Cla97C09G176540 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G176540
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 22731116 .. 22731610 (+)
RNA-Seq ExpressionCla97C09G176540
SyntenyCla97C09G176540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTTGGATATTTCTTCATTTTCTTATTACTCACACTATCCTATCATCTTTCTTCCCTTTTTCTTCTCTCTTTTTACTCCTCCTTTGGATGTATTCGATTCCATATATTAAAGAAAAGCAAGAACAAAAGCTTTTGTCTCCCTCTCTATCCTCCATTTCTCAGCCTCTGCTGCTACCTCAAAACCTCTTTCGTCTTTATCTTTCATTATTTTCTGATTTTTCTTCGTTTTTTCCATATGGGTTTTGTCTGCTGATACGAATTTTGGGTGTTGGAAGCTCCAGGTTGAGGTATTGGGTGTTTGATTCTACTCTCTGATACTTTGATTGTGGTTTTTTTATTTTTATTTTTTGTTTTGAGCTTTTTTGGTTTCATGGGTTGCTTTAATTTTTGAGTGTTTATTGCAGGAAGGAGATTTTGAACTGGAATAATTTGAACTTTGGAATTCAGAAGCTTAACAAGGGTTGTTCAGGAAAGTACCAAATCGATTGA

mRNA sequence

ATGGGTTTTTGGATATTTCTTCATTTTCTTATTACTCACACTATCCTATCATCTTTCTTCCCTTTTTCTTCTCTCTTTTTACTCCTCCTTTGGATGTATTCGATTCCATATATTAAAGAAAAGCAAGAACAAAAGCTTTTGTCTCCCTCTCTATCCTCCATTTCTCAGCCTCTGCTGCTACCTCAAAACCTCTTTCGTCTTTATCTTTCATTATTTTCTGATTTTTCTTCGTTTTTTCCATATGGGTTTTGTCTGCTGATACGAATTTTGGGTGTTGGAAGCTCCAGGTTGAGGAAGGAGATTTTGAACTGGAATAATTTGAACTTTGGAATTCAGAAGCTTAACAAGGGTTGTTCAGGAAAGTACCAAATCGATTGA

Coding sequence (CDS)

ATGGGTTTTTGGATATTTCTTCATTTTCTTATTACTCACACTATCCTATCATCTTTCTTCCCTTTTTCTTCTCTCTTTTTACTCCTCCTTTGGATGTATTCGATTCCATATATTAAAGAAAAGCAAGAACAAAAGCTTTTGTCTCCCTCTCTATCCTCCATTTCTCAGCCTCTGCTGCTACCTCAAAACCTCTTTCGTCTTTATCTTTCATTATTTTCTGATTTTTCTTCGTTTTTTCCATATGGGTTTTGTCTGCTGATACGAATTTTGGGTGTTGGAAGCTCCAGGTTGAGGAAGGAGATTTTGAACTGGAATAATTTGAACTTTGGAATTCAGAAGCTTAACAAGGGTTGTTCAGGAAAGTACCAAATCGATTGA

Protein sequence

MGFWIFLHFLITHTILSSFFPFSSLFLLLLWMYSIPYIKEKQEQKLLSPSLSSISQPLLLPQNLFRLYLSLFSDFSSFFPYGFCLLIRILGVGSSRLRKEILNWNNLNFGIQKLNKGCSGKYQID
Homology
[Close]
BLAST of Cla97C09G176540 vs. NCBI nr
Match: KGN47920.1 (hypothetical protein Csa_004333 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 5.1e-12
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 75  FSSF-FPYGFCLLIRILGVGSSRLRKEILNWNNLNFGIQKLNKGCSGKYQID 126
           FSSF FP GFCLLIR++GVGSSRLR+E    NNLNFGIQKL+K CSGKYQID
Sbjct: 30  FSSFPFPSGFCLLIRLVGVGSSRLRQEERRRNNLNFGIQKLDKSCSGKYQID 81

[Close]
BLAST of Cla97C09G176540 vs. ExPASy TrEMBL
Match: A0A0A0KDY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.5e-12
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 75  FSSF-FPYGFCLLIRILGVGSSRLRKEILNWNNLNFGIQKLNKGCSGKYQID 126
           FSSF FP GFCLLIR++GVGSSRLR+E    NNLNFGIQKL+K CSGKYQID
Sbjct: 30  FSSFPFPSGFCLLIRLVGVGSSRLRQEERRRNNLNFGIQKLDKSCSGKYQID 81

The following BLAST results are available for this feature:
BLAST of Cla97C09G176540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47920.15.1e-1278.85hypothetical protein Csa_004333 [Cucumis sativus][more]
BLAST of Cla97C09G176540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G176540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDY72.5e-1278.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1[more]
BLAST of Cla97C09G176540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G176540.1Cla97C09G176540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane