Cla97C09G174030 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C09G174030
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	RING-H2 finger protein ATL40-like
Location	Cla97Chr09: 10666319 .. 10666999 (-)
RNA-Seq Expression	Cla97C09G174030
Synteny	Cla97C09G174030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCTCCACTACTCCGTCCTTCGACGACGGCGCAGTCTTTTTCGGCCCCGATCGTCCTCACCGGAACCCATATGATTTAAACAACAAAATTATGCTCACCGCCATAATTTCCCTTTCTCTCGTCGTTCTTCTTGTCATTGCCCTTCACATTTACGCTCGTTACGCCCTCCGCCGCCACGCACGGCGGCAGGCCGTCCTCCGCCGCCTCGGAATCCTCGCCCTCGTCGACTCTGGCGACCCTCCTCCGCCGCCTTCCCGGTCCGGGCTCGACCCCTTGGTCATGGCGTCGCTGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAATCCAGGCCCTTCCGGCGCCGCCGTGGAGTGTGCCGTGTGCTTAAGCGCTATCGAGGACGGCGAGACGGCGAGAATATTGCCCAATTGTAAACACGTTTTCCATTTGGAGTGTATTGATAAATGGTTTGGGTCGCATTCCACGTGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATCGTGCCGGAACCTCGGGAGGCTCCGGCGGCAGCGGTGGCGGAGGGCAGCGGTGGGTCAAGCTCCCGATTGAGTTCGTTCAGAAGGATTCTAAGTAGAGAAAGGTCTTCGCGAAGGATTCAACCTTGCGTACGCCAAAGTAGAAACGACGACGTTCAAGACTTGGAAACCCAGTAA

mRNA sequence

ATGTCCTCCTCCACTACTCCGTCCTTCGACGACGGCGCAGTCTTTTTCGGCCCCGATCGTCCTCACCGGAACCCATATGATTTAAACAACAAAATTATGCTCACCGCCATAATTTCCCTTTCTCTCGTCGTTCTTCTTGTCATTGCCCTTCACATTTACGCTCGTTACGCCCTCCGCCGCCACGCACGGCGGCAGGCCGTCCTCCGCCGCCTCGGAATCCTCGCCCTCGTCGACTCTGGCGACCCTCCTCCGCCGCCTTCCCGGTCCGGGCTCGACCCCTTGGTCATGGCGTCGCTGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAATCCAGGCCCTTCCGGCGCCGCCGTGGAGTGTGCCGTGTGCTTAAGCGCTATCGAGGACGGCGAGACGGCGAGAATATTGCCCAATTGTAAACACGTTTTCCATTTGGAGTGTATTGATAAATGGTTTGGGTCGCATTCCACGTGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATCGTGCCGGAACCTCGGGAGGCTCCGGCGGCAGCGGTGGCGGAGGGCAGCGGTGGGTCAAGCTCCCGATTGAGTTCGTTCAGAAGGATTCTAAGTAGAGAAAGGTCTTCGCGAAGGATTCAACCTTGCGTACGCCAAAGTAGAAACGACGACGTTCAAGACTTGGAAACCCAGTAA

Coding sequence (CDS)

ATGTCCTCCTCCACTACTCCGTCCTTCGACGACGGCGCAGTCTTTTTCGGCCCCGATCGTCCTCACCGGAACCCATATGATTTAAACAACAAAATTATGCTCACCGCCATAATTTCCCTTTCTCTCGTCGTTCTTCTTGTCATTGCCCTTCACATTTACGCTCGTTACGCCCTCCGCCGCCACGCACGGCGGCAGGCCGTCCTCCGCCGCCTCGGAATCCTCGCCCTCGTCGACTCTGGCGACCCTCCTCCGCCGCCTTCCCGGTCCGGGCTCGACCCCTTGGTCATGGCGTCGCTGCCGGTCGTCGTTTTCAAGCACCAATCGGAAAATCCAGGCCCTTCCGGCGCCGCCGTGGAGTGTGCCGTGTGCTTAAGCGCTATCGAGGACGGCGAGACGGCGAGAATATTGCCCAATTGTAAACACGTTTTCCATTTGGAGTGTATTGATAAATGGTTTGGGTCGCATTCCACGTGTCCGATTTGTCGGACGGAGGCGGCGCCGATGATCGTGCCGGAACCTCGGGAGGCTCCGGCGGCAGCGGTGGCGGAGGGCAGCGGTGGGTCAAGCTCCCGATTGAGTTCGTTCAGAAGGATTCTAAGTAGAGAAAGGTCTTCGCGAAGGATTCAACCTTGCGTACGCCAAAGTAGAAACGACGACGTTCAAGACTTGGAAACCCAGTAA

Protein sequence

MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ

Homology

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BLAST of Cla97C09G174030 vs. NCBI nr
Match: XP_038877602.1 (RING-H2 finger protein ATL40-like [Benincasa hispida])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 211/228 (92.54%), Postives = 216/228 (94.74%), Query Frame = 0


Query: 1   MSSSTTPSFD--DGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYAL 60
           MSSS  PSFD  DG +FFGP  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYAL
Sbjct: 1   MSSSANPSFDDGDGYIFFGPAHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYAL 60

Query: 61  RRHARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAV 120
           RR ARRQAVLRRLGILALVDSGDPP PPSRSGLDPLVMAS+PV+VFKHQSENP PSGAAV
Sbjct: 61  RRQARRQAVLRRLGILALVDSGDPPLPPSRSGLDPLVMASMPVIVFKHQSENPDPSGAAV 120

Query: 121 ECAVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPA 180
           ECAVCLS IEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMI+PEPREAPA
Sbjct: 121 ECAVCLSGIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMILPEPREAPA 180

Query: 181 AAVAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           AAVAEG GGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLE+Q
Sbjct: 181 AAVAEGGGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLESQ 228

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BLAST of Cla97C09G174030 vs. NCBI nr
Match: XP_016900708.1 (PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo] >KAA0061641.1 RING-H2 finger protein ATL40-like [Cucumis melo var. makuwa] >TYK05865.1 RING-H2 finger protein ATL40-like [Cucumis melo var. makuwa])

HSP 1 Score: 389.0 bits (998), Expect = 2.7e-104
Identity = 198/226 (87.61%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSSS  PSFDDG ++FGP  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR
Sbjct: 1   MSSSANPSFDDGDIYFGPSHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILALVDS DP  PPSRSGLDPLVMAS+PVVVFKHQSENP PSG AVEC
Sbjct: 61  HARRQAVLRRLGILALVDSSDPHLPPSRSGLDPLVMASMPVVVFKHQSENPEPSGGAVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E  GGSSSRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGESGGGSSSRLSSFRRILSRERSSLRIQPCVFQHRNDAVPDLESQ 226

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BLAST of Cla97C09G174030 vs. NCBI nr
Match: XP_031744153.1 (RING-H2 finger protein ATL40 [Cucumis sativus] >KGN47956.1 hypothetical protein Csa_003069 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 3.1e-100
Identity = 191/229 (83.41%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAE---GSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E   G GGS+SRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

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BLAST of Cla97C09G174030 vs. NCBI nr
Match: XP_022930874.1 (RING-H2 finger protein ATL40-like [Cucurbita moschata])

HSP 1 Score: 339.7 bits (870), Expect = 1.9e-89
Identity = 182/220 (82.73%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 8   SFDDG-AVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQA 67
           SFD G + F+   RP+RNPY+LNN+IMLTAIISLSLVVLLVIALHIYARYALRRHARRQA
Sbjct: 5   SFDAGDSPFWVDHRPNRNPYNLNNRIMLTAIISLSLVVLLVIALHIYARYALRRHARRQA 64

Query: 68  VLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSA 127
           VLRRLGILALVDS D P PP  SGLDPLVMASLPVVVFKHQ ENP    AAVECAVCL A
Sbjct: 65  VLRRLGILALVDSSDLPRPPRHSGLDPLVMASLPVVVFKHQLENP----AAVECAVCLCA 124

Query: 128 IEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSG 187
           +EDGE AR+LPNCKH FHLECIDKWFG HSTCP CRTEAAPMI PEPREAP   VAE  G
Sbjct: 125 VEDGEEARVLPNCKHTFHLECIDKWFGLHSTCPNCRTEAAPMIRPEPREAP---VAESGG 184

Query: 188 GSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           GSSSRLSSFRRILSRERSSRRIQPCVR++ NDDVQDLE Q
Sbjct: 185 GSSSRLSSFRRILSRERSSRRIQPCVRENGNDDVQDLERQ 217

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BLAST of Cla97C09G174030 vs. NCBI nr
Match: KAG6589265.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022964.1 E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.4 bits (864), Expect = 9.4e-89
Identity = 181/220 (82.27%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 8   SFDDG-AVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQA 67
           SFD G + F+   RP+RNPY+LNN+IMLTAIISLSLVVLLVIALHIYARYALRRHARRQA
Sbjct: 5   SFDAGDSPFWVDHRPNRNPYNLNNRIMLTAIISLSLVVLLVIALHIYARYALRRHARRQA 64

Query: 68  VLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSA 127
           VLRRLGILALVDS D P PP  SGLDPLVMASLPVVVFKHQ EN     AAVECAVCL A
Sbjct: 65  VLRRLGILALVDSSDLPRPPRHSGLDPLVMASLPVVVFKHQLEN----AAAVECAVCLCA 124

Query: 128 IEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSG 187
           +EDGE AR+LPNCKH FHLECIDKWFG HSTCP CRTEAAPMI PEPREAP   VAE  G
Sbjct: 125 VEDGEEARVLPNCKHTFHLECIDKWFGLHSTCPNCRTEAAPMIRPEPREAP---VAESGG 184

Query: 188 GSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           GSSSRLSSFRRILSRERSSRRIQPCVR++ NDDVQDLE Q
Sbjct: 185 GSSSRLSSFRRILSRERSSRRIQPCVRENGNDDVQDLERQ 217

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BLAST of Cla97C09G174030 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-35
Identity = 99/226 (43.81%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 21  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSG 80
           P+ + YDLN+KIML A+ SLS V+L+V ALH+YAR+ LR   RR+   R L ++      
Sbjct: 20  PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR---RRREAFRGLPVI----FR 79

Query: 81  DPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCK 140
            P   P R GL+P V+ASLP           G + +A ECAVCLS +++ + AR LPNCK
Sbjct: 80  HPFEMPKR-GLNPTVIASLPTFTV---GATDGVAASATECAVCLSVLKEQDKARELPNCK 139

Query: 141 HVFHLECIDKWFGSHSTCPICRTEA--APMIVPEPREAPAA-------------AVAEGS 200
           H+FH++C+D W  + STCP+CRTE    P + PEPRE P                V   S
Sbjct: 140 HIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVEAAS 199

Query: 201 GGSS---------SRLSSFRRILSRERSSRRI-QPCVRQSRNDDVQ 222
             SS         SRL+SFR+IL+RERSS RI   C  Q R  D++
Sbjct: 200 SSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQDRVADLE 234

[Close]

BLAST of Cla97C09G174030 vs. ExPASy Swiss-Prot
Match: Q9SLC4 (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-33
Identity = 95/235 (40.43%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS+      D   F+     +   YD ++KI L   +S S+++++V   ++YA++ L R
Sbjct: 1   MSSNNKTDDSDDRSFW----QNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
            +  Q +           S      P + GLD LV+ASLP  V   +++  G      EC
Sbjct: 61  RSAFQDL-----------SFSVVSQPPKRGLDSLVIASLPTFVVGIKNDVAG-----TEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAA---PMIVPEPREAP 180
           AVCLS +E+ + AR+LPNCKHVFH+ C+D W  + STCP+CRTEA    P + PEPRE P
Sbjct: 121 AVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGP 180

Query: 181 A---------AAVAEGSGGSS-SRLSSFRRILSRERSS-RRIQPCVRQSRNDDVQ 222
                     A V   +GGSS SRL SFRRIL+RERSS RR    V Q R  D++
Sbjct: 181 VGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDHSRVDQDRELDIE 215

[Close]

BLAST of Cla97C09G174030 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-28
Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 18  PDRPHRN------PYDLNNKIMLTAIISLSLVVLLVIALHIYARY----ALRRHARRQAV 77
           P RP  N       Y ++ KIML+AI+ L  VV+L++ LH+YAR+    A RRH RR++ 
Sbjct: 10  PFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSR 69

Query: 78  LRRLGILALVDSGDPPPPP----SRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVC 137
            RR  ++    + DP        +  GLDP V+ SLPV  F  ++         +ECAVC
Sbjct: 70  NRRATMVFF--TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKD-----PIECAVC 129

Query: 138 LSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT 164
           LS  E+ ET R+LPNC+H FH++CID WF SHSTCP+CR+
Sbjct: 130 LSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]

BLAST of Cla97C09G174030 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 75/199 (37.69%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 9   FDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVL 68
           FD     +G      + Y LN KIML ++I L + V+L++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLG--ILALVDSGDPPPPPSR-SGLDPLVMASLPVVVFKHQS-ENPGPSGAAVECAVCL 128
           RR+   + +L  + DP    S  S LDP V+  +P+ V+  ++ E+P       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESP-----LEECSVCL 124

Query: 129 SAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT---EAAPMIVPEPREA----- 188
           S  E+ +  R+LP C HVFH++CID WF S S+CP+CR     A P+  PEP  A     
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 -PAAAVAEGSGGSSSRLSS 195
            P      GS  SS    S
Sbjct: 185 KPIEDTEAGSSSSSDESES 196

[Close]

BLAST of Cla97C09G174030 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.9e-25
Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 26  YDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSGDPPPP 85
           Y LN KIML+++I L + V++++  H YAR+  RRH RR     R  +  L  S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS------ 81

Query: 86  PSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHL 145
           P    LD  V+  +P  +F + S+NP P     EC+VCLS  E+ +  R+LP C H FH+
Sbjct: 82  PRDQALDQAVLDKIP--IFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGGSSSRLS 194
           +CID WF S STCP+CR          P + P   +  GS  SSS L+
Sbjct: 142 DCIDTWFRSRSTCPLCRA---------PVQPPFQVIETGSSSSSSPLT 172

[Close]

BLAST of Cla97C09G174030 vs. ExPASy TrEMBL
Match: A0A5A7V7D1 (RING-H2 finger protein ATL40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00200 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 198/226 (87.61%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSSS  PSFDDG ++FGP  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR
Sbjct: 1   MSSSANPSFDDGDIYFGPSHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILALVDS DP  PPSRSGLDPLVMAS+PVVVFKHQSENP PSG AVEC
Sbjct: 61  HARRQAVLRRLGILALVDSSDPHLPPSRSGLDPLVMASMPVVVFKHQSENPEPSGGAVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E  GGSSSRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGESGGGSSSRLSSFRRILSRERSSLRIQPCVFQHRNDAVPDLESQ 226

[Close]

BLAST of Cla97C09G174030 vs. ExPASy TrEMBL
Match: A0A1S4DXK5 (RING-H2 finger protein ATL40-like OS=Cucumis melo OX=3656 GN=LOC103491347 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 198/226 (87.61%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSSS  PSFDDG ++FGP  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR
Sbjct: 1   MSSSANPSFDDGDIYFGPSHPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILALVDS DP  PPSRSGLDPLVMAS+PVVVFKHQSENP PSG AVEC
Sbjct: 61  HARRQAVLRRLGILALVDSSDPHLPPSRSGLDPLVMASMPVVVFKHQSENPEPSGGAVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAEGSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E  GGSSSRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGESGGGSSSRLSSFRRILSRERSSLRIQPCVFQHRNDAVPDLESQ 226

[Close]

BLAST of Cla97C09G174030 vs. ExPASy TrEMBL
Match: A0A0A0KJL6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G420520 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 191/229 (83.41%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS T PSFD   ++FGP  PHRNPYDLNNKIMLTAI+SLSLVV+LVIALHIYARYALRR
Sbjct: 1   MSSPTNPSFDGDDIYFGPAHPHRNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
           HARRQAVLRRLGILA +DSGD  PPPSRSGLDPLVMAS+PVVVFKHQSE+P PSG  VEC
Sbjct: 61  HARRQAVLRRLGILAFIDSGDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAA 180
           AVCLSAI DGETARILPNCKHVFH+ECIDKWFGSHSTCPICRTEAAPM++PEPRE PAA 
Sbjct: 121 AVCLSAIVDGETARILPNCKHVFHVECIDKWFGSHSTCPICRTEAAPMMLPEPREGPAAE 180

Query: 181 VAE---GSGGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           V E   G GGS+SRLSSFRRILSRERSS RIQPCV Q RND V DLE+Q
Sbjct: 181 VGEGGGGGGGSTSRLSSFRRILSRERSSLRIQPCVLQHRNDAVPDLESQ 229

[Close]

BLAST of Cla97C09G174030 vs. ExPASy TrEMBL
Match: A0A6J1ESR2 (RING-H2 finger protein ATL40-like OS=Cucurbita moschata OX=3662 GN=LOC111437227 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 9.1e-90
Identity = 182/220 (82.73%), Postives = 191/220 (86.82%), Query Frame = 0


Query: 8   SFDDG-AVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQA 67
           SFD G + F+   RP+RNPY+LNN+IMLTAIISLSLVVLLVIALHIYARYALRRHARRQA
Sbjct: 5   SFDAGDSPFWVDHRPNRNPYNLNNRIMLTAIISLSLVVLLVIALHIYARYALRRHARRQA 64

Query: 68  VLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSA 127
           VLRRLGILALVDS D P PP  SGLDPLVMASLPVVVFKHQ ENP    AAVECAVCL A
Sbjct: 65  VLRRLGILALVDSSDLPRPPRHSGLDPLVMASLPVVVFKHQLENP----AAVECAVCLCA 124

Query: 128 IEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSG 187
           +EDGE AR+LPNCKH FHLECIDKWFG HSTCP CRTEAAPMI PEPREAP   VAE  G
Sbjct: 125 VEDGEEARVLPNCKHTFHLECIDKWFGLHSTCPNCRTEAAPMIRPEPREAP---VAESGG 184

Query: 188 GSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           GSSSRLSSFRRILSRERSSRRIQPCVR++ NDDVQDLE Q
Sbjct: 185 GSSSRLSSFRRILSRERSSRRIQPCVRENGNDDVQDLERQ 217

[Close]

BLAST of Cla97C09G174030 vs. ExPASy TrEMBL
Match: A0A6J1JP92 (E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita maxima OX=3661 GN=LOC111486268 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.0e-85
Identity = 178/221 (80.54%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 8   SFDDG-AVFFGPDRPHRN-PYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQ 67
           SFD G + F+   R +RN PY+LNN+IML+AIISLSLVVLLVIALHIYARYALRRHARRQ
Sbjct: 5   SFDAGDSPFWVDHRSNRNHPYNLNNRIMLSAIISLSLVVLLVIALHIYARYALRRHARRQ 64

Query: 68  AVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLS 127
           AVLRR GILALV S D PPPP  SGLDPLVMASLPVVVFKHQ ENP    AAVECAVCL 
Sbjct: 65  AVLRRRGILALVVSSDLPPPPRHSGLDPLVMASLPVVVFKHQLENP----AAVECAVCLC 124

Query: 128 AIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGS 187
           A+E+GE AR+LPNCKH FHLECIDKWFG HSTCPICRTEAAPMI PEPREAP   VAE  
Sbjct: 125 AVENGEEARVLPNCKHTFHLECIDKWFGLHSTCPICRTEAAPMIRPEPREAP---VAESG 184

Query: 188 GGSSSRLSSFRRILSRERSSRRIQPCVRQSRNDDVQDLETQ 227
           GGSSSRLSSF RILSRERSSRRIQPCVR++ NDDVQDLE Q
Sbjct: 185 GGSSSRLSSFGRILSRERSSRRIQPCVRENGNDDVQDLERQ 218

[Close]

BLAST of Cla97C09G174030 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 99/226 (43.81%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 21  PHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSG 80
           P+ + YDLN+KIML A+ SLS V+L+V ALH+YAR+ LR   RR+   R L ++      
Sbjct: 20  PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR---RRREAFRGLPVI----FR 79

Query: 81  DPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCK 140
            P   P R GL+P V+ASLP           G + +A ECAVCLS +++ + AR LPNCK
Sbjct: 80  HPFEMPKR-GLNPTVIASLPTFTV---GATDGVAASATECAVCLSVLKEQDKARELPNCK 139

Query: 141 HVFHLECIDKWFGSHSTCPICRTEA--APMIVPEPREAPAA-------------AVAEGS 200
           H+FH++C+D W  + STCP+CRTE    P + PEPRE P                V   S
Sbjct: 140 HIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVEAAS 199

Query: 201 GGSS---------SRLSSFRRILSRERSSRRI-QPCVRQSRNDDVQ 222
             SS         SRL+SFR+IL+RERSS RI   C  Q R  D++
Sbjct: 200 SSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQDRVADLE 234

[Close]

BLAST of Cla97C09G174030 vs. TAIR 10
Match: AT2G42350.1 (RING/U-box superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-34
Identity = 95/235 (40.43%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 1   MSSSTTPSFDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRR 60
           MSS+      D   F+     +   YD ++KI L   +S S+++++V   ++YA++ L R
Sbjct: 1   MSSNNKTDDSDDRSFW----QNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHR 60

Query: 61  HARRQAVLRRLGILALVDSGDPPPPPSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVEC 120
            +  Q +           S      P + GLD LV+ASLP  V   +++  G      EC
Sbjct: 61  RSAFQDL-----------SFSVVSQPPKRGLDSLVIASLPTFVVGIKNDVAG-----TEC 120

Query: 121 AVCLSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRTEAA---PMIVPEPREAP 180
           AVCLS +E+ + AR+LPNCKHVFH+ C+D W  + STCP+CRTEA    P + PEPRE P
Sbjct: 121 AVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGP 180

Query: 181 A---------AAVAEGSGGSS-SRLSSFRRILSRERSS-RRIQPCVRQSRNDDVQ 222
                     A V   +GGSS SRL SFRRIL+RERSS RR    V Q R  D++
Sbjct: 181 VGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDHSRVDQDRELDIE 215

[Close]

BLAST of Cla97C09G174030 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 18  PDRPHRN------PYDLNNKIMLTAIISLSLVVLLVIALHIYARY----ALRRHARRQAV 77
           P RP  N       Y ++ KIML+AI+ L  VV+L++ LH+YAR+    A RRH RR++ 
Sbjct: 10  PFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSR 69

Query: 78  LRRLGILALVDSGDPPPPP----SRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVC 137
            RR  ++    + DP        +  GLDP V+ SLPV  F  ++         +ECAVC
Sbjct: 70  NRRATMVFF--TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKD-----PIECAVC 129

Query: 138 LSAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT 164
           LS  E+ ET R+LPNC+H FH++CID WF SHSTCP+CR+
Sbjct: 130 LSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162

[Close]

BLAST of Cla97C09G174030 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 116.3 bits (290), Expect = 3.2e-26
Identity = 75/199 (37.69%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 9   FDDGAVFFGPDRPHRNPYDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVL 68
           FD     +G      + Y LN KIML ++I L + V+L++  H YAR+  RR  RR  + 
Sbjct: 5   FDSSKTLWGNMNHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRR--IR 64

Query: 69  RRLG--ILALVDSGDPPPPPSR-SGLDPLVMASLPVVVFKHQS-ENPGPSGAAVECAVCL 128
           RR+   + +L  + DP    S  S LDP V+  +P+ V+  ++ E+P       EC+VCL
Sbjct: 65  RRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESP-----LEECSVCL 124

Query: 129 SAIEDGETARILPNCKHVFHLECIDKWFGSHSTCPICRT---EAAPMIVPEPREA----- 188
           S  E+ +  R+LP C HVFH++CID WF S S+CP+CR     A P+  PEP  A     
Sbjct: 125 SEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSV 184

Query: 189 -PAAAVAEGSGGSSSRLSS 195
            P      GS  SS    S
Sbjct: 185 KPIEDTEAGSSSSSDESES 196

[Close]

BLAST of Cla97C09G174030 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.1e-26
Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 26  YDLNNKIMLTAIISLSLVVLLVIALHIYARYALRRHARRQAVLRRLGILALVDSGDPPPP 85
           Y LN KIML+++I L + V++++  H YAR+  RRH RR     R  +  L  S      
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS------ 81

Query: 86  PSRSGLDPLVMASLPVVVFKHQSENPGPSGAAVECAVCLSAIEDGETARILPNCKHVFHL 145
           P    LD  V+  +P  +F + S+NP P     EC+VCLS  E+ +  R+LP C H FH+
Sbjct: 82  PRDQALDQAVLDKIP--IFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHV 141

Query: 146 ECIDKWFGSHSTCPICRTEAAPMIVPEPREAPAAAVAEGSGGSSSRLS 194
           +CID WF S STCP+CR          P + P   +  GS  SSS L+
Sbjct: 142 DCIDTWFRSRSTCPLCRA---------PVQPPFQVIETGSSSSSSPLT 172

The following BLAST results are available for this feature:

BLAST of Cla97C09G174030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877602.1	2.3e-111	92.54	RING-H2 finger protein ATL40-like [Benincasa hispida]	[more]
XP_016900708.1	2.7e-104	87.61	PREDICTED: RING-H2 finger protein ATL40-like [Cucumis melo] >KAA0061641.1 RING-H...	[more]
XP_031744153.1	3.1e-100	83.41	RING-H2 finger protein ATL40 [Cucumis sativus] >KGN47956.1 hypothetical protein ...	[more]
XP_022930874.1	1.9e-89	82.73	RING-H2 finger protein ATL40-like [Cucurbita moschata]	[more]
KAG6589265.1	9.4e-89	82.27	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cla97C09G174030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLC3	2.8e-35	43.81	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]
Q9SLC4	2.0e-33	40.43	RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1	[more]
Q8L9T5	3.3e-28	44.38	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LZJ6	4.5e-25	37.69	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
O22255	9.9e-25	39.29	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]

BLAST of Cla97C09G174030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7D1	1.3e-104	87.61	RING-H2 finger protein ATL40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DXK5	1.3e-104	87.61	RING-H2 finger protein ATL40-like OS=Cucumis melo OX=3656 GN=LOC103491347 PE=4 S...	[more]
A0A0A0KJL6	1.5e-100	83.41	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G420520 P...	[more]
A0A6J1ESR2	9.1e-90	82.73	RING-H2 finger protein ATL40-like OS=Cucurbita moschata OX=3662 GN=LOC111437227 ...	[more]
A0A6J1JP92	1.0e-85	80.54	E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita maxima OX=3661 GN=LOC1114862...	[more]

BLAST of Cla97C09G174030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42360.1	2.0e-36	43.81	RING/U-box superfamily protein	[more]
AT2G42350.1	1.4e-34	40.43	RING/U-box superfamily protein	[more]
AT3G16720.1	2.3e-29	44.38	TOXICOS EN LEVADURA 2	[more]
AT3G62690.1	3.2e-26	37.69	AtL5	[more]
AT2G47560.1	7.1e-26	39.29	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 120..161 e-value: 8.4E-8 score: 41.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 119..162 e-value: 1.8E-14 score: 53.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 120..162 score: 12.946621
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 95..168 e-value: 3.2E-21 score: 76.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..226
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 20..225
None	No IPR available	PANTHER	PTHR14155:SF558	RING-H2 FINGER PROTEIN ATL40-LIKE	coord: 20..225
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 119..162 e-value: 4.18698E-18 score: 72.7279
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 105..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G174030.1	Cla97C09G174030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane