Cla97C09G168740 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C09G168740
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	nuclear transcription factor Y subunit B-1
Location	Cla97Chr09: 5083387 .. 5083866 (-)
RNA-Seq Expression	Cla97C09G168740
Synteny	Cla97C09G168740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAAACACAGGCATGTCAGAGAGATTAGTAGAATTTAAGTACGATTTCAGCGGCGGCGGTGGCGGTGTCGGTGGTAGCACCGGTGGTTCGAGTGAGGAAGCTGGTAACGGCGTTGGCGGGGTCGTAAAAGAGCAAGATCGGTTACTTCCAATAGCAAATGTGGGGAGGATCATGAAGCAAATTCTACCTCCAAATGCCAAAATCTCCAAAGAAGCCAAAGAAACTATGCAAGAGTGCGTGTCGGAGTTCATCAGTTTCGTGACAGGCGAGGCGTCGGATAAGTGCCATAAAGAGAAGAGGAAGACTGTTAATGGTGATGATATTTGCTGTGCTTTGGCCACACTTGGATTTGATGATTATGCTGAGCCTTTGAGAAGGTATTTGGTTAGGTATAGAGATATGGAGGGGGAGAGAGCTCAACAAAATAAGGGATGTTGCAATAATAATACTAATAATAATAATCATGATGCATGA

mRNA sequence

ATGGATGAAAACACAGGCATGTCAGAGAGATTAGTAGAATTTAAGTACGATTTCAGCGGCGGCGGTGGCGGTGTCGGTGGTAGCACCGGTGGTTCGAGTGAGGAAGCTGGTAACGGCGTTGGCGGGGTCGTAAAAGAGCAAGATCGGTTACTTCCAATAGCAAATGTGGGGAGGATCATGAAGCAAATTCTACCTCCAAATGCCAAAATCTCCAAAGAAGCCAAAGAAACTATGCAAGAGTGCGTGTCGGAGTTCATCAGTTTCGTGACAGGCGAGGCGTCGGATAAGTGCCATAAAGAGAAGAGGAAGACTGTTAATGGTGATGATATTTGCTGTGCTTTGGCCACACTTGGATTTGATGATTATGCTGAGCCTTTGAGAAGGTATTTGGTTAGGTATAGAGATATGGAGGGGGAGAGAGCTCAACAAAATAAGGGATGTTGCAATAATAATACTAATAATAATAATCATGATGCATGA

Coding sequence (CDS)

ATGGATGAAAACACAGGCATGTCAGAGAGATTAGTAGAATTTAAGTACGATTTCAGCGGCGGCGGTGGCGGTGTCGGTGGTAGCACCGGTGGTTCGAGTGAGGAAGCTGGTAACGGCGTTGGCGGGGTCGTAAAAGAGCAAGATCGGTTACTTCCAATAGCAAATGTGGGGAGGATCATGAAGCAAATTCTACCTCCAAATGCCAAAATCTCCAAAGAAGCCAAAGAAACTATGCAAGAGTGCGTGTCGGAGTTCATCAGTTTCGTGACAGGCGAGGCGTCGGATAAGTGCCATAAAGAGAAGAGGAAGACTGTTAATGGTGATGATATTTGCTGTGCTTTGGCCACACTTGGATTTGATGATTATGCTGAGCCTTTGAGAAGGTATTTGGTTAGGTATAGAGATATGGAGGGGGAGAGAGCTCAACAAAATAAGGGATGTTGCAATAATAATACTAATAATAATAATCATGATGCATGA

Protein sequence

MDENTGMSERLVEFKYDFSGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHDA

Homology

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BLAST of Cla97C09G168740 vs. NCBI nr
Match: XP_008451614.1 (PREDICTED: nuclear transcription factor Y subunit B-1 [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFSGGG-GGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER VEFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSVEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNN NNNN++
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNNNNNNNN 159

[Close]

BLAST of Cla97C09G168740 vs. NCBI nr
Match: XP_011659350.1 (nuclear transcription factor Y subunit B-5 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFSGGG-GGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER +EFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSIEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN+ NNNN+D
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNSNNNNNND 159

[Close]

BLAST of Cla97C09G168740 vs. NCBI nr
Match: XP_038876756.1 (nuclear transcription factor Y subunit B-1-like [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFSGGGG-GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ERLVEFKYDF+GGGG GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERLVEFKYDFTGGGGSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYR+MEGERAQQNKGCC    NNNNHD
Sbjct: 121 DDYAEPLRRYLVRYREMEGERAQQNKGCC----NNNNHD 155

[Close]

BLAST of Cla97C09G168740 vs. NCBI nr
Match: XP_023549145.1 (nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 145/160 (90.62%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDF-SGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MD+NT M ERLVEFKYDF +GGGGGVGGSTGGSSEEAG+G+GG VKEQDRLLPIANVGRI
Sbjct: 1   MDDNTPMPERLVEFKYDFTTGGGGGVGGSTGGSSEEAGSGIGGFVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHDA 160
           DDYAEPLRRYL+RYR++EGERAQQNKGCCNNNT    HDA
Sbjct: 121 DDYAEPLRRYLIRYREIEGERAQQNKGCCNNNT----HDA 156

[Close]

BLAST of Cla97C09G168740 vs. NCBI nr
Match: KAG6575846.1 (Nuclear transcription factor Y subunit B-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 5.1e-73
Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFS----GGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANV 60
           MD+NT M ERLVEFKYDF+    GGGGGVGGSTGGSSEEAG+G+GG VKEQDRLLPIANV
Sbjct: 1   MDDNTPMPERLVEFKYDFTTGGGGGGGGVGGSTGGSSEEAGSGIGGFVKEQDRLLPIANV 60

Query: 61  GRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALAT 120
           GRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALAT
Sbjct: 61  GRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALAT 120

Query: 121 LGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHDA 160
           LGFDDYAEPLRRYL+RYR++EGERAQQNKGCCNNNT    HDA
Sbjct: 121 LGFDDYAEPLRRYLIRYREIEGERAQQNKGCCNNNT----HDA 159

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BLAST of Cla97C09G168740 vs. ExPASy Swiss-Prot
Match: O82248 (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NFYB5 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.1e-41
Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 43  VVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKR 102
           +VKEQDRLLPIANVGRIMK ILP NAK+SKEAKETMQECVSEFISFVTGEASDKCHKEKR
Sbjct: 48  MVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKR 107

Query: 103 KTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQN-KGCCNNNTNN 155
           KTVNGDDIC A+A LGFDDYA  L++YL RYR +EGE+   + KG   ++ +N
Sbjct: 108 KTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSSPDN 160

[Close]

BLAST of Cla97C09G168740 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 79/123 (64.23%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 20  GGGGG---VGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKE 79
           GGGGG    G   GG     G G GG V+EQDR LPIAN+ RIMK+ +P N KI+K+AKE
Sbjct: 9   GGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKE 68

Query: 80  TMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDM 139
           T+QECVSEFISF+T EASDKC +EKRKT+NGDD+  A+ATLGF+DY EPL+ YL +YR+M
Sbjct: 69  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREM 128

[Close]

BLAST of Cla97C09G168740 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.1e-37
Identity = 81/123 (65.85%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 19  SGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETM 78
           + GGGG G S G      G G     KEQDR LPIANV RIMK+ LP NAKISKE+KET+
Sbjct: 31  AAGGGGCGSSAGYVVYGGGGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETV 90

Query: 79  QECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEG 138
           QECVSEFISFVTGEASDKC +EKRKT+NGDD+  A+ TLGF+ Y  PL+ YL RYR+ EG
Sbjct: 91  QECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEG 150

Query: 139 ERA 142
           E+A
Sbjct: 151 EKA 153

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BLAST of Cla97C09G168740 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.0e-37
Identity = 77/118 (65.25%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 22  GGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQEC 81
           GGG G    GS    G G GG V+EQDR LPIAN+ RIMK+ +P N KI+K+AKET+QEC
Sbjct: 9   GGGGGSHESGSPR--GGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQEC 68

Query: 82  VSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGE 140
           VSEFISF+T EASDKC +EKRKT+NGDD+  A+ATLGF+DY EPL+ YL +YR+MEG+
Sbjct: 69  VSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 124

[Close]

BLAST of Cla97C09G168740 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 75/113 (66.37%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 29  TGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISF 88
           +GG S  AG  +    +EQDR LPIANV RIMK+ LP NAKISK+AKET+QECVSEFISF
Sbjct: 8   SGGPSNYAGGELSS-PREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF 67

Query: 89  VTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERA 142
           +TGEASDKC +EKRKT+NGDD+  A+ TLGF+DY +PL+ YL ++R++EGERA
Sbjct: 68  ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERA 119

[Close]

BLAST of Cla97C09G168740 vs. ExPASy TrEMBL
Match: A0A1S3BT19 (nuclear transcription factor Y subunit B-1 OS=Cucumis melo OX=3656 GN=LOC103492848 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.2e-77
Identity = 151/159 (94.97%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFSGGG-GGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER VEFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSVEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNN NNNN++
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNNNNNNNN 159

[Close]

BLAST of Cla97C09G168740 vs. ExPASy TrEMBL
Match: A0A0A0K954 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G395250 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.2e-77
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFSGGG-GGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MDENTGM ER +EFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI
Sbjct: 1   MDENTGMPERSIEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           DDYAEPLRRYLVRYRDMEGERAQQNKGCCNN+ NNNN+D
Sbjct: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNSNNNNNND 159

[Close]

BLAST of Cla97C09G168740 vs. ExPASy TrEMBL
Match: A0A5A7VLD2 (Nuclear transcription factor Y subunit B-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002260 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73
Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 7   MSERLVEFKYDFSGGG-GGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILP 66
           M ER VEFKYDF+GGG  GVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILP
Sbjct: 1   MPERSVEFKYDFTGGGSSGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILP 60

Query: 67  PNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEP 126
           PNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEP
Sbjct: 61  PNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEP 120

Query: 127 LRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHD 159
           LRRYLVRYRDMEGERAQQNKGCCNNN NNNN++
Sbjct: 121 LRRYLVRYRDMEGERAQQNKGCCNNNNNNNNNN 153

[Close]

BLAST of Cla97C09G168740 vs. ExPASy TrEMBL
Match: A0A6J1JM11 (nuclear transcription factor Y subunit B-1 OS=Cucurbita maxima OX=3661 GN=LOC111488106 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73
Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDF-SGGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRI 60
           MD+NT M ERLVEFKYDF +GGGGGVGGSTGGSSEEAG+G+GG VKEQDRLLPIANVGRI
Sbjct: 1   MDDNTPMPERLVEFKYDFTTGGGGGVGGSTGGSSEEAGSGIGGFVKEQDRLLPIANVGRI 60

Query: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120
           MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF
Sbjct: 61  MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGF 120

Query: 121 DDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHDA 160
           DDYAEPLRRYL+RYR++EGERAQQNKGCCNNN     HDA
Sbjct: 121 DDYAEPLRRYLIRYREIEGERAQQNKGCCNNNA----HDA 156

[Close]

BLAST of Cla97C09G168740 vs. ExPASy TrEMBL
Match: A0A6J1GM85 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN=LOC111455784 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.1e-73
Identity = 144/161 (89.44%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1   MDENTGMSERLVEFKYDFS--GGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGR 60
           MD+NT M ERLVEFKYDF+  GG GGVGGSTGGSSEEAG+G+GG VKEQDRLLPIANVGR
Sbjct: 1   MDDNTPMPERLVEFKYDFTTGGGSGGVGGSTGGSSEEAGSGIGGFVKEQDRLLPIANVGR 60

Query: 61  IMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLG 120
           IMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLG
Sbjct: 61  IMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLG 120

Query: 121 FDDYAEPLRRYLVRYRDMEGERAQQNKGCCNNNTNNNNHDA 160
           FDDYAEPLRRYL+RYR++EGERAQQNKGCCNNNT    HDA
Sbjct: 121 FDDYAEPLRRYLIRYREIEGERAQQNKGCCNNNT----HDA 157

[Close]

BLAST of Cla97C09G168740 vs. TAIR 10
Match: AT2G47810.1 (nuclear factor Y, subunit B5 )

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42
Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 43  VVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKR 102
           +VKEQDRLLPIANVGRIMK ILP NAK+SKEAKETMQECVSEFISFVTGEASDKCHKEKR
Sbjct: 48  MVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKR 107

Query: 103 KTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQN-KGCCNNNTNN 155
           KTVNGDDIC A+A LGFDDYA  L++YL RYR +EGE+   + KG   ++ +N
Sbjct: 108 KTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSSPDN 160

[Close]

BLAST of Cla97C09G168740 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 154.1 bits (388), Expect = 9.6e-38
Identity = 81/127 (63.78%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 20  GGGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQ 79
           GGGGG   S G  S  + N     V+EQDR LPIAN+ RIMK+ LP N KI+K+AKETMQ
Sbjct: 8   GGGGGSHESGGDQSPRSLN-----VREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQ 67

Query: 80  ECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGE 139
           ECVSEFISFVT EASDKC +EKRKT+NGDD+  A+ATLGF+DY +PL+ YL+RYR+MEG+
Sbjct: 68  ECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGD 127

Query: 140 RAQQNKG 147
                KG
Sbjct: 128 TKGSGKG 129

[Close]

BLAST of Cla97C09G168740 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 80/125 (64.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 21  GGGGVGGSTGGSSEEAGNGVGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQE 80
           G  GV  +  GS     N      KEQDR LPIANVGRIMK++LP N KISK+AKET+QE
Sbjct: 11  GSPGVAETNPGSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQE 70

Query: 81  CVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGER 140
           CVSEFISFVTGEASDKC +EKRKT+NGDDI  A+ TLGF+DY  PL+ YL +YRD EGE+
Sbjct: 71  CVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130

Query: 141 AQQNK 146
               K
Sbjct: 131 VNSPK 135

[Close]

BLAST of Cla97C09G168740 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 82/129 (63.57%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 33  SEEAGNG--VGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVT 92
           S  AG+G   GG V+EQDR LPIAN+ RIMK+ LPPN KI K+AK+T+QECVSEFISF+T
Sbjct: 6   SSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFIT 65

Query: 93  GEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 152
            EASDKC KEKRKTVNGDD+  A+ATLGF+DY EPL+ YL RYR++EG+    NKG    
Sbjct: 66  SEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD----NKG-SGK 125

Query: 153 NTNNNNHDA 160
           + + +N DA
Sbjct: 126 SGDGSNRDA 129

[Close]

BLAST of Cla97C09G168740 vs. TAIR 10
Match: AT2G38880.3 (nuclear factor Y, subunit B1 )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 82/129 (63.57%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 33  SEEAGNG--VGGVVKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVT 92
           S  AG+G   GG V+EQDR LPIAN+ RIMK+ LPPN KI K+AK+T+QECVSEFISF+T
Sbjct: 6   SSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFIT 65

Query: 93  GEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLVRYRDMEGERAQQNKGCCNN 152
            EASDKC KEKRKTVNGDD+  A+ATLGF+DY EPL+ YL RYR++EG+    NKG    
Sbjct: 66  SEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD----NKG-SGK 125

Query: 153 NTNNNNHDA 160
           + + +N DA
Sbjct: 126 SGDGSNRDA 129

The following BLAST results are available for this feature:

BLAST of Cla97C09G168740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451614.1	1.3e-76	94.97	PREDICTED: nuclear transcription factor Y subunit B-1 [Cucumis melo]	[more]
XP_011659350.1	1.7e-76	94.34	nuclear transcription factor Y subunit B-5 [Cucumis sativus]	[more]
XP_038876756.1	1.1e-75	94.97	nuclear transcription factor Y subunit B-1-like [Benincasa hispida]	[more]
XP_023549145.1	2.3e-73	90.63	nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6575846.1	5.1e-73	88.96	Nuclear transcription factor Y subunit B-5, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cla97C09G168740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82248	4.1e-41	76.11	Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	1.6e-37	64.23	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0J7P4	6.1e-37	65.85	Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3...	[more]
P25209	8.0e-37	65.25	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]
Q75IZ7	1.4e-36	66.37	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Cla97C09G168740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BT19	6.2e-77	94.97	nuclear transcription factor Y subunit B-1 OS=Cucumis melo OX=3656 GN=LOC1034928...	[more]
A0A0A0K954	8.2e-77	94.34	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G3952...	[more]
A0A5A7VLD2	3.2e-73	94.77	Nuclear transcription factor Y subunit B-1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1JM11	4.2e-73	90.00	nuclear transcription factor Y subunit B-1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GM85	7.1e-73	89.44	nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cla97C09G168740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47810.1	2.9e-42	76.11	nuclear factor Y, subunit B5	[more]
AT3G53340.1	9.6e-38	63.78	nuclear factor Y, subunit B10	[more]
AT2G13570.1	1.3e-37	64.00	nuclear factor Y, subunit B7	[more]
AT2G38880.2	1.3e-37	63.57	nuclear factor Y, subunit B1	[more]
AT2G38880.3	1.3e-37	63.57	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 97..115 score: 34.21 coord: 78..96 score: 51.32 coord: 116..134 score: 34.09
None	No IPR available	PANTHER	PTHR11064:SF106	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5	coord: 34..156
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 50..114 e-value: 6.7E-27 score: 93.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 42..159 e-value: 2.8E-43 score: 149.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 47..156
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 34..156
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 81..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G168740.1	Cla97C09G168740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding