Cla97C10G184660 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C10G184660
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	RING-H2 finger protein ATL80
Location	Cla97Chr10: 188831 .. 189376 (-)
RNA-Seq Expression	Cla97C10G184660
Synteny	Cla97C10G184660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA

mRNA sequence

ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA

Coding sequence (CDS)

ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA

Protein sequence

MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP

Homology

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_038904164.1 (RING-H2 finger protein ATL80-like [Benincasa hispida])

HSP 1 Score: 347.8 bits (891), Expect = 5.6e-92
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           MTRYIRALA NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGS 
Sbjct: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKSTGGEGKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFL 180
           VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNN   EEVEDNNRGLGFL
Sbjct: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNN---EEVEDNNRGLGFL 178

Query: 181 P 182
           P
Sbjct: 181 P 178

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_008449155.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0052906.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa] >TYK11360.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 167/184 (90.76%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGL 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN EEEEVEDN   NRGL
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNN-EEEEVEDNNNDNRGL 178

Query: 181 GFLP 182
           GFLP
Sbjct: 181 GFLP 178

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_004146217.1 (RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031738026.1 RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031745531.1 RING-H2 finger protein ATL80-like [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 5.6e-84
Identity = 166/187 (88.77%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NN 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQGG AHNN EEEEVED      NN
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNN-EEEEVEDNINNNNNN 180

Query: 181 RGLGFLP 182
           RGLGFLP
Sbjct: 181 RGLGFLP 181

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: KAE8637404.1 (hypothetical protein CSA_023381 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 163/187 (87.17%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ + +AL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 485 MSNFRQALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 544

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 545 GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 604

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NN 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQGG AHNN EEEEVED      NN
Sbjct: 605 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNN-EEEEVEDNINNNNNN 664

Query: 181 RGLGFLP 182
           RGLGFLP
Sbjct: 665 RGLGFLP 665

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_023539225.1 (RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 4.6e-78
Identity = 156/194 (80.41%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY +ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYFQALAGNTSSATATATAPPPEAVAIESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  RG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEGKIAAECAICLAEFMEGEEIR 120
           RG   G  GNQASANRGLKKKILQSLPKF Y++  +GGEGK AAECAICLAEF++GEEIR
Sbjct: 101 RGSNSGGAGNQASANRGLKKKILQSLPKFTYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEV 180
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV GG  +N EE++  
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNNEEEQKRR 220

Query: 181 ED---NNRGLGFLP 182
           ED   NNRGLGFLP
Sbjct: 221 EDNNGNNRGLGFLP 234

[Close]

BLAST of Cla97C10G184660 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.6e-47
Identity = 105/186 (56.45%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR-- 60
           M R +  L   +++  P       AL SD VVILAALLCALIC++GLIAV+RC WLRR  
Sbjct: 1   MARLLFRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLA 60

Query: 61  -GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFME 120
            G  +V G+Q        A+AN+GLKKK+LQSLPK  +     E +  AECAICLAEF  
Sbjct: 61  AGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSA 120

Query: 121 GEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNE 172
           G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P    G ++   E
Sbjct: 121 GDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLP----GSSSSGLE 180

[Close]

BLAST of Cla97C10G184660 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-44
Identity = 98/189 (51.85%), Postives = 119/189 (62.96%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGG 60
           M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    
Sbjct: 1   MARLLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 61  SVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQL 120
           +  +Q      A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R L
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 121 PQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED 180
           PQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P    G ++   E +  ++ 
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLP----GSSSSGPEPDTRIKQ 180

Query: 181 NNRGLGFLP 182
              G   LP
Sbjct: 181 REDGPDNLP 185

[Close]

BLAST of Cla97C10G184660 vs. ExPASy Swiss-Prot
Match: Q9ZT49 (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-41
Identity = 93/176 (52.84%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG- 60
           MTR  R L   T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G 
Sbjct: 1   MTRSSRFL--GTASPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGV 60

Query: 61  ---SVGNQASANRGLKKKILQSLPKFRYK--------------STGGEGKIAAECAICLA 120
              +VG     N+GLKKK LQ+LPK  Y               S+ G+G  + ECAIC+ 
Sbjct: 61  NPAAVGEAPPPNKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICIT 120

Query: 121 EFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ 158
           EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +  +
Sbjct: 121 EFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAE 174

[Close]

BLAST of Cla97C10G184660 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-40
Identity = 94/178 (52.81%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG 60
           MTR  R L    ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR 
Sbjct: 1   MTRPSRLL---ETAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRF 60

Query: 61  GGSVGNQASANRGLKKKILQSLPKFRY---KSTGG---EGKIAAECAICLAEFMEGEEIR 120
               G+  S N+GLKKK LQSLP+  +   +ST G   E   + ECAICL +F +GEEIR
Sbjct: 61  TAG-GDSPSPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE 169
            LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG          AH ++  +
Sbjct: 121 VLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQ 174

[Close]

BLAST of Cla97C10G184660 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 66/124 (53.23%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASA----NRGLKKKILQSLP 83
           +++ V+ILAALLCALI  +GL ++ RCA +R G G   + A+       GLKK+ L+  P
Sbjct: 31  DANMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGTVADRAGLKKRELKKFP 90

Query: 84  KFRYKSTGGEGKIAA-ECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCR 143
              Y S  GE KIAA ECAICL EF +GE +R LP C H FH+SC+DTWL SHSSCP+CR
Sbjct: 91  VAEYGS--GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 150

[Close]

BLAST of Cla97C10G184660 vs. ExPASy TrEMBL
Match: A0A5D3CJ22 (RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00120 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.1e-85
Identity = 167/184 (90.76%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGL 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN EEEEVEDN   NRGL
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNN-EEEEVEDNNNDNRGL 178

Query: 181 GFLP 182
           GFLP
Sbjct: 181 GFLP 178

[Close]

BLAST of Cla97C10G184660 vs. ExPASy TrEMBL
Match: A0A1S3BKT0 (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.1e-85
Identity = 167/184 (90.76%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDN---NRGL 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN EEEEVEDN   NRGL
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNN-EEEEVEDNNNDNRGL 178

Query: 181 GFLP 182
           GFLP
Sbjct: 181 GFLP 178

[Close]

BLAST of Cla97C10G184660 vs. ExPASy TrEMBL
Match: A0A0A0L622 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 166/187 (88.77%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED------NN 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQGG AHNN EEEEVED      NN
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNN-EEEEVEDNINNNNNN 180

Query: 181 RGLGFLP 182
           RGLGFLP
Sbjct: 181 RGLGFLP 181

[Close]

BLAST of Cla97C10G184660 vs. ExPASy TrEMBL
Match: A0A6J1I6T7 (RING-H2 finger protein ATL8 OS=Cucurbita maxima OX=3661 GN=LOC111470152 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78
Identity = 156/194 (80.41%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY++ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYLQALAGNTSSATATATAPPPEAVAIESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  RG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEGKIAAECAICLAEFMEGEEIR 120
           RG  GG  GNQASANRGLKKKILQSLPKF Y++  +GGEGK AAECAICLAEF++GEEIR
Sbjct: 101 RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEV 180
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVV G   +N EE++  
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGDFPAVVHGDDHNNEEEQKRR 220

Query: 181 ED---NNRGLGFLP 182
           ED   NNRGLGFLP
Sbjct: 221 EDNNGNNRGLGFLP 234

[Close]

BLAST of Cla97C10G184660 vs. ExPASy TrEMBL
Match: A0A6J1F5B4 (RING-H2 finger protein ATL8 OS=Cucurbita moschata OX=3662 GN=LOC111440980 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.4e-77
Identity = 155/194 (79.90%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MTRYIRALAANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY +ALA NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 1   MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLR 60

Query: 61  RG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEGKIAAECAICLAEFMEGEEIR 120
           RG  GG  GNQASANRGLKKKILQSLPKF Y++  +GGE K AAECAICLAEF++GEEIR
Sbjct: 61  RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEV 180
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV GG  ++ EE++  
Sbjct: 121 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNDEEEQKRR 180

Query: 181 ED---NNRGLGFLP 182
           ED   NNRGLGFLP
Sbjct: 181 EDNNGNNRGLGFLP 194

[Close]

BLAST of Cla97C10G184660 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-48
Identity = 105/186 (56.45%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR-- 60
           M R +  L   +++  P       AL SD VVILAALLCALIC++GLIAV+RC WLRR  
Sbjct: 1   MARLLFRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLA 60

Query: 61  -GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFME 120
            G  +V G+Q        A+AN+GLKKK+LQSLPK  +     E +  AECAICLAEF  
Sbjct: 61  AGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSA 120

Query: 121 GEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNE 172
           G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P    G ++   E
Sbjct: 121 GDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLP----GSSSSGLE 180

[Close]

BLAST of Cla97C10G184660 vs. TAIR 10
Match: AT1G76410.1 (RING/U-box superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 4.2e-45
Identity = 98/189 (51.85%), Postives = 119/189 (62.96%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGG 60
           M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    
Sbjct: 1   MARLLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 61  SVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQL 120
           +  +Q      A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R L
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 121 PQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVED 180
           PQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P    G ++   E +  ++ 
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLP----GSSSSGPEPDTRIKQ 180

Query: 181 NNRGLGFLP 182
              G   LP
Sbjct: 181 REDGPDNLP 185

[Close]

BLAST of Cla97C10G184660 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 93/176 (52.84%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRRGGG- 60
           MTR  R L   T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR  G 
Sbjct: 1   MTRSSRFL--GTASPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGV 60

Query: 61  ---SVGNQASANRGLKKKILQSLPKFRYK--------------STGGEGKIAAECAICLA 120
              +VG     N+GLKKK LQ+LPK  Y               S+ G+G  + ECAIC+ 
Sbjct: 61  NPAAVGEAPPPNKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICIT 120

Query: 121 EFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ 158
           EF EGEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C +CG   +  +
Sbjct: 121 EFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAE 174

[Close]

BLAST of Cla97C10G184660 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-41
Identity = 94/178 (52.81%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG 60
           MTR  R L    ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR 
Sbjct: 1   MTRPSRLL---ETAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRF 60

Query: 61  GGSVGNQASANRGLKKKILQSLPKFRY---KSTGG---EGKIAAECAICLAEFMEGEEIR 120
               G+  S N+GLKKK LQSLP+  +   +ST G   E   + ECAICL +F +GEEIR
Sbjct: 61  TAG-GDSPSPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE 169
            LP CGH FHV C+D WL S SSCPSCR+IL   RC +CG          AH ++  +
Sbjct: 121 VLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQ 174

[Close]

BLAST of Cla97C10G184660 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 66/124 (53.23%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASA----NRGLKKKILQSLP 83
           +++ V+ILAALLCALI  +GL ++ RCA +R G G   + A+       GLKK+ L+  P
Sbjct: 31  DANMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGTVADRAGLKKRELKKFP 90

Query: 84  KFRYKSTGGEGKIAA-ECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCR 143
              Y S  GE KIAA ECAICL EF +GE +R LP C H FH+SC+DTWL SHSSCP+CR
Sbjct: 91  VAEYGS--GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 150

The following BLAST results are available for this feature:

BLAST of Cla97C10G184660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904164.1	5.6e-92	95.03	RING-H2 finger protein ATL80-like [Benincasa hispida]	[more]
XP_008449155.1	1.5e-84	90.76	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0052906.1 RING-H2 fin...	[more]
XP_004146217.1	5.6e-84	88.77	RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031738026.1 RING-H2 finger pr...	[more]
KAE8637404.1	1.8e-82	87.17	hypothetical protein CSA_023381 [Cucumis sativus]	[more]
XP_023539225.1	4.6e-78	80.41	RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C10G184660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM69	9.6e-47	56.45	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8LC69	5.9e-44	51.85	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
Q9ZT49	3.6e-41	52.84	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
O22755	6.7e-40	52.81	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9LZV8	1.6e-25	53.23	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]

BLAST of Cla97C10G184660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ22	7.1e-85	90.76	RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BKT0	7.1e-85	90.76	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1	[more]
A0A0A0L622	2.7e-84	88.77	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 P...	[more]
A0A6J1I6T7	2.9e-78	80.41	RING-H2 finger protein ATL8 OS=Cucurbita maxima OX=3661 GN=LOC111470152 PE=4 SV=...	[more]
A0A6J1F5B4	1.4e-77	79.90	RING-H2 finger protein ATL8 OS=Cucurbita moschata OX=3662 GN=LOC111440980 PE=4 S...	[more]

BLAST of Cla97C10G184660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20823.1	6.9e-48	56.45	RING/U-box superfamily protein	[more]
AT1G76410.1	4.2e-45	51.85	RING/U-box superfamily protein	[more]
AT4G35480.1	2.5e-42	52.84	RING-H2 finger A3B	[more]
AT2G17450.1	4.8e-41	52.81	RING-H2 finger A3A	[more]
AT5G01880.1	1.1e-26	53.23	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 92..146 e-value: 0.0056 score: 0.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..181
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 1..168
None	No IPR available	PANTHER	PTHR45798:SF61	E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED	coord: 1..168
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 76..144
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 96..137 e-value: 1.5E-5 score: 34.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 95..138 e-value: 3.9E-14 score: 52.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 96..138 score: 12.386007
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 59..142 e-value: 2.3E-24 score: 86.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G184660.1	Cla97C10G184660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane