAACAACCTAATGGGGTAAAGATGATCTCGGCCCTCCAACTCAAGAAAGGCCTCGCTCGCAATGAACCCACTTTCATGGCCATCTGGGTTGTTCTGCCAAAGTCCTTACCTTCAAGAAGGAGGATCGACCACGAAATTGAATTGTCGCTAGGGGAAAAATCGCCTGAAAAGAATGCCTATCGAATGGCGCCTCCTGAGTTAGCAGAACTCCGGAAGCAGTTAGATGAGTTACTGAGCGCAGGGTTCATTCGTCCCGCAAAGACACCGTATGGAGCCCCAGTGTTGTTTCAGAAGAAGAAAGATGGAAGTCTTCAATTGTGTATTGACTATCGAGCCTTAAACAAGCTCACAGTTCGCAACAAGTACCCTTTACCCATTATCACAGACCTATTTGACTGCCTCCATGGCGACAAATATTTTTCGAAACTCGACCTTCAATCAGGGTACTACCAGGTGCGAATTGTCAAAGAAGATGAGCCAAAGACGACCTGTGTCACGAGATATGGGACCGAATTCCTCGTAATGCCCTTTGGCCTCACTAACGCCCCCCGGCTACCTTCTGTACTCTGA

Coding sequence (CDS)

ATGGATGATTTTGATGTAGTATGGGGGATGGAATTCTTGCTCGAACACAAAGAGATACTGATGCCGCTGGCAAAGTGTTTGGTAATCACGGGTTCCACGCCCATAGTGGTTCATACTGACATTAAACAACCTAATGGGGTAAAGATGATCTCGGCCCTCCAACTCAAGAAAGGCCTCGCTCGCAATGAACCCACTTTCATGGCCATCTGGGTTGTTCTGCCAAAGTCCTTACCTTCAAGAAGGAGGATCGACCACGAAATTGAATTGTCGCTAGGGGAAAAATCGCCTGAAAAGAATGCCTATCGAATGGCGCCTCCTGAGTTAGCAGAACTCCGGAAGCAGTTAGATGAGTTACTGAGCGCAGGGTTCATTCGTCCCGCAAAGACACCGTATGGAGCCCCAGTGTTGTTTCAGAAGAAGAAAGATGGAAGTCTTCAATTGTGTATTGACTATCGAGCCTTAAACAAGCTCACAGTTCGCAACAAGTACCCTTTACCCATTATCACAGACCTATTTGACTGCCTCCATGGCGACAAATATTTTTCGAAACTCGACCTTCAATCAGGGTACTACCAGGTGCGAATTGTCAAAGAAGATGAGCCAAAGACGACCTGTGTCACGAGATATGGGACCGAATTCCTCGTAATGCCCTTTGGCCTCACTAACGCCCCCCGGCTACCTTCTGTACTCTGA

Protein sequence

MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLARNEPTFMAIWVVLPKSLPSRRRIDHEIELSLGEKSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRALNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGTEFLVMPFGLTNAPRLPSVL

Homology

[Close]

BLAST of Cla97C10G190705 vs. NCBI nr
Match: KAA0036604.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 6.0e-99
Identity = 191/252 (75.79%), Postives = 204/252 (80.95%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 512 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 571

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 572 RDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGP 631

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQKKKDGSL+LCIDYRA
Sbjct: 632 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 691

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFDCLHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 692 LNKLTVRNKYPLPIITDLFDCLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 751

[Close]

BLAST of Cla97C10G190705 vs. NCBI nr
Match: TYK28653.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97
Identity = 190/252 (75.40%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 1   MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 60

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 61  RDEPTFMAIPLNSSENSGETVSKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 120

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQKKKDGSL+LCIDYRA
Sbjct: 121 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 180

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 181 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 240

[Close]

BLAST of Cla97C10G190705 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97
Identity = 190/252 (75.40%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 515 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 574

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 575 RDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 634

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQKKKDGSL+LCIDYRA
Sbjct: 635 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 694

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 695 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 754

[Close]

BLAST of Cla97C10G190705 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 3.3e-97
Identity = 189/252 (75.00%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 541 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 600

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 601 RDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 660

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQ+KKDGSL+LCIDYRA
Sbjct: 661 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRA 720

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 721 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 780

[Close]

BLAST of Cla97C10G190705 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 3.3e-97
Identity = 189/252 (75.00%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 545 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 604

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 605 RDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 664

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQ+KKDGSL+LCIDYRA
Sbjct: 665 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRA 724

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 725 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 784

[Close]

BLAST of Cla97C10G190705 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 0


Query: 36  VVHTDIKQPNGVKMISALQLKKGLARNEPTF--MAIWV------VLPKSLPSRRR----- 95
           ++  D K  N V  I +++       N+ TF  + +W+      ++   LP R       
Sbjct: 523 ILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADINNI 582

Query: 96  -IDHEIELSLGEKSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKK 155
            + H+IE+  G + P    Y +      E+ K + +LL   FI P+K+P  +PV+   KK
Sbjct: 583 PVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKK 642

Query: 156 DGSLQLCIDYRALNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEP 215
           DG+ +LC+DYR LNK T+ + +PLP I +L   +   + F+ LDL SGY+Q+ +  +D  
Sbjct: 643 DGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRY 702

Query: 216 KTTCVTRYGT-EFLVMPFGLTNAP 225
           KT  VT  G  E+ VMPFGL NAP
Sbjct: 703 KTAFVTPSGKYEYTVMPFGLVNAP 726

[Close]

BLAST of Cla97C10G190705 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 0


Query: 36  VVHTDIKQPNGVKMISALQLKKGLARNEPTF--MAIWV------VLPKSLPSRRR----- 95
           ++  D K  N V  I +++       N+ TF  + +W+      ++   LP R       
Sbjct: 549 ILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADINNI 608

Query: 96  -IDHEIELSLGEKSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKK 155
            + H+IE+  G + P    Y +      E+ K + +LL   FI P+K+P  +PV+   KK
Sbjct: 609 PVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKK 668

Query: 156 DGSLQLCIDYRALNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEP 215
           DG+ +LC+DYR LNK T+ + +PLP I +L   +   + F+ LDL SGY+Q+ +  +D  
Sbjct: 669 DGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRY 728

Query: 216 KTTCVTRYGT-EFLVMPFGLTNAP 225
           KT  VT  G  E+ VMPFGL NAP
Sbjct: 729 KTAFVTPSGKYEYTVMPFGLVNAP 752

[Close]

BLAST of Cla97C10G190705 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 144 SLQLCIDYRALNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKT 203
           SL++CIDYRAL K+T++NKYP+P + DLFD L    +F+KLDL+SGY+QVRI K DEPKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 204 TCVTRYGT-EFLVMPFGLTNA 224
           TCVTRYG+ EF VMPFGLTNA
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNA 85

[Close]

BLAST of Cla97C10G190705 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 73  LPKSLPSRRRIDHEIELSLGEKSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYG 132
           LPK +   + ++ E+EL+          Y + P ++  +  ++++ L +G IR +K    
Sbjct: 393 LPKPI---KGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINA 452

Query: 133 APVLFQKKKDGSLQLCIDYRALNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQ 192
            PV+F  KK+G+L++ +DY+ LNK    N YPLP+I  L   + G   F+KLDL+S Y+ 
Sbjct: 453 CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHL 512

Query: 193 VRIVKEDEPKTTCVTRYGT-EFLVMPFGLTNAP 225
           +R+ K DE K       G  E+LVMP+G++ AP
Sbjct: 513 IRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542

[Close]

BLAST of Cla97C10G190705 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 73  LPKSLPSRRRIDHEIELSLGEKSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYG 132
           LPK +   + ++ E+EL+          Y + P ++  +  ++++ L +G IR +K    
Sbjct: 393 LPKPI---KGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINA 452

Query: 133 APVLFQKKKDGSLQLCIDYRALNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQ 192
            PV+F  KK+G+L++ +DY+ LNK    N YPLP+I  L   + G   F+KLDL+S Y+ 
Sbjct: 453 CPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHL 512

Query: 193 VRIVKEDEPKTTCVTRYGT-EFLVMPFGLTNAP 225
           +R+ K DE K       G  E+LVMP+G++ AP
Sbjct: 513 IRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542

[Close]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL
Match: A0A5A7SZ91 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001280 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99
Identity = 191/252 (75.79%), Postives = 204/252 (80.95%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 512 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 571

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 572 RDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGP 631

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQKKKDGSL+LCIDYRA
Sbjct: 632 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 691

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFDCLHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 692 LNKLTVRNKYPLPIITDLFDCLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 751

[Close]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.1e-98
Identity = 190/252 (75.40%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 515 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 574

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 575 RDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 634

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQKKKDGSL+LCIDYRA
Sbjct: 635 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 694

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 695 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 754

[Close]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL
Match: A0A5D3DY42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00110 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.1e-98
Identity = 190/252 (75.40%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 1   MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 60

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 61  RDEPTFMAIPLNSSENSGETVSKEIVRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 120

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQKKKDGSL+LCIDYRA
Sbjct: 121 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 180

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 181 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 240

[Close]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97
Identity = 189/252 (75.00%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 545 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 604

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 605 RDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 664

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQ+KKDGSL+LCIDYRA
Sbjct: 665 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRA 724

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 725 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 784

[Close]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97
Identity = 189/252 (75.00%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 1   MDDFDVVWGMEFLLEHKEILMPLAKCLVITGSTPIVVHTDIKQPNGVKMISALQLKKGLA 60
           MDDFDVV GMEFLLEH+ I MPLAKCLVITG TP VV TD++QP+G+KMISA+QLKKGL+
Sbjct: 545 MDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 604

Query: 61  RNEPTFMAIWV---------------------------VLPKSLPSRRRIDHEIELSLGE 120
           R+EPTFMAI +                            LPKSLP RR IDHEIEL  G 
Sbjct: 605 RDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGA 664

Query: 121 KSPEKNAYRMAPPELAELRKQLDELLSAGFIRPAKTPYGAPVLFQKKKDGSLQLCIDYRA 180
           K P KNAYRMAPPELAELRKQLDELL+AGFIRPAK PYGAPVLFQ+KKDGSL+LCIDYRA
Sbjct: 665 KPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRA 724

Query: 181 LNKLTVRNKYPLPIITDLFDCLHGDKYFSKLDLQSGYYQVRIVKEDEPKTTCVTRYGT-E 225
           LNKLTVRNKYPLPIITDLFD LHG KYFSKLDL+SGYYQVRI + DEPKTTCVTRYG  E
Sbjct: 725 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 784

The following BLAST results are available for this feature:

BLAST of Cla97C10G190705 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036604.1	6.0e-99	75.79	polyprotein [Cucumis melo var. makuwa]	[more]
TYK28653.1	1.5e-97	75.40	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK07954.1	1.5e-97	75.40	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	3.3e-97	75.00	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	3.3e-97	75.00	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]

BLAST of Cla97C10G190705 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.3e-27	34.80	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.3e-27	34.80	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P31843	4.8e-27	70.37	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
P0CT41	3.0e-21	35.29	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.0e-21	35.29	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZ91	2.9e-99	75.79	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001280 P...	[more]
A0A5D3C9P8	7.1e-98	75.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5D3DY42	7.1e-98	75.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A5D3C4R1	1.6e-97	75.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	1.6e-97	75.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cla97C10G190705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 83..222 e-value: 1.5E-51 score: 176.7
None	No IPR available	PANTHER	PTHR15503:SF11	RETROTRANSPOSON GAG-LIKE PROTEIN 6	coord: 65..224
None	No IPR available	CDD	cd01647	RT_LTR	coord: 122..224 e-value: 2.03311E-45 score: 147.742
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 163..225 e-value: 1.5E-51 score: 176.7
IPR032567	LDOC1-related	PANTHER	PTHR15503	LDOC1 RELATED	coord: 65..224
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 66..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G190705.1	Cla97C10G190705.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding