Cla97C09G173470 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G173470
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionU6 snRNA phosphodiesterase
LocationCla97Chr09: 10065052 .. 10070349 (-)
RNA-Seq ExpressionCla97C09G173470
SyntenyCla97C09G173470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAACCCGTCGTTGCTGCCATTGACAGAGCAGAGAATGGATGCTCTAAGGGCTTCGTATGGCGGAAGCTCGTCGGATGAAGAAGCAGATACAGTTTCCCTTTCATCAGCATCATCATCAACTTTAGCTTTAACTTCAACTTCAACGCCACAACTCTCCGATGAGACTGTGAGCTTTTCACCTCTGCCTCCGCCACCTCTCTCACTTCTCCATTTTCCAACTTCCACCTGTAACGCTCTTCTTCCTCCTTACATTTGCATTCTTTATCTTTTACTTTGTAGCGTTTCTCATAAACTCTTTCACTACTTCTTGTTTAGCTATTTTGGATGATTTACCAATCGATCAGGCAACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAACTATGCCTTACACCTCTATATCCCAGGTCATTCCCATATATCCTTTTTCAATTGCATTCTTGATTTATGAGTTACCCTGGTATGTCAAAGCTATGTAGTTCATCTAATTTGATTCTTAATCCTACTTTTCCTATTTCCATTTTGATTCACCTAATGGGGCTTCTTTGTTTTGTTATATATTTGGAAATACTTGTTAGTTGTAACAACTGTGATTCTGTTTATAGAGAGCTCTTCTTTGGTTGACCACTAATTCATTATTAACAAATAAGTAGATTATTAGAGTCCAGATTGGAATCAATGTCTAAAAATAATTAATCATAATTCATAAACCTTGTTTTGTTTGGCTACTCGTACAACGTTGTCTTCTTGAAATATATGTTGATTTCATTTTGGTTTGTGTCTCTCAACCCCTTAGCCTGCTATTTTGCCTCTTAAACATGATTATTAATACTTATCACTTGCTTGCATTTCATTACATCTATAATTTTGCCTTTTATTGTGCTTATGGAATTCTAGATTATCATGACGGAACCAACGAAGAAAATCAATAATATCTATGATAATGTTTCAACAACACCTACAAATGTCAGAACATGGCTACTTTTATATTGTTGGGTTTTTGACTCTTGAATTGGAACTTTCTCTAAGCTTCTTTCGTCAATTCACTATATTTCATGGTCAATGCATCTACAATCTTCTAAATGTTCATACTTGATGAGGAAAAGCAGTCAAAGTAGATATGACTTATTTAAAAGAAATATAATTTTTTTTTTGGTATATAAGTTTGTAGATTTCTCTATTAATTTATAATCAAAACATTAACAGAGATTCTGAACATCTACAAATTAAACATTCTCAAATACATGGTTCTAAATAGTTGTTGAGATTTTTTCATTTTATCTATGTAATACGACTTTTCACATTGTTTTTTCATTTTGAACATCTATAAATATTTGTTTCATGTTCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTTCCTGCTCTTCATCTTGTTGATATTGACATTCCTTTGGACTTTTTATGTAACGATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAAATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAACGACGGTAAGTTAAGACTCTCCATTTAGTTTCATTAGTAATTTCCAACTTGCTTTTGTTTTTTACTTGATTTTTTTTTTTTTTGAACAGTTATTGGATTGATTTTAGTAAATGGGAGACTTTTATTAATGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGGTGCGTCACATTTGAGGGATTTCCGTTTCCCTTATCTTTGCATTTTTGACGTAAATGTGCTTTTCTTCATTCTCAATTTTTGGGCCAATAATATGGGAGCTTCCACTCCTGCTAAAGTTTCTTTTTCAGCTTATATTTGTTTCTATTACATTACATAGTACGACTAGTTCAAAAACTCACGGAATCAGGTTAGATTATAGTTAACCCTTTACCTCACTTGTGGGTTTGATTTATGCATCTAATGCATCGATCAAAAGTTTTGAATTAGATTACTAGATGATAATTTTTATGTAGAATCTTGTAGGATGAGGCAATTTTTCTCTTGAATTTGATGAGTTTGGCCGAAATTAGATTACAAATCCATACACATGTATGCATGTATGTGCATGGATGTGTTTTGCATTCATATTATATTGGAAAATTAGGATTAAGTTGCCTACACATCATGCGACAATAATTTGTTGAACACATTTGGTATCGTTGTTCTCTCTGACACTCTCTCGTGTGATGTTTTGAAATTACAAGTTGTTTATAATTGTAACTCAAGAACAAACTTGTTTGCTAGGCCATCGTTGTTTGAGACCTTTTGACATACGTTATGATGATTTCATAAGTTTTACCTGGTTGAGATTGGCAATATTACATGGATGAAAGAGTTGTGCCTTTGTTTTCAATTGGTTGCAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGTTTGTTGCATTAACTATTTTTTTTGCCTTCATCTAATTTAGCATAATATGGAAGAAGATGACCTTCTAGACTCTATTTTTTGTAGGAAGCAAGACCACATATATCTTTTGCATGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAAATGAAGAAGTCTGCAATTAAGGAAACATTGAAGAGATGTATTTTCACCACCAAATTCAACGGCATCGAATGTAAGATTGGTAAAAAAATGTATAAAATATGTAAATTTCCCGATGAATAAAAAGATCATTGTGAATTTGTATACGTGTCCTATTGTTTTCTTATGTGCCCCTGAAATTCTTTCTTAATTATTTCGGCTTTACTAACAAAATTCCTTAGTTTCAGGTTTATGAAAAATTGCACTTTTCATTCTTTAATTTAACGATCTTTATTTGTGAAGCTTCATTTCTAAGATTATGAGGTTGTACTTCGTTGATAGATAAAATTTGACAGGAAGCTATAGAATATGGATGGATTCTACTTGTAAGGGGCATCCCAGTCCATTATAGTCAAAAGTGTAGAGAAATTCATCAAATGACGTAAAAGGGGTATTTGGCTCATTGATTTCATAAGTTGACGTTAAATAACTCAACTTTACCAATTTCAACGGTGTTCACTATTGGCCCATCGATTTCATAAGTTGACGTTAAATAACTCAACTTTACCAACTTCAACGGTGTTCACTATTGGCCCATTGATTCCATAAGTTGATGTTAAATAACTCAACTTTACCAACTTCAACAGTGTTCACTATTGGAGTTTGCACATTTATTTATGAACTTCATCTTCTCTTCTTTCTCTTTTTCTCTCTAATGTTTTCTAACTCCAAACTAAATAACAATACACCCAAAACATAAACTTCCTAACTCTAACATATTAACTTTAGACTTTAGAACTCAACTCAACGTTTCAAACAACTCCAAAGAGTTTTGGAATCATGTTGGGAAATGGAAAGAACACGGGGAAAGGTGAGCAACTAATTTTCTTACCAAGGCGTGAACGACTTTATCTCTTGCCTTGGCACAATACCAATCAATGTGCATTGGTGGCACATACAAATGCACATAAATTAACTAGAAAAATATTTGGGTGCATTTCGAGCTGCATCTATCATTATGCAGTTCACCCAAGTACTTAATCACAATGTGACAAACTTTTCTTTTTTTCAAAAAGATATTTTTTAAATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTCCTTTGTAAGCATGGGAGGCATGAAGGCTACATCCTAAGGGACCCTTGGTTCTTATCCCACCATTTTTTCACAAGTCTTCCTTATGCAAGTGAATGAGATACATTTTGCTAATGCTTCTTTTAGGTTTAATCATATGATTATTTAAAATACCTTGAAAATACTCAACACCACTTCTTATGTTTGGGAGGAACAAAGAATGTTATCTACCCATGAGTTCTAGTTCTTTAGGAGTAGGGCACATGGTGATATCATGTAATCTTGGATGATAATACGAATGAGTTAGAGATATTTTAGTATTTTTGGCATAACTAGCTACACGTTTGAGCTCTTTTCTTTTGATGTTATCGACTTGATATATGAAGTTCATTTCCTCTCTTAGGTCAAAGGAGTTTCAATCTTCTTGATTCCTCTTGATTTTCTTTCCCCATTTCCATTTCCTTTGTTTTGTTTTTGCCACTTTGGGACTAATCTTGGCCATCTTGGAGCTTAATGATGATCATTAGTGGCTAAGGTAAGTACTTTAGCTTAGAATTAGGAAGAAACCCAACTCTATTTAAGGCCTTGTTTATTTTCGTGTAAAACTTAATTAATCAATGGTAATCTGAAAAGTGGCCCCATTTGATTATGTTTGTTGTTGTTTACTAATGTTTTGTAATCGTAATGAAATGTGAACCCCACTATGCTATTCGTAATTGACAAATGCAATCCGATCGTGGAAGAGAGGGTGATTAATCCGATTGCGTTTGAAAATGACGTGGAACCCACTAATGTTTTTTAAATACTTTTGAAGTATTTTTTTTAGATTTTACTCTCACAAATCATCCATTATTGTTCGAATCGCTTTTGGTTATCGGTAATGAGGCTCCAGTGAAAGTCATTTTATCGTTCTCAGTTACATGGTTATCAATCTTATTAGTCCATTAAGTTGATAACCGTATCGAGCAAGATGATAAAAAACGATGTCATCTACAACTCGTAGGTGAGTGTGGGTATTGGAATGGGCATGGGCAACACTATTTTTGGAGCAATGATGGCCATGCCCAACTAGAAATATTGATTTATCATGTTCCCAGTGTTTGTGCCTGCTCTCCATCTTGTTGATATCAACATTCCTTTTGGACTTTTTATGCAAAGATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATCCAACTACATCAGATTGACTCAATAATGACAATGTTTTCCCAGAAGCTTCAGTCTCAAAGGCAGTAAGTTAAAAATTCTCCATTCGGTTCGATTGGTAATTTCCAACTTGCTTTTGTATTTTACTTGTGTTTTTTTTCTTTTCTTTGAACAGTTATTGGATTGATTTTAGCAAGGGGGAGACTTTTACTAACGATGATCTCTCTCAAACCTTTTTGCAAATGGAAATTACTGCTGGAGGGCTAATGGAGGTGCGTCACATTTGA

mRNA sequence

AAAAAAAAAACCCGTCGTTGCTGCCATTGACAGAGCAGAGAATGGATGCTCTAAGGGCTTCGTATGGCGGAAGCTCGTCGGATGAAGAAGCAGATACAGTTTCCCTTTCATCAGCATCATCATCAACTTTAGCTTTAACTTCAACTTCAACGCCACAACTCTCCGATGAGACTGTGAGCTTTTCACCTCTGCCTCCGCCACCTCTCTCACTTCTCCATTTTCCAACTTCCACCTCTATTTTGGATGATTTACCAATCGATCAGGCAACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAACTATGCCTTACACCTCTATATCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTTCCTGCTCTTCATCTTGTTGATATTGACATTCCTTTGGACTTTTTATGTAACGATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAAATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAACGACGTTATTGGATTGATTTTAGTAAATGGGAGACTTTTATTAATGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATCTTTTGCATGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAAATGAAGAAGTCTGCAATTAAGGAAACATTGAAGAGATGTATTTTCACCACCAAATTCAACGGCATCGAATATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATCCAACTACATCAGATTGACTCAATAATGACAATGTTTTCCCAGAAGCTTCAGTCTCAAAGGCATTATTGGATTGATTTTAGCAAGGGGGAGACTTTTACTAACGATGATCTCTCTCAAACCTTTTTGCAAATGGAAATTACTGCTGGAGGGCTAATGGAGGTGCGTCACATTTGA

Coding sequence (CDS)

ATGGATGCTCTAAGGGCTTCGTATGGCGGAAGCTCGTCGGATGAAGAAGCAGATACAGTTTCCCTTTCATCAGCATCATCATCAACTTTAGCTTTAACTTCAACTTCAACGCCACAACTCTCCGATGAGACTGTGAGCTTTTCACCTCTGCCTCCGCCACCTCTCTCACTTCTCCATTTTCCAACTTCCACCTCTATTTTGGATGATTTACCAATCGATCAGGCAACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAACTATGCCTTACACCTCTATATCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTTCCTGCTCTTCATCTTGTTGATATTGACATTCCTTTGGACTTTTTATGTAACGATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAAATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAACGACGTTATTGGATTGATTTTAGTAAATGGGAGACTTTTATTAATGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATCTTTTGCATGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAAATGAAGAAGTCTGCAATTAAGGAAACATTGAAGAGATGTATTTTCACCACCAAATTCAACGGCATCGAATATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATCCAACTACATCAGATTGACTCAATAATGACAATGTTTTCCCAGAAGCTTCAGTCTCAAAGGCATTATTGGATTGATTTTAGCAAGGGGGAGACTTTTACTAACGATGATCTCTCTCAAACCTTTTTGCAAATGGAAATTACTGCTGGAGGGCTAATGGAGGTGCGTCACATTTGA

Protein sequence

MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHFPTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIEYDHKLEQALAREFHISLSRTVPIQLHQIDSIMTMFSQKLQSQRHYWIDFSKGETFTNDDLSQTFLQMEITAGGLMEVRHI
Homology
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BLAST of Cla97C09G173470 vs. NCBI nr
Match: XP_038875355.1 (U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida])

HSP 1 Score: 494.6 bits (1272), Expect = 7.3e-136
Identity = 255/281 (90.75%), Postives = 261/281 (92.88%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDALRASYGGSSSDEEADTVS SSAS      TS STPQLSDETVSF PLPPP  SLLHF
Sbjct: 1   MDALRASYGGSSSDEEADTVSPSSAS------TSASTPQLSDETVSFLPLPPPSPSLLHF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P STSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTN RKEVALFLKKVSSLVPAL
Sbjct: 61  PNSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDID+PLD LC DDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW
Sbjct: 121 HLVDIDVPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEII GGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWA+GDLSKLLSQAVHNEMK SA+ +TLKRCIFTTKF GIE
Sbjct: 241 AWAIGDLSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIE 275

[Close]
BLAST of Cla97C09G173470 vs. NCBI nr
Match: XP_038875354.1 (U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida])

HSP 1 Score: 494.6 bits (1272), Expect = 7.3e-136
Identity = 255/281 (90.75%), Postives = 261/281 (92.88%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDALRASYGGSSSDEEADTVS SSAS      TS STPQLSDETVSF PLPPP  SLLHF
Sbjct: 1   MDALRASYGGSSSDEEADTVSPSSAS------TSASTPQLSDETVSFLPLPPPSPSLLHF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P STSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTN RKEVALFLKKVSSLVPAL
Sbjct: 61  PNSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDID+PLD LC DDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW
Sbjct: 121 HLVDIDVPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEII GGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWA+GDLSKLLSQAVHNEMK SA+ +TLKRCIFTTKF GIE
Sbjct: 241 AWAIGDLSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIE 275

[Close]
BLAST of Cla97C09G173470 vs. NCBI nr
Match: XP_008467330.1 (PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo])

HSP 1 Score: 479.6 bits (1233), Expect = 2.4e-131
Identity = 244/281 (86.83%), Postives = 257/281 (91.46%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDALRASYGGSSSDEE DTVS SSA        STSTPQ  DETVS  PLPPPPLSLL+F
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPSSA--------STSTPQFFDETVSSLPLPPPPLSLLNF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P ST +LDDLPIDQATRVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPAL
Sbjct: 61  PNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYW
Sbjct: 121 HLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGD+S++ SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Sbjct: 241 AWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]
BLAST of Cla97C09G173470 vs. NCBI nr
Match: XP_022969741.1 (U6 snRNA phosphodiesterase [Cucurbita maxima])

HSP 1 Score: 476.9 bits (1226), Expect = 1.6e-130
Identity = 245/281 (87.19%), Postives = 257/281 (91.46%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           M+AL ASYGGSSSDE+ADTVS SSAS+S  A  S S PQLSDET SF PLPPPPLSLL F
Sbjct: 1   MEALMASYGGSSSDEDADTVSPSSASASASASASASLPQLSDETESFLPLPPPPLSLLDF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P STS LDDLPI QA RVRSFPHVQGNYA+HLYIPVY+PTNARKEVALFLKK+S LVPAL
Sbjct: 61  PNSTSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW
Sbjct: 121 HLVDIDIPLDILCKDDLKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEIIAGGLMEIRK+IQ+VNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKRIQVVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGDLSKLLSQ+VH+EMKKS +KE  KRCIFT KFNGIE
Sbjct: 241 AWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIE 281

[Close]
BLAST of Cla97C09G173470 vs. NCBI nr
Match: XP_004143673.1 (U6 snRNA phosphodiesterase [Cucumis sativus] >KGN50332.1 hypothetical protein Csa_000253 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 3.0e-129
Identity = 241/281 (85.77%), Postives = 254/281 (90.39%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDALRASYGGSSSDEE DTVS  SA        STS PQ  DETV+F PLPPPPLSLL+F
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPPSA--------STSAPQFLDETVTFLPLPPPPLSLLNF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P ST +LDDLPIDQATRVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPAL
Sbjct: 61  PNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYW
Sbjct: 121 HLVDIDIPLDVLCKDDQKLEQAWAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISV 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGD+S+L SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Sbjct: 241 AWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]
BLAST of Cla97C09G173470 vs. ExPASy Swiss-Prot
Match: Q91W78 (U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.5e-18
Identity = 69/254 (27.17%), Postives = 120/254 (47.24%), Query Frame = 0 

Query: 8   YGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHFPTSTSIL 67
           Y  S S++EA+ V+   +   T        P  S++      LP P   L  FP++    
Sbjct: 9   YSSSGSEDEAEAVAAGRSKPGTGFHRCGQNPVPSEK------LPVPDSVLSMFPSTEEGP 68

Query: 68  DDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHLVDIDI 127
           +D       R+R+FPH +GN+A H+YIP     + R  +   L +    VP L L++   
Sbjct: 69  EDDSAKHGGRIRTFPHERGNWATHIYIPYEAKEDFRDLLDALLPRAQMFVPRLVLME--- 128

Query: 128 PLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWE 187
                             EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ +
Sbjct: 129 ------------------EFHVSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVK 188

Query: 188 TFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDL 247
            + N + +RTF+ +E ++ G  +    +  V+   K  +L  FY++   HIS AW +GD 
Sbjct: 189 IYTNQEKTRTFIGLE-VSSGHAQFLDLVSEVDRAMKEFDLTTFYQDPSFHISLAWCVGDA 234

Query: 248 SKLLSQAVHNEMKK 262
           S  L      E+++
Sbjct: 249 SLQLEGQCLQELQE 234

[Close]
BLAST of Cla97C09G173470 vs. ExPASy Swiss-Prot
Match: Q6DEF6 (U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.2e-17
Identity = 84/263 (31.94%), Postives = 129/263 (49.05%), Query Frame = 0 

Query: 7   SYGGSSSDEEADTVSLSSASSSTL------ALTSTSTPQLSDETVSFSPLPPPPLSLLH- 66
           +Y  SSS+EE+ + S  S     L      AL   S  +   ++   +P  P P S+   
Sbjct: 4   NYSSSSSEEESGSSSSPSGKRQKLDTETSEALDHGSAQRKVCKSSHLTPRLPLPESVKEM 63

Query: 67  FPTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPA 126
           F  S  +  D   +   R+RSF H +GN+A +++ P Y P  A  EV   L K+ +   A
Sbjct: 64  FRDSEELWTDKSEEHGGRLRSFQHERGNWATYVFFP-YDPEEAFLEV---LNKMMAAAEA 123

Query: 127 LHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRY 186
                 DIPL             ++ EFH+SLS+TV +R H I   V  +R  L   +++
Sbjct: 124 -----HDIPL------------TVSEEFHLSLSKTVVLRHHWIQPFVQSIRTSLTHFQKF 183

Query: 187 WIDFSKWETFINDDLSRTFLSMEIIAG--GLMEIRKQIQIVNEVYKLHNLPEFYKEARPH 246
           +    K + + N + +RTFL ME+  G   L+E+ K   IV+E  K  NL  FY++   H
Sbjct: 184 YCVAYKLKVYSNAEKTRTFLGMEVSTGTPHLLELSK---IVDETMKEFNLSTFYEDPSFH 242

Query: 247 ISFAWALGDLSKLLSQAVHNEMK 261
           IS AW +GD ++ L +A   E++
Sbjct: 244 ISLAWCVGDQTERLKKACLLELQ 242

[Close]
BLAST of Cla97C09G173470 vs. ExPASy Swiss-Prot
Match: Q54W16 (U6 snRNA phosphodiesterase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279967 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.1e-16
Identity = 59/197 (29.95%), Postives = 95/197 (48.22%), Query Frame = 0 

Query: 50  LPPPPLSLL-HFPTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVAL 109
           +P  PLS   +F        ++  +   + R F HV+GNY   +Y    VPT +R ++  
Sbjct: 42  IPDLPLSFFENFKKIKHYSSEIIDETNKKTRLFEHVEGNYPTFIYFK--VPTKSRNDIKE 101

Query: 110 FLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTM 169
            +++V  +                  ++  ++Q     FHIS+SRT PIR H I++    
Sbjct: 102 LIEQVKEI-----------------GNEINIKQDTETCFHISISRTFPIREHHIETFTQE 161

Query: 170 LRQKLQSQRRYWIDFSK-WETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNL 229
           L++ L++QR   I  SK    FIND+ SR FLS+ I       I K I+ ++    L   
Sbjct: 162 LKKTLKNQRSIDIQLSKECCVFINDNQSRIFLSIPINQSFKSNILKLIERIDSCLSLFKF 219

Query: 230 PEFYKEARPHISFAWAL 245
           P++Y    PH+S +W+L
Sbjct: 222 PKYYDNPEPHLSISWSL 219

[Close]
BLAST of Cla97C09G173470 vs. ExPASy Swiss-Prot
Match: Q5I0I5 (U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.0e-16
Identity = 67/259 (25.87%), Postives = 120/259 (46.33%), Query Frame = 0 

Query: 8   YGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLP----PPPLSLLH-FPT 67
           Y  S S++EA+ V+              S P         +PLP    P P S+L+ FP+
Sbjct: 9   YSSSGSEDEAEAVA-----------AGRSKPGSGLHRCGQNPLPSQRFPVPDSVLNMFPS 68

Query: 68  STSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPALHL 127
           +    +D       R+R+FPH +GN+A H+YIP       +  + + L +     P L  
Sbjct: 69  TEEGPEDDSARHGGRIRTFPHERGNWATHIYIPYEANEEFQDLLDVLLPRAQMFAPRLVQ 128

Query: 128 VDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWID 187
           ++                     EFH+SLS++V +R H I   V +L+ ++ S +R++  
Sbjct: 129 ME---------------------EFHLSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFT 188

Query: 188 FSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAW 247
            ++ + + N + +RTF+ +E ++ G  +    +  V+ V K  +L  FY++   H+S AW
Sbjct: 189 ANRVKIYTNQEKTRTFIGLE-VSSGHAQFLDMVSEVDRVMKEFDLTTFYQDPSFHVSLAW 234

Query: 248 ALGDLSKLLSQAVHNEMKK 262
            +GD    L      E+++
Sbjct: 249 CVGDARLQLEGQCQQELQE 234

[Close]
BLAST of Cla97C09G173470 vs. ExPASy Swiss-Prot
Match: Q9BQ65 (U6 snRNA phosphodiesterase OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.7e-15
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 0 

Query: 48  SPLP----PPPLSLLH-FPTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNA 107
           SPLP    P P S+L+ FP +    +D       RVR+FPH +GN+A H+Y+P       
Sbjct: 36  SPLPRQRFPVPDSVLNMFPGTEEGPEDDSTKHGGRVRTFPHERGNWATHVYVPYEAKEEF 95

Query: 108 RKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQI 167
              + + L    + VP L  + +                     FH+SLS++V +R H I
Sbjct: 96  LDLLDVLLPHAQTYVPRLVRMKV---------------------FHLSLSQSVVLRHHWI 155

Query: 168 DSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVY 227
              V  L+ ++ S  R++   ++ + + N + +RTF+ +E+ +G   +    +  V+ V 
Sbjct: 156 LPFVQALKARMTSFHRFFFTANQVKIYTNQEKTRTFIGLEVTSGH-AQFLDLVSEVDRVM 215

Query: 228 KLHNLPEFYKEARPHISFAWALGD 247
           +  NL  FY++   H+S AW +GD
Sbjct: 216 EEFNLTTFYQDPSFHLSLAWCVGD 217

[Close]
BLAST of Cla97C09G173470 vs. ExPASy TrEMBL
Match: A0A1S3CTB0 (U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 1.2e-131
Identity = 244/281 (86.83%), Postives = 257/281 (91.46%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDALRASYGGSSSDEE DTVS SSA        STSTPQ  DETVS  PLPPPPLSLL+F
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPSSA--------STSTPQFFDETVSSLPLPPPPLSLLNF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P ST +LDDLPIDQATRVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPAL
Sbjct: 61  PNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYW
Sbjct: 121 HLVDIDIPLDVLCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGD+S++ SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Sbjct: 241 AWALGDVSQISSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]
BLAST of Cla97C09G173470 vs. ExPASy TrEMBL
Match: A0A6J1HYN3 (U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 7.7e-131
Identity = 245/281 (87.19%), Postives = 257/281 (91.46%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           M+AL ASYGGSSSDE+ADTVS SSAS+S  A  S S PQLSDET SF PLPPPPLSLL F
Sbjct: 1   MEALMASYGGSSSDEDADTVSPSSASASASASASASLPQLSDETESFLPLPPPPLSLLDF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P STS LDDLPI QA RVRSFPHVQGNYA+HLYIPVY+PTNARKEVALFLKK+S LVPAL
Sbjct: 61  PNSTSALDDLPIGQAARVRSFPHVQGNYAVHLYIPVYIPTNARKEVALFLKKLSKLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW
Sbjct: 121 HLVDIDIPLDILCKDDLKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEIIAGGLMEIRK+IQ+VNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKRIQVVNEVYKLHNLPEFYKEARPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGDLSKLLSQ+VH+EMKKS +KE  KRCIFT KFNGIE
Sbjct: 241 AWALGDLSKLLSQSVHDEMKKSMVKEKSKRCIFTAKFNGIE 281

[Close]
BLAST of Cla97C09G173470 vs. ExPASy TrEMBL
Match: A0A0A0KPH5 (U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.4e-129
Identity = 241/281 (85.77%), Postives = 254/281 (90.39%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDALRASYGGSSSDEE DTVS  SA        STS PQ  DETV+F PLPPPPLSLL+F
Sbjct: 1   MDALRASYGGSSSDEEVDTVSPPSA--------STSAPQFLDETVTFLPLPPPPLSLLNF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P ST +LDDLPIDQATRVRSFPHVQGNYALH+YIPVYVPTNARKEVALF+KK+SSLVPAL
Sbjct: 61  PNSTCVLDDLPIDQATRVRSFPHVQGNYALHVYIPVYVPTNARKEVALFMKKISSLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYW
Sbjct: 121 HLVDIDIPLDVLCKDDQKLEQAWAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSPRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQVVNEVYKLHNLPEFYKEARPHISV 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGD+S+L SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Sbjct: 241 AWALGDVSQLSSQAVHNELKRSAVKEPFKRCIFTTKFNGIE 273

[Close]
BLAST of Cla97C09G173470 vs. ExPASy TrEMBL
Match: A0A6J1EQH7 (U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 3.0e-127
Identity = 241/281 (85.77%), Postives = 251/281 (89.32%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           M+AL ASYGGSSSDE+ DTVS SSAS+      S S PQLSDET SF PLPPPPLSLL F
Sbjct: 1   MEALMASYGGSSSDEDVDTVSPSSASA------SASLPQLSDETESFLPLPPPPLSLLDF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P STS LDDLPI QA RVRSFPHVQGNYALHLYIPVY+ TNARKEVALFLKK+S LVPAL
Sbjct: 61  PNSTSALDDLPIGQAARVRSFPHVQGNYALHLYIPVYITTNARKEVALFLKKLSKLVPAL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW
Sbjct: 121 HLVDIDIPLDILCKDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEIIAGGLMEIRK IQ+VNEVYKLHNLPEFYKE RPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKHIQVVNEVYKLHNLPEFYKEGRPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGDLSKLLSQ+VH+EMKKS +KE  KR IFT KFNGIE
Sbjct: 241 AWALGDLSKLLSQSVHDEMKKSMVKEKSKRSIFTAKFNGIE 275

[Close]
BLAST of Cla97C09G173470 vs. ExPASy TrEMBL
Match: A0A6J1DNL4 (U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 9.1e-108
Identity = 211/281 (75.09%), Postives = 233/281 (82.92%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           MDAL+ASY GSSSDEE D VS + +        S   P  S        LPPPPLSLL F
Sbjct: 1   MDALKASYRGSSSDEEDDIVSTAPSD------LSPPPPPPS--------LPPPPLSLLDF 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
           P S S L DLPI Q TR RSFPHV+GNYALH+YIPVY+PT ++KEV LFLKKVSSLVP+L
Sbjct: 61  PNSISALHDLPIAQPTRFRSFPHVEGNYALHVYIPVYIPTTSKKEVVLFLKKVSSLVPSL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLVDID+PL  LC D+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYW
Sbjct: 121 HLVDIDVPLTSLCKDEHKLEQALAREFHISLSRTVPIRVHQIDSIVSMLRQKLQCQRRYW 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDFSKWETF+NDDLSRTFLSMEIIAGGLMEIRKQIQ+VNEVYK HNLPEFYKE RPHIS 
Sbjct: 181 IDFSKWETFVNDDLSRTFLSMEIIAGGLMEIRKQIQVVNEVYKFHNLPEFYKEERPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
           AWALGDLSKLLS+ V ++MK+S++  + KRCIFTTKF+GIE
Sbjct: 241 AWALGDLSKLLSRVVDDKMKRSSMAPS-KRCIFTTKFSGIE 266

[Close]
BLAST of Cla97C09G173470 vs. TAIR 10
Match: AT5G51170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-81
Identity = 160/281 (56.94%), Postives = 197/281 (70.11%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           M+ALRASYG SSSD + D +S +S  ++            S E  S S LPPPPL+LL  
Sbjct: 1   MEALRASYGDSSSDSDTDDLSPASPVTAN-----------SGEKDSIS-LPPPPLALLDS 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
             ST  LD    +   RVR+FPHV GNYALH+Y+PV +P   +KE+  FLKKV+S+VP L
Sbjct: 61  IVSTGSLDFFSTEPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLV+ D+PL  LC DD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY 
Sbjct: 121 HLVEADVPLSILCKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYL 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISF 240
           IDF+KWE F+NDD +R+FLS+EI   GL EI KQI  VNEVYKLHNLPEFYK+ RPHIS 
Sbjct: 181 IDFNKWEVFVNDDHTRSFLSLEITTSGLSEISKQIDAVNEVYKLHNLPEFYKDPRPHISL 240

Query: 241 AWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE 282
            WALGD+   L  AV  E++K      ++  IFT+KF GIE
Sbjct: 241 VWALGDIRTSLKGAVDVELRKLRAGGCVQNRIFTSKFCGIE 269

[Close]
BLAST of Cla97C09G173470 vs. TAIR 10
Match: AT5G51170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-58
Identity = 118/218 (54.13%), Postives = 153/218 (70.18%), Query Frame = 0 

Query: 1   MDALRASYGGSSSDEEADTVSLSSASSSTLALTSTSTPQLSDETVSFSPLPPPPLSLLHF 60
           M+ALRASYG SSSD + D +S +S  ++            S E  S S LPPPPL+LL  
Sbjct: 1   MEALRASYGDSSSDSDTDDLSPASPVTAN-----------SGEKDSIS-LPPPPLALLDS 60

Query: 61  PTSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNARKEVALFLKKVSSLVPAL 120
             ST  LD    +   RVR+FPHV GNYALH+Y+PV +P   +KE+  FLKKV+S+VP L
Sbjct: 61  IVSTGSLDFFSTEPGVRVRNFPHVDGNYALHVYVPVCIPPLPKKEIVCFLKKVASVVPHL 120

Query: 121 HLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYW 180
           HLV+ D+PL  LC DD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY 
Sbjct: 121 HLVEADVPLSILCKDDQKFERALGREFHISLGRNVPLRVHQINSVISMLRQKLQLQKRYL 180

Query: 181 IDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIV 219
           IDF+KWE F+NDD +R+FLS+EI   GL E+  ++ ++
Sbjct: 181 IDFNKWEVFVNDDHTRSFLSLEITTSGLSEVLSKLMLL 206

The following BLAST results are available for this feature:
BLAST of Cla97C09G173470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875355.17.3e-13690.75U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida][more]
XP_038875354.17.3e-13690.75U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida][more]
XP_008467330.12.4e-13186.83PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo][more]
XP_022969741.11.6e-13087.19U6 snRNA phosphodiesterase [Cucurbita maxima][more]
XP_004143673.13.0e-12985.77U6 snRNA phosphodiesterase [Cucumis sativus] >KGN50332.1 hypothetical protein Cs... [more]
BLAST of Cla97C09G173470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q91W786.5e-1827.17U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1[more]
Q6DEF64.2e-1731.94U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1[more]
Q54W162.1e-1629.95U6 snRNA phosphodiesterase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279967 ... [more]
Q5I0I56.0e-1625.87U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1[more]
Q9BQ658.7e-1528.43U6 snRNA phosphodiesterase OS=Homo sapiens OX=9606 GN=USB1 PE=1 SV=1[more]
BLAST of Cla97C09G173470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CTB01.2e-13186.83U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1[more]
A0A6J1HYN37.7e-13187.19U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1[more]
A0A0A0KPH51.4e-12985.77U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1[more]
A0A6J1EQH73.0e-12785.77U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV... [more]
A0A6J1DNL49.1e-10875.09U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 S... [more]
BLAST of Cla97C09G173470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51170.11.4e-8156.94unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0... [more]
AT5G51170.22.9e-5854.13unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027521U6 snRNA phosphodiesterase Usb1PFAMPF09749HVSLcoord: 51..280
e-value: 1.8E-51
score: 174.9
coord: 291..357
e-value: 3.8E-13
score: 49.4
IPR027521U6 snRNA phosphodiesterase Usb1PANTHERPTHR13522UNCHARACTERIZEDcoord: 1..281
coord: 287..359
IPR027521U6 snRNA phosphodiesterase Usb1HAMAPMF_03040USB1coord: 3..289
score: 26.391956
NoneNo IPR availableGENE3D3.90.1140.10Cyclic phosphodiesterasecoord: 284..361
e-value: 1.2E-15
score: 59.5
coord: 80..283
e-value: 1.4E-49
score: 170.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..28

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G173470.2Cla97C09G173470.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0034477 U6 snRNA 3'-end processing
cellular_component GO:0005634 nucleus
molecular_function GO:1990838 poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends
molecular_function GO:0016740 transferase activity
molecular_function GO:0004518 nuclease activity