Cla97C09G177259 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G177259
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionCytochrome c biogenesis FN
LocationCla97Chr09: 27074730 .. 27077572 (-)
RNA-Seq ExpressionCla97C09G177259
SyntenyCla97C09G177259
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAAGGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGTGTGGTTGGTGACTTTAAGAGTGAGGGTGAGAGGAAGAGGAAATCATGAGGGAGAGGGAGAGTGAGAGGAAGAGCTTGAGAATGGAAAAAAAAAATGGGGGAAATTCAAAAAAAGATGAGAAACAAAATGTGAGAAAAAAATAAAGTTGGGTAGGGTTTCAAAAAAGTGGGGGCAAAACTAAAATCTGAACTTAAGGGTTTTCTACCCGCCCAATTTACATTGACAAATACTAAAAGTTTCTAGCCACGCATGTGCGTGGGTAGAAACTAAAATAAGTATCGACAGAAACCTAAACCTAATGATTTTCACTAAAACCACACAACTTTTTGCCCATGCATATATTTTCATCGGTAGAAATGATGTGCCTACACATTGAAAATTCGTTGGTAGAATATAGCTCTGCCGACATCTTTTGTTGCGTTGGTAGAAAAAACCGTTGGCAGAGACGAAAGTTCTTGTAGTTAGGTCCTTTTACTAGCTCACAACGGGTAAAACAAGGATCAAGAGTTTTTAAAAAAATGAAATGTTTAAAATTAGTTAAAGAAAATTTATGTTAATTGTATAAAATACAATTAATATAATGTATAATGATATATTATAATATAAAGTTAGTTTTGAATGAAATAAAAAAATGAAACTATATAATATGAGAGTATAAATGTATTTGAATAAAATTCAAATAATAAATTAATATGAATAAGATTCACATTAAAACTATAGGTTATAGGTTATGAGGGAGAAGGGTATTTGAATATGATTCAAATAAATATTTAATTAAATATGAGATATTGATTAAATATATTGATTAATTAATTAATACAATTATTTATTAATTAAATGTTCTTAAATTAAATTAAAAAGAGAAATAAGTCTCTAACATTGCAGGGTGCGGGGAGTTACTCCCCCTCTCTCACTTTAAATTGTAGTGAATTTTGTATATTGAGGTTACCAATTTTTTACATGAAAAAAATATGGATAACTTCTTTCTCTTTCTCTCAACTTCTCTCACATTCACAAAACCCAGAGAACAAATTCTCTTTCTTTTTCGTATCTCTTTCAAAAGGAGGTTTCCATACAATTGATCCGTACTAGAGAATAGAAGGAAAGGTCTTTTGGTAGCATCTTGGTACGAGATTGATTGTTGAGGAGGTCCATATGTTGAGAAGAGAAAAGAATTGTAGCTAGAATTTGAAGAAGAGTCTTTGAAGGGTAATTTCTTTTCCTCAAACACTTCTTTGGAGAAAGCATGCTTAATTCTTTTGTATGGTTTTTTTTTTTTTTTTTCTCCTGTGTATTAATTCTTAAAAAATAATAATAATAAAGTGATCAATCACTTTAATTGTGGAATTGGATCCCTTCATGTTTAACCCCATCAGCGAGATTACTTACTGAGTATTTTTTAATACTCACTACCGCATATTTTTTTTAGGTAAGGGTAAAGGCTTGCGAGGGAGGTAAATAGTTGTTAATTGTGCTATCAAACCGTGTCTAATTGAGTTTTCGCTTTGCATATGCTTTGAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAACTTTTATAATTTATTTTTCCTTGTTTTTGGTGGGATCCAGAAAATAGAACCTTATTCTTCTTTCAGTGGGTTTGATTTATTCGTCTTAAATATTTGATTTTATCGTTTTAAATAAATTTTGATTTTGCATTCATGAATAACACTAGTACATTTTTCTCGAGAAAAATTAGGTCGTTACAATTACACTTGAAATTGTGAGATTTTGAATGAGTTAATGTACTAATGATATGCTTGAACAAATTGTATGCTTAATCTTTCATATATACAAGTCATTTAACTAATATACTACAAGTTATAGTTTACATTTAGAACGTTAGTAATACAACTAATATAGCAAATTAAATATAACTCTGATATTGTAATGACCCCAATTTTTTTTTTTTTATATTTTTAATTAACATAAATTAAGATAATTACTCCTAATTCATAATGGATTATTTTATAAAAAAATATAACTAATGCTTCTGTTAAAAATAAGTCTTATCATGCTAAATAAAACTTAAACTAAAAATTTTAGCAGTAGAAATCATAAAATAACAATATGTATTTAATAAGAAGTGAAAATAAAACAAAAAATATGGTTCTAGATTAATTAAACTAAACTTTGGGCAAGTTGTCTCATGGCTCCGTAGAAAATGCTTCTTTTATGCCTCGGGTATTAGCCACAACTCGTATTCATTCAGTCATTTTACCCCTTCTTCATTCTTGGACCTCATTTCTGAATATTGTGACTTTTTCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGATTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTTCTTCCTTCTAATGACCGGCATATCAATGATTCTTTTCTCCCAAATGAAGCAGCAGGCATCGGTCTGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTGTGCACCTATGTCTACATGACTATTTGAAAAATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTAATCCTCAGCGAACTCATCATCATCTACATGACTATTTGAAAAATGTAAAACCATACGAGGTAATATAAAAATACTTTGTAGGTGGCTCCTATCATAAGAAAGCTTCACACATCATGCTTGTATACGTATTCATATCCTTGATTGGGCGTCATGCTATGTAG

mRNA sequence

ATGAGCAAGGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGAACCTTTTCAATACGGTCCGGATTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTTCTTCCTTCTAATGACCGGCATATCAATGATTCTTTTCTCCCAAATGAAGCAGCAGGCATCGGTCTGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTGTGCACCTATGTCTACATGACTATTTGAAAAATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTGGCTCCTATCATAAGAAAGCTTCACACATCATGCTTGTATACGTATTCATATCCTTGATTGGGCGTCATGCTATGTAG

Coding sequence (CDS)

ATGAGCAAGGACATCTCTATAGGTGCGACCGTGGTGACAGACGACTTTGTAGGTGTAGTGAACGATTCTGTAAGTGCGACGATGGCGATGGACGAGCAAGATGATGGAACCTTTTCAATACGGTCCGGATTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGCGGTTCTTCCTTCTAATGACCGGCATATCAATGATTCTTTTCTCCCAAATGAAGCAGCAGGCATCGGTCTGTAGAACCTATAAGAAAGAGATGGTTGTGGCACGAAGTACTCTTGTGCACCTATGTCTACATGACTATTTGAAAAATGTAAAACCGCACGAGGTAGTATTTGAAAAATGTCATGGTGGCTCCTATCATAAGAAAGCTTCACACATCATGCTTGTATACGTATTCATATCCTTGATTGGGCGTCATGCTATGTAG

Protein sequence

MSKDISIGATVVTDDFVGVVNDSVSATMAMDEQDDGTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVVARSTLVHLCLHDYLKNVKPHEVVFEKCHGGSYHKKASHIMLVYVFISLIGRHAM
Homology
[Close]
BLAST of Cla97C09G177259 vs. NCBI nr
Match: QEM01536.1 (cytochrome C biogenesis factor N [Solanum tuberosum] >QPF97150.1 cytochrome c biogenesis factor N [Solanum ahanhuiri] >QPF97424.1 cytochrome c biogenesis factor N [Solanum tuberosum subsp. andigenum] >QPF97565.1 cytochrome c biogenesis factor N [Solanum x juzepczukii] >QPF97637.1 cytochrome c biogenesis factor N [Solanum chaucha] >QPF97871.1 cytochrome c biogenesis factor N [Solanum bukasovii])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 515 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 574

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 575 ARSTLVH--LRHSARAQKVGLIVFQACSGG 602

[Close]
BLAST of Cla97C09G177259 vs. NCBI nr
Match: YP_009682049.1 (cytochrome c biogenesis FN [Physochlaina orientalis] >QDQ38362.1 cytochrome c biogenesis FN [Physochlaina orientalis])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 491 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 550

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 551 ARSTLVH--LRHSARAQKVGLIVFQACSGG 578

[Close]
BLAST of Cla97C09G177259 vs. NCBI nr
Match: ATW72861.1 (ccmFN [Solanum commersonii] >AUS83394.1 CcmFN [Solanum tuberosum] >QPF97020.1 cytochrome c biogenesis factor N [Solanum stenotomum subsp. goniocalyx] >QPF97227.1 cytochrome c biogenesis factor N [Solanum phureja] >QPF97294.1 cytochrome c biogenesis factor N [Solanum stenotomum subsp. stenotomum] >QPF97357.1 cytochrome c biogenesis factor N [Solanum bukasovii] >QPF97710.1 cytochrome c biogenesis factor N [Solanum x curtilobum])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 501 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 560

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 561 ARSTLVH--LRHSARAQKVGLIVFQACSGG 588

[Close]
BLAST of Cla97C09G177259 vs. NCBI nr
Match: YP_009430473.1 (cytochrome c maturation protein CcmFN [Solanum lycopersicum] >YP_009430483.1 cytochrome c maturation protein CcmFN [Solanum pennellii] >ATD51578.1 cytochrome c maturation protein CcmFN [Solanum lycopersicum] >ATD51592.1 cytochrome c maturation protein CcmFN [Solanum lycopersicum] >ATD51632.1 cytochrome c maturation protein CcmFN [Solanum pennellii])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 501 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 560

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 561 ARSTLVH--LRHSARAQKVGLIVFQACSGG 588

[Close]
BLAST of Cla97C09G177259 vs. NCBI nr
Match: YP_009049706.1 (cytochrome c maturation protein CcmFN [Capsicum annuum] >AIG89890.1 cytochrome c maturation protein CcmFN [Capsicum annuum] >AIG90065.1 cytochrome c maturation protein CcmFN [Capsicum annuum] >QFV19555.1 cytochrome c maturation protein CcmFN [Capsicum annuum var. glabriusculum])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 501 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 560

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 561 ARSTLVH--LRHSARAQKVGLIVFQACSGG 588

[Close]
BLAST of Cla97C09G177259 vs. ExPASy Swiss-Prot
Match: Q04647 (Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-28
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GT SIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMV+
Sbjct: 496 GTSSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVM 555

Query: 96  ARSTLVHL 104
           ARSTLVHL
Sbjct: 556 ARSTLVHL 563

[Close]
BLAST of Cla97C09G177259 vs. ExPASy Swiss-Prot
Match: Q04648 (Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLA VHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTY+KEMVV
Sbjct: 494 GTFSIRSGLLASVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYQKEMVV 553

Query: 96  ARSTLVHL 104
           ARSTLVHL
Sbjct: 554 ARSTLVHL 561

[Close]
BLAST of Cla97C09G177259 vs. ExPASy Swiss-Prot
Match: Q33884 (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment) OS=Arabidopsis thaliana OX=3702 GN=CCMFN2 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-26
Identity = 63/68 (92.65%), Postives = 63/68 (92.65%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLA VHSFATDDTRGIFLW FFLLMTGI MILF QMKQQASV RTYKKEMVV
Sbjct: 120 GTFSIRSGLLASVHSFATDDTRGIFLWWFFLLMTGIFMILFYQMKQQASVRRTYKKEMVV 179

Query: 96  ARSTLVHL 104
           ARSTLVHL
Sbjct: 180 ARSTLVHL 187

[Close]
BLAST of Cla97C09G177259 vs. ExPASy Swiss-Prot
Match: P36180 (Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=YMF4 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-13
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQAS 85
           GTF +RSGLLA VHSFATD TRGIFLW FFLL+T IS + F +MKQQ+S
Sbjct: 395 GTFFVRSGLLASVHSFATDSTRGIFLWCFFLLITSISFLFFFKMKQQSS 443

[Close]
BLAST of Cla97C09G177259 vs. ExPASy Swiss-Prot
Match: Q9I3N2 (Cytochrome c-type biogenesis protein CcmF OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=ccmF PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.4e-05
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFS 78
           GTF +RSG+L  VH+FA+D  RG+F+  F LL+ G S+ LF+
Sbjct: 290 GTFLVRSGVLTSVHAFASDPERGVFILAFLLLVVGGSLTLFA 331

[Close]
BLAST of Cla97C09G177259 vs. ExPASy TrEMBL
Match: A0A290WKZ9 (CcmFn OS=Solanum lycopersicum OX=4081 GN=ccmFN PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 501 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 560

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 561 ARSTLVH--LRHSARAQKVGLIVFQACSGG 588

[Close]
BLAST of Cla97C09G177259 vs. ExPASy TrEMBL
Match: A0A7S9H4F1 (Cytochrome c biogenesis factor N OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=ccmFN PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 501 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 560

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 561 ARSTLVH--LRHSARAQKVGLIVFQACSGG 588

[Close]
BLAST of Cla97C09G177259 vs. ExPASy TrEMBL
Match: A0A0C5B9X0 (Cytochrome c biogenesis FN OS=Nicotiana tabacum/Hyoscyamus niger cybrid OX=1520274 GN=ccmFN PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 491 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 550

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 551 ARSTLVH--LRHSARAQKVGLIVFQACSGG 578

[Close]
BLAST of Cla97C09G177259 vs. ExPASy TrEMBL
Match: A0A7S9H578 (Cytochrome c biogenesis factor N OS=Solanum tuberosum subsp. andigenum OX=80418 GN=ccmFN PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 515 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 574

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 575 ARSTLVH--LRHSARAQKVGLIVFQACSGG 602

[Close]
BLAST of Cla97C09G177259 vs. ExPASy TrEMBL
Match: A0A5C1H778 (Cytochrome C biogenesis factor N OS=Solanum tuberosum OX=4113 GN=ccmFN PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASV RTYKKEMVV
Sbjct: 515 GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVRRTYKKEMVV 574

Query: 96  ARSTLVHLCLHDYLKNVKPHEVVFEKCHGG 126
           ARSTLVH  L    +  K   +VF+ C GG
Sbjct: 575 ARSTLVH--LRHSARAQKVGLIVFQACSGG 602

[Close]
BLAST of Cla97C09G177259 vs. TAIR 10
Match: AT2G07768.1 (Cytochrome C assembly protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.6e-29
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLW FFLLMTGISMILF QMKQQASV RTYKKEMVV
Sbjct: 71  GTFSIRSGLLAPVHSFATDDTRGIFLWWFFLLMTGISMILFYQMKQQASVRRTYKKEMVV 130

Query: 96  ARSTLVHL 104
           ARSTLVHL
Sbjct: 131 ARSTLVHL 138

[Close]
BLAST of Cla97C09G177259 vs. TAIR 10
Match: ATMG00960.1 (Cytochrome C assembly protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.6e-29
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 36  GTFSIRSGLLAPVHSFATDDTRGIFLWRFFLLMTGISMILFSQMKQQASVCRTYKKEMVV 95
           GTFSIRSGLLAPVHSFATDDTRGIFLW FFLLMTGISMILF QMKQQASV RTYKKEMVV
Sbjct: 120 GTFSIRSGLLAPVHSFATDDTRGIFLWWFFLLMTGISMILFYQMKQQASVRRTYKKEMVV 179

Query: 96  ARSTLVHL 104
           ARSTLVHL
Sbjct: 180 ARSTLVHL 187

The following BLAST results are available for this feature:
BLAST of Cla97C09G177259 vs. NCBI nr
Match NameE-valueIdentityDescription
QEM01536.12.1e-2881.11cytochrome C biogenesis factor N [Solanum tuberosum] >QPF97150.1 cytochrome c bi... [more]
YP_009682049.12.1e-2881.11cytochrome c biogenesis FN [Physochlaina orientalis] >QDQ38362.1 cytochrome c bi... [more]
ATW72861.12.1e-2881.11ccmFN [Solanum commersonii] >AUS83394.1 CcmFN [Solanum tuberosum] >QPF97020.1 cy... [more]
YP_009430473.12.1e-2881.11cytochrome c maturation protein CcmFN [Solanum lycopersicum] >YP_009430483.1 cyt... [more]
YP_009049706.12.1e-2881.11cytochrome c maturation protein CcmFN [Capsicum annuum] >AIG89890.1 cytochrome c... [more]
BLAST of Cla97C09G177259 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q046471.7e-2895.59Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1[more]
Q046482.2e-2895.59Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 ... [more]
Q338841.6e-2692.65Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment) ... [more]
P361805.7e-1373.47Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=Y... [more]
Q9I3N24.4e-0552.38Cytochrome c-type biogenesis protein CcmF OS=Pseudomonas aeruginosa (strain ATCC... [more]
BLAST of Cla97C09G177259 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A290WKZ91.0e-2881.11CcmFn OS=Solanum lycopersicum OX=4081 GN=ccmFN PE=3 SV=1[more]
A0A7S9H4F11.0e-2881.11Cytochrome c biogenesis factor N OS=Solanum stenotomum subsp. goniocalyx OX=1050... [more]
A0A0C5B9X01.0e-2881.11Cytochrome c biogenesis FN OS=Nicotiana tabacum/Hyoscyamus niger cybrid OX=15202... [more]
A0A7S9H5781.0e-2881.11Cytochrome c biogenesis factor N OS=Solanum tuberosum subsp. andigenum OX=80418 ... [more]
A0A5C1H7781.0e-2881.11Cytochrome C biogenesis factor N OS=Solanum tuberosum OX=4113 GN=ccmFN PE=3 SV=1[more]
BLAST of Cla97C09G177259 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07768.12.6e-2995.59Cytochrome C assembly protein [more]
ATMG00960.12.6e-2995.59Cytochrome C assembly protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003567Cytochrome c-type biogenesis proteinPRINTSPR01410CCBIOGENESIScoord: 41..57
score: 69.28
coord: 57..76
score: 47.22
IPR003567Cytochrome c-type biogenesis proteinPANTHERPTHR43653CYTOCHROME C ASSEMBLY PROTEIN-RELATEDcoord: 36..105
NoneNo IPR availablePANTHERPTHR43653:SF1CYTOCHROME C ASSEMBLY PROTEIN-RELATEDcoord: 36..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G177259.1Cla97C09G177259.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017004 cytochrome complex assembly
biological_process GO:0015886 heme transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
molecular_function GO:0020037 heme binding
molecular_function GO:0015232 heme transmembrane transporter activity