Cla97C09G167370 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G167370
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 4161021 .. 4162013 (-)
RNA-Seq ExpressionCla97C09G167370
SyntenyCla97C09G167370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCTTTACAAAAACATAAAGAAAATGTGAAATTACAAAATTTCGTCTATTTGACTCTTAAATTTTTAAAAGTGTCTACTCTTTTAAACTTTCAATTTTGTGTCTAGTAAGTCTCTGAGTTTAAAAAATGTACAATAGTTTCATCAATTTTTAATTTTGTGAGCAATAAGCCATATTCAATTTTAAAAGAAAAAATTAACTGAAATTTTAGATGACATGACATTCAAACCTTTCAATTTAATTATTAGGACATAAATTTTTAAAAAAGACGAGTGAATTAATGTCGTATTAGCATATTTTTTTTAATTTAATAATATTTTATTAGAGACCAAATTAAAAGTGAAGTAAATTATAAATTTAATGGAAAGGAAAATAAGATTCTAATTTTGAGAAAGAAAAGTATCGAAATCCATTTCTCTTGCTACAAAAAGCCTATCTTTTCGCGAAAAGAGATCTTTCTTACAATTTATTGAAACTAATTCTTAATTCAACAAAACAATTAGCATAAAAAAACTAATTTCCCCATCAGAATTAAAGTAATTCCCCCTGGATAGAAGAAAAGGAAAAAAACACCCCCAAAAAAAAACAAACTTTACCGGTTCCAGAAATTTCCAAATGTAGCCGACGATTTCAAAATCAAATTTCATGGGGAATTATTGTTTCCATTGGTGTTTGACCCGTTTCAAGCGAATATAAATATCATCCAAGGATTGACTCAGTCGTCGGTCGCCGTCTCCGATCAGAACAAATTCTCACGCCCGATTTTGATAAAGAAAGGTTTACTTTCATTATTTTACGATGACCCATTTCATTAAACTATATTTTTCTTTTTCCAATAATGCTTGTTTTAATTTCCAGATGATCAGAAGAACAGTATCGAAATCGATTTGGAATCTGTCGGTCTGAGCAGGAAAACGCTTGGATTTGGGTATGTTTGTACTGAATCCTTACTATTGGGTTTCTGGATTATTCGATTCGACTCATTCTAG

mRNA sequence

ATGAAATTTCCAAATGTAGCCGACGATTTCAAAATCAAATTTCATGGGGAATTATTGTTTCCATTGGTGTTTGACCCGTTTCAAGCGAATATAAATATCATCCAAGGATTGACTCAGTCGTCGGTCGCCGTCTCCGATCAGAACAAATTCTCACGCCCGATTTTGATAAAGAAAGATGATCAGAAGAACAGTATCGAAATCGATTTGGAATCTGTCGGTCTGAGCAGGAAAACGCTTGGATTTGGGTATGTTTGTACTGAATCCTTACTATTGGGTTTCTGGATTATTCGATTCGACTCATTCTAG

Coding sequence (CDS)

ATGAAATTTCCAAATGTAGCCGACGATTTCAAAATCAAATTTCATGGGGAATTATTGTTTCCATTGGTGTTTGACCCGTTTCAAGCGAATATAAATATCATCCAAGGATTGACTCAGTCGTCGGTCGCCGTCTCCGATCAGAACAAATTCTCACGCCCGATTTTGATAAAGAAAGATGATCAGAAGAACAGTATCGAAATCGATTTGGAATCTGTCGGTCTGAGCAGGAAAACGCTTGGATTTGGGTATGTTTGTACTGAATCCTTACTATTGGGTTTCTGGATTATTCGATTCGACTCATTCTAG

Protein sequence

MKFPNVADDFKIKFHGELLFPLVFDPFQANINIIQGLTQSSVAVSDQNKFSRPILIKKDDQKNSIEIDLESVGLSRKTLGFGYVCTESLLLGFWIIRFDSF
Homology
[Close]
BLAST of Cla97C09G167370 vs. NCBI nr
Match: KAG6575751.1 (WRKY transcription factor 23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 74.7 bits (182), Expect = 5.1e-10
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 7   ADDFKIKFHGELLFPLVFDPFQANINIIQGLTQSSVAVSDQNKFSRPILIKKDDQKNSIE 66
           +DDF I +  EL FPLVFDPF ANINIIQGLTQSSVAVSDQ+KFSR   IK+    +S+E
Sbjct: 286 SDDFIINW--ELSFPLVFDPFGANINIIQGLTQSSVAVSDQDKFSRSSFIKETYGLDSLE 344

Query: 67  I 68
           +
Sbjct: 346 V 344

The following BLAST results are available for this feature:
BLAST of Cla97C09G167370 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575751.15.1e-1067.21WRKY transcription factor 23, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cla97C09G167370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G167370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G167370 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G167370.1Cla97C09G167370.1mRNA