Cla97C09G176817 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G176817
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionCCHC-type domain-containing protein
LocationCla97Chr09: 25126644 .. 25127765 (+)
RNA-Seq ExpressionCla97C09G176817
SyntenyCla97C09G176817
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGAAAGATTTTCTCCACACTTGGAAGAAGTTATCTCTTTCAGAGGAGGAAAGAGAAGTAACAATAGGCATGGACTCAAATTTAGATTCTATGATTTTCGATCAACTTAGTCATTGTCTAGTAGGAATGCTCCTCACATCTCGCACGACTACCCCTGGAATCATCAAGAATGCATTTAACAATGCATGGAGAACTAATATGGGCCTCTCAGTTGAAAGCTTGGGAAAGAACTTATATCTCATCAAATTTGACTCTCGGCGGGATAAAGAAGCGATCTTATTTCTAGGACCAGGGTTTGATAAGTCTCTTTTGGCTTTGGAGATCCCGAAGACTAATGTCAAATTATCTCAGATGTCTTTTGAGAGAGTTTCCTTTTGGATTCAGTTTCTTGATATTCCGCTAGGTTTTCAGAATAGGTTCATGGCAAGAAAGTTGGGTAACACATTGGGAACCTTCATAGAAGTGGACTGTGATAAGGATAGCTTCTGTTGGGGAGAACACTTTAGAATTAAAGTGCTCATTGATATTACAAAGCCTCTTCAGAGAGGGATATTGATCGAACCAGGAGGTGATCAAGAAAGTGTCTGGATCTGTATCCAATATAAAAGGTTACCTGACTTTTGCTACTACTGCGGGAGAATTGGTCATGTGATGAAGGATTGCAGGGATTTGACTCTAGAGAAAGGGAAGGATGCTGAGAATTTTCAATTCGGAGGTTGGCTTCGGTTTCAAGGAAGTCAACCAAGAAAAAGGAGGCGAGCTTCTCCAATAGCAAATGAGAAGGAAGATTCAATTTCCAATTTCCCACCGTATCAGACAGAAGACCACTTGAATAGAGGAGGTGGCTCTCTTAATCCGGACCCACCTAAACAGCCAAGAAATATGGAAAAGCCGACTGATAATCTATGTTCATCTCTTCTACAAGGCCCCTTTGATTTGAATACTTGTTTGGTGAACCTTGGAAATGCGGATCCACTAGCAAAAGAAGACACACCCCTGGAGCTGCTGCCTTTTGAGTTAAGGGGACCTAACAAGCTAGTTGAACATGAGAGATCAGGTCCTTCTCCTAACCAACCAAATTCAAACAATTTAGTTAGTAAGAATGTGAGGAATTGA

mRNA sequence

ATGGAGTCGAAAGATTTTCTCCACACTTGGAAGAAGTTATCTCTTTCAGAGGAGGAAAGAGAAGTAACAATAGGCATGGACTCAAATTTAGATTCTATGATTTTCGATCAACTTAGTCATTGTCTAGTAGGAATGCTCCTCACATCTCGCACGACTACCCCTGGAATCATCAAGAATGCATTTAACAATGCATGGAGAACTAATATGGGCCTCTCAGTTGAAAGCTTGGGAAAGAACTTATATCTCATCAAATTTGACTCTCGGCGGGATAAAGAAGCGATCTTATTTCTAGGACCAGGGTTTGATAAGTCTCTTTTGGCTTTGGAGATCCCGAAGACTAATGTCAAATTATCTCAGATGTCTTTTGAGAGAGTTTCCTTTTGGATTCAGTTTCTTGATATTCCGCTAGGTTTTCAGAATAGGTTCATGGCAAGAAAGTTGGGTAACACATTGGGAACCTTCATAGAAGTGGACTGTGATAAGGATAGCTTCTGTTGGGGAGAACACTTTAGAATTAAAGTGCTCATTGATATTACAAAGCCTCTTCAGAGAGGGATATTGATCGAACCAGGAGGTGATCAAGAAAGTGTCTGGATCTGTATCCAATATAAAAGGTTACCTGACTTTTGCTACTACTGCGGGAGAATTGGTCATGTGATGAAGGATTGCAGGGATTTGACTCTAGAGAAAGGGAAGGATGCTGAGAATTTTCAATTCGGAGGTTGGCTTCGGTTTCAAGGAAGTCAACCAAGAAAAAGGAGGCGAGCTTCTCCAATAGCAAATGAGAAGGAAGATTCAATTTCCAATTTCCCACCGTATCAGACAGAAGACCACTTGAATAGAGGAGGTGGCTCTCTTAATCCGGACCCACCTAAACAGCCAAGAAATATGGAAAAGCCGACTGATAATCTATGTTCATCTCTTCTACAAGGCCCCTTTGATTTGAATACTTGTTTGGTGAACCTTGGAAATGCGGATCCACTAGCAAAAGAAGACACACCCCTGGAGCTGCTGCCTTTTGAGTTAAGGGGACCTAACAAGCTAGTTGAACATGAGAGATCAGGTCCTTCTCCTAACCAACCAAATTCAAACAATTTAGTTAGTAAGAATGTGAGGAATTGA

Coding sequence (CDS)

ATGGAGTCGAAAGATTTTCTCCACACTTGGAAGAAGTTATCTCTTTCAGAGGAGGAAAGAGAAGTAACAATAGGCATGGACTCAAATTTAGATTCTATGATTTTCGATCAACTTAGTCATTGTCTAGTAGGAATGCTCCTCACATCTCGCACGACTACCCCTGGAATCATCAAGAATGCATTTAACAATGCATGGAGAACTAATATGGGCCTCTCAGTTGAAAGCTTGGGAAAGAACTTATATCTCATCAAATTTGACTCTCGGCGGGATAAAGAAGCGATCTTATTTCTAGGACCAGGGTTTGATAAGTCTCTTTTGGCTTTGGAGATCCCGAAGACTAATGTCAAATTATCTCAGATGTCTTTTGAGAGAGTTTCCTTTTGGATTCAGTTTCTTGATATTCCGCTAGGTTTTCAGAATAGGTTCATGGCAAGAAAGTTGGGTAACACATTGGGAACCTTCATAGAAGTGGACTGTGATAAGGATAGCTTCTGTTGGGGAGAACACTTTAGAATTAAAGTGCTCATTGATATTACAAAGCCTCTTCAGAGAGGGATATTGATCGAACCAGGAGGTGATCAAGAAAGTGTCTGGATCTGTATCCAATATAAAAGGTTACCTGACTTTTGCTACTACTGCGGGAGAATTGGTCATGTGATGAAGGATTGCAGGGATTTGACTCTAGAGAAAGGGAAGGATGCTGAGAATTTTCAATTCGGAGGTTGGCTTCGGTTTCAAGGAAGTCAACCAAGAAAAAGGAGGCGAGCTTCTCCAATAGCAAATGAGAAGGAAGATTCAATTTCCAATTTCCCACCGTATCAGACAGAAGACCACTTGAATAGAGGAGGTGGCTCTCTTAATCCGGACCCACCTAAACAGCCAAGAAATATGGAAAAGCCGACTGATAATCTATGTTCATCTCTTCTACAAGGCCCCTTTGATTTGAATACTTGTTTGGTGAACCTTGGAAATGCGGATCCACTAGCAAAAGAAGACACACCCCTGGAGCTGCTGCCTTTTGAGTTAAGGGGACCTAACAAGCTAGTTGAACATGAGAGATCAGGTCCTTCTCCTAACCAACCAAATTCAAACAATTTAGTTAGTAAGAATGTGAGGAATTGA

Protein sequence

MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNAFNNAWRTNMGLSVESLGKNLYLIKFDSRRDKEAILFLGPGFDKSLLALEIPKTNVKLSQMSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDITKPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAENFQFGGWLRFQGSQPRKRRRASPIANEKEDSISNFPPYQTEDHLNRGGGSLNPDPPKQPRNMEKPTDNLCSSLLQGPFDLNTCLVNLGNADPLAKEDTPLELLPFELRGPNKLVEHERSGPSPNQPNSNNLVSKNVRN
Homology
BLAST of Cla97C09G176817 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 222.2 bits (565), Expect = 7.3e-54
Identity = 108/268 (40.30%), Postives = 159/268 (59.33%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           M+ ++ L  W+K  L+ EE E+ + +D +   M    L++ LVG LL  R  +  ++   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FNNAWRTNMGLSVESLGKNLYLIKFDSRRDKEAILFLGPG-FDKSLLALEIPKTNVKLSQ 120
              AW+    L+VES+GKNL+L  F    D   ++  GP  FDK+L+ L+ P ++  +S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDIT 180
           + F RV+FWI   D+P+ + N+ MA +LGN +G F++VDC++  F WG   RI+VLIDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAE-NFQ 240
           KPL+RGI I   G     WI IQY+RLPDFCY+CG IGH   DC    L    D+    +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 FGGWLRFQGSQPRKRRRASPIANEKEDS 267
           +G WLRF GS+   ++     +  +EDS
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDS 268

BLAST of Cla97C09G176817 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 199.5 bits (506), Expect = 5.0e-47
Identity = 93/249 (37.35%), Postives = 146/249 (58.63%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           M + + L  WK   L+ EE ++ + +DS+        L   L+  LL+ R+ +  ++KN 
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FNNAWRTN-MGLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLS 120
              AW+ +    SV+ +G N++L  F+   D+  IL +GP  FD++L+ ++ P +  K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 QMSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDI 180
            M F  VS W+ F D+ L   N+ MA +LGN +G F +V+ + ++FCWG   R++V  D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 TKPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAENFQ 240
            KPL RGI +   G     WI IQY+RLPDF Y+CGR+ H++KDC D  ++    ++N Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSKNLQ 240

Query: 241 FGGWLRFQG 248
           +G WLRFQG
Sbjct: 241 YGPWLRFQG 247

BLAST of Cla97C09G176817 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 5.8e-43
Identity = 94/250 (37.60%), Postives = 135/250 (54.00%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           M + D L  WK   L+ EE E  I +D++  +    +L   LVG L   R  T  ++KN 
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  FNNAWR-TNMGLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLS 120
              AW+  N    V+SLG NL+L  F    D+  I   GP  FD++L+ +  P   +  S
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 QMSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDI 180
           ++ F ++  W++F D+PLG   R MA +LGN LG F E DCD  +  WG + R++V++DI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 TKPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAENFQ 240
           +KPL+RGI +   G     WI IQY+RLPDFCY+CG                    +  Q
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRKKHQ 235

Query: 241 FGGWLRFQGS 249
           +G WLR+QG+
Sbjct: 241 YGSWLRYQGT 235

BLAST of Cla97C09G176817 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 175.6 bits (444), Expect = 7.8e-40
Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 0

Query: 11  KKLSL-SEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNAFNNAWRTNM 70
           + LSL SEE+  V IG +S   S++  +   CLVG LLT R      +KN   + W+   
Sbjct: 10  RTLSLTSEEDAVVRIGGEST--SLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTK 69

Query: 71  GLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLSQMSFERVSFW 130
           G+ V  +G NL++  F    DK  +L  GP  FDK LL L     NV+ S +   RV FW
Sbjct: 70  GMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFW 129

Query: 131 IQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDITKPLQRGILI 190
           +   ++PL   N+ +   +GN +G FI++D +     WG   RI+V +D+ KPL+RG+ +
Sbjct: 130 VHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKL 189

Query: 191 EPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRD-LTLEKGKDAENFQFGGWLRFQG 250
                 E +W+  +Y+RLP +CY+CGR+GH  ++C D L+   G   ++ Q+G WLR   
Sbjct: 190 AL-SSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAWLRMDN 249

Query: 251 SQPRKRRRASPI 260
            + +  RRA  I
Sbjct: 250 IKSKGSRRAGSI 258

BLAST of Cla97C09G176817 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 175.3 bits (443), Expect = 1.0e-39
Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 0

Query: 11  KKLSL-SEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNAFNNAWRTNM 70
           + LSL SEE+  V IG DS   S++  +   CLVG LLT R      +KN   + W+   
Sbjct: 10  RTLSLTSEEDAVVRIGGDST--SLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTK 69

Query: 71  GLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLSQMSFERVSFW 130
           G+ V  +G NL++  F    DK  +L  GP  FDK LL L     NV+ S +    V FW
Sbjct: 70  GMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLTGVQFW 129

Query: 131 IQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDITKPLQRGILI 190
           +   ++PL   N+ + + +GN +G FI++D +     WG   RI+V ID+ KPL+RG+ +
Sbjct: 130 VHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRKPLRRGMKL 189

Query: 191 EPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRD-LTLEKGKDAENFQFGGWLRFQG 250
                 + +W+  +Y+RLP +CY+CGR+GH  ++C D L+   G   ++ Q+G WLR   
Sbjct: 190 AL-SSADPIWVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQYGAWLRMDN 249

Query: 251 SQPRKRRRASPI 260
            + +  RRA  I
Sbjct: 250 IKSKGSRRAGSI 258

BLAST of Cla97C09G176817 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.5e-54
Identity = 108/268 (40.30%), Postives = 159/268 (59.33%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           M+ ++ L  W+K  L+ EE E+ + +D +   M    L++ LVG LL  R  +  ++   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FNNAWRTNMGLSVESLGKNLYLIKFDSRRDKEAILFLGPG-FDKSLLALEIPKTNVKLSQ 120
              AW+    L+VES+GKNL+L  F    D   ++  GP  FDK+L+ L+ P ++  +S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 MSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDIT 180
           + F RV+FWI   D+P+ + N+ MA +LGN +G F++VDC++  F WG   RI+VLIDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAE-NFQ 240
           KPL+RGI I   G     WI IQY+RLPDFCY+CG IGH   DC    L    D+    +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 FGGWLRFQGSQPRKRRRASPIANEKEDS 267
           +G WLRF GS+   ++     +  +EDS
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDS 268

BLAST of Cla97C09G176817 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.4e-47
Identity = 93/249 (37.35%), Postives = 146/249 (58.63%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           M + + L  WK   L+ EE ++ + +DS+        L   L+  LL+ R+ +  ++KN 
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FNNAWRTN-MGLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLS 120
              AW+ +    SV+ +G N++L  F+   D+  IL +GP  FD++L+ ++ P +  K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 QMSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDI 180
            M F  VS W+ F D+ L   N+ MA +LGN +G F +V+ + ++FCWG   R++V  D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 TKPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAENFQ 240
            KPL RGI +   G     WI IQY+RLPDF Y+CGR+ H++KDC D  ++    ++N Q
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSKNLQ 240

Query: 241 FGGWLRFQG 248
           +G WLRFQG
Sbjct: 241 YGPWLRFQG 247

BLAST of Cla97C09G176817 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-43
Identity = 94/250 (37.60%), Postives = 135/250 (54.00%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           M + D L  WK   L+ EE E  I +D++  +    +L   LVG L   R  T  ++KN 
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  FNNAWR-TNMGLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLS 120
              AW+  N    V+SLG NL+L  F    D+  I   GP  FD++L+ +  P   +  S
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 QMSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDI 180
           ++ F ++  W++F D+PLG   R MA +LGN LG F E DCD  +  WG + R++V++DI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 TKPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAENFQ 240
           +KPL+RGI +   G     WI IQY+RLPDFCY+CG                    +  Q
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRKKHQ 235

Query: 241 FGGWLRFQGS 249
           +G WLR+QG+
Sbjct: 241 YGSWLRYQGT 235

BLAST of Cla97C09G176817 vs. ExPASy TrEMBL
Match: A0A5C7GUN2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024379 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.2e-39
Identity = 88/246 (35.77%), Postives = 138/246 (56.10%), Query Frame = 0

Query: 1   MESKDFLHTWKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNA 60
           ME K+     + LSL++E+ E+   +   +++     + HCLVG +L+SR       K  
Sbjct: 1   MELKELAKLCENLSLTDEDSEIH-QVFGGIENEGVKDVHHCLVGKVLSSRRVNREAFKTI 60

Query: 61  FNNAWRTNMGLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLSQ 120
               W     + +E++GKN +L  F +  D+  I   GP  FD+ LLALE  +    +SQ
Sbjct: 61  IEQIWSPFGTVDIEAVGKNTFLFYFANPEDRNRIWRRGPWHFDRHLLALEKLEGTGNISQ 120

Query: 121 MSFERVSFWIQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDIT 180
           +SF +  FW+Q  DIP+   NR MA+ L   +G  IE+   K   CWG+  R+KVLIDI+
Sbjct: 121 LSFSKAEFWVQIHDIPIMCMNRCMAKWLAAQIGDIIEIP-SKSRECWGKFLRVKVLIDIS 180

Query: 181 KPLQRGILIEPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGK-DAENFQ 240
           +PL+R + ++       V + ++Y+RLP+FCY CGR+GH + DC D+  +K   +    +
Sbjct: 181 RPLKRWLRLKLDQSDNIVMVNLKYERLPEFCYACGRLGHSIGDCNDVEAKKAAVEGPITK 240

Query: 241 FGGWLR 245
           FG W+R
Sbjct: 241 FGSWMR 244

BLAST of Cla97C09G176817 vs. ExPASy TrEMBL
Match: A0A6P9EH14 (uncharacterized protein LOC108984200 OS=Juglans regia OX=51240 GN=LOC108984200 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.1e-39
Identity = 87/264 (32.95%), Postives = 143/264 (54.17%), Query Frame = 0

Query: 10  WKKLSLSEEEREVTIGMDSNLDSMIFDQLSHCLVGMLLTSRTTTPGIIKNAFNNAWRTNM 69
           +  LSL+E+E E  + +D N    +     +CL+  LLT +     + K      WRT  
Sbjct: 9   YASLSLTEKESEEVV-VDINHVEEVLSSGENCLIMQLLTRKHYNHEVFKQTMRKVWRTVK 68

Query: 70  GLSVESLGKNLYLIKFDSRRDKEAILFLGP-GFDKSLLALEIPKTNVKLSQMSFERVSFW 129
           G+ +  L  +  L +F+  +DK  +L  GP  FDK L+ L+     V+   ++   V FW
Sbjct: 69  GVKIRDLNSDFSLAEFEDVKDKVKVLREGPWAFDKQLVLLKEFDGLVQAKGLTIVHVPFW 128

Query: 130 IQFLDIPLGFQNRFMARKLGNTLGTFIEVDCDKDSFCWGEHFRIKVLIDITKPLQRGILI 189
           ++  D+PL  +N ++ + +G+ +G F+EVD  K  F WGE  R++VL+DI+ PLQR   +
Sbjct: 129 VRIYDLPLMARNSYVGKLIGSLIGEFLEVDLAKGEFEWGEFMRVRVLLDISTPLQRRKKL 188

Query: 190 EPGGDQESVWICIQYKRLPDFCYYCGRIGHVMKDCRDLTLEKGKDAENFQFGGWLRFQGS 249
           +  GD+   W+ + Y+RLPDFCY CG +GH +++C +  +    + +   +G WLR   S
Sbjct: 189 KL-GDENYCWVRLVYERLPDFCYQCGLLGHSLRECAEF-ISVNAEIDQLPYGAWLRAGFS 248

Query: 250 QPRKRRRASPIANEKEDSISNFPP 273
            P++  +    A  KE S +  PP
Sbjct: 249 SPKRGWQVGAGARSKEGSRNADPP 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.17.3e-5440.30uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.15.0e-4737.35uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.15.8e-4337.60uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028122006.17.8e-4036.51uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_028124075.11.0e-3936.51uncharacterized protein LOC114321128 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU553.5e-5440.30uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ12.4e-4737.35uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX302.8e-4337.60uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5C7GUN24.2e-3935.77CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02437... [more]
A0A6P9EH147.1e-3932.95uncharacterized protein LOC108984200 OS=Juglans regia OX=51240 GN=LOC108984200 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 209..225
e-value: 0.0032
score: 26.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 210..225
score: 10.147202
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 176..224
e-value: 3.7E-13
score: 48.9
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 37..174
e-value: 2.4E-20
score: 72.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..373
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 12..262
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 12..262
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 206..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G176817.1Cla97C09G176817.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding