Cla97C09G166550 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATCTTGGAAGTGCCGGAAATCGCCATTGAAAGTGAAAGAAATTACTTAAGAGAAGAAAAGGAATGTGTGTGAATTCTGGAAATTGTGAGTCGGTGAAATGAGAGCGTTGTATTCGGAGCTTATTTATAGGGTGGCCGGAAGGCGTGTGGACCCCACCGGGACTAGGCGTCCAATTGCGTGGTGAAAAGTCGCGTGAGATTTGTGGCCACGTGGAATACAAAAAAACTAAAAACTAATTAAATTATTTGTGTTCGCTGCAAATTGTGTTTTTTTTTTTTTTCCTTTCTCAATTTCAATACCGTTGAAAATTGAAGTTAACATATTTATTGAAGAATTTTTTTTTAAATTTTTTTATTTTAAGTGATAAAATTAAAAAATAAAAAATAAATTTAAATTAGTAAATAAATGTTTTATGATTTTTTGAACAAGTTGACATGTCTATTATTTAAATTATATTTATATTAGTAACATTTCGTGATTATCTTTTATGTTTCGTGGATTTTTCTACGATATAATGGAGATTTCGATTCACCTCTAATGTCGATATCAAATCTATGGAAACAAAAAAAATATAGAGATGTTGACGGAAAATTAATACTATGATTCTCACATAATTTTAGAACTTAATTCAACGCTCTATACAGTCGCTAAAATTAACATTTTTTAGTAGTTTAATCTTTTTATTAATGTTACGAATAATATTTTAATCAATTGAATTGTGCTCAAATTGACATTTTGCGTTTAAAGATCATATATCATAGTTATAGTGTCAAATAAATGTCTAAAATTAAATTAACAACAACTTACAAGGACTTGTTAAACATTTTTTTAAAAAGAAGTTATAAATCTATTAGACACAGAACAAAATGTTTAGAAATCTTATGGTTTAAAAAAACAAAAATTAGAGACATGTTCTAGACAACATTGAGATTGAAAAAAAAAAAAGACACAAAGATACAAATAGAGCATCCAACCCCAAATACGACACGAACTCTCCATTAATGATAGAGATAATACAATTATAAAATTTATCCTTCCACCTAAAAGAATCCTTAAGAGATGATGTGAAAGTTGCAACAGAGTAAGCAACTTTATTCTCCTTTCTGAGAGAGAAACAAAAGTATTTAGCATTTGGTGGATACAACAAAAATATCTAATTCAGTAAGTTCAAACTACTTAAAAACTAAGCAAACCAATAAGGTCTACAGCGTTAGACTCCACGCGGTAAGAAAATTTGTTCTTAAAAGATGTTAAAATTGAAATTTAATTGATATGGTTAAAGCTAAATTACTTCATGTTTGTTTAAGAGTGTTGTATTAATTTTTAGCCTTTGTTATTAGTCAAGAATTACTTTGGAAATTAAATCCTCTATGCATTAATTTTAATCGTTGATTTGCTTAATATGACATCTAATGAAGTATACATATGTGTAAAAGTTTTAAAACCATAGGTCTGTTTGTGGGCTGTCGTCTGTTGAAAGGAAAAAAGAAAGGAGGAGCTTGGCGTTTGGGTTGAAGAAGGAAAGAAGAAAACGCGGCGTTTAATTCAAAGGCGGTGGGGGGTAAAACTGAGATTTCACATGTTGGGACTTGGGAGATTGAGGTTGAAGTTGTTCAACCAAAACACACGAAACGGGGAAGTGTGTTCTCATTTCTTGACTTCAAATTCTTATTATTTGTTGTGTGTTACACCTTTCCTTTCTTTTTCTATTTTCCTCCAAAAATTAAATATATATATACATGTTTTAATTTAACCATTGTATTTTAAAATATTACACTTTTAGTCTTTATGTTTTGAATTTTATTTCAATTTGATTTTTAAATGTTCACGGATCACGGATCACGAATTATTTTGAGGAATCAAGAACTTATTCCCGCCAAAATTCTTCTACTCTTCTAGCCTGCCCTGCTTCTATTTGATTAAATAATGTATGACAATAATAGTAAAAAGCTTATATAATTTTAATGTATTTTAATACAAATATTTAAAAAAATAGTTTTTTATTTTTTATTTTTTTACACAGAGACTTGATTTCCAAAGAGGAACGATGTGAAAAAATTACCCCACCCGTTATCATCCCTACCAATAGGTCATGAAATATTCTAATAACTTCGTTTTTTAAATGGTAGAATCCCTTTGACAAATAATAATAATACATTTTGTGTGGAATATATTATAAATTCTTCATTTTTTTAGGGATTTAAAATCAGTAATTATTGCTCTTACAAGTTACAATATATTTATATTTTAATAAACAACAACAAACCCCCAAAATTTTTCATTTAAGTTCGTTTTGTTATGTTCAATGATATAAGGTAGGAGGATTCAAAGTTTAAGTCCATGATGATGGATGCAAACGAACATTTTCATTAAAAGCAAAAAAAAAATTTACTCATAATATAAGACACAATCCAACAAGTTTGACATTAATAATATTGCATAAATTAACAACCATTTAAAGTAATCTTTCTTATTTAAGAGATTCAAATACCCATATCTTACTTGTTACACCAAAAAATATTTGAATCTCCCTCTTCAAAATTGCAATCTAGTATTGAATTCCGTTACGAATTTAATATATAATTATCGATAGTGCTTAATCGTTTACTAAATTATATAGAGGTGTTTAAAAGTATATTATACATATTATGCATTCTTCTGAAAAACGAGATATTATACATAAAACAAAAAATAATTTAAAAGTAGCATTAAAGTGGAAAAGTGAAAGAAAGGAAAAACCAAGTTGTAATTAGTAATATTTTGAATCAGCCCCACTAGCCACAAGCGGGAAAAAAGGGCCGACATAAGACTCGCTCAAACTAGTTATTTAATTTTTAACCAATTAAACAAAACAATACCTTTTTTTTTAAATGAAATTCCAAAATTAGCATCCTGATTTACCTATAAATAATCTCAATTAGCTTAATTGTTCCTCAGGCAGCAATCCAACAATCAGAGGCTTCTTCGGTTCGATCGCTCCATCTCAATCGGAAGTGAGTTTTCTGCCGAAGAAAGCCAATTCAATCTCATCCGCCATGGAAATGAAGAACTTCGCTTGCGCCGCCCTCTTCGCCGCCGCCACCCTCAGCGCCGCCGTTGCTGCCGATGAGTCTCTCTCTCCTGCCGCTGCGCCGGGGCCGAGCAGCGCCGCCTCCGCCGCTCTCCCCTCCCTCGGATCCCTCGTCGGTGCCTCACTTGTTTCCTTCGTTGCCTACTTCTTGAACTGAAGCCCCGCCCCAGAGAGGGAGATTCTAATTGAAATTTTATGTTTACTTTTTTCATTTTTCTTTATGTGTTTGGTTTTTACGAATGTCGATGGATGATGTGATGTGACGTCATATATAAATGAAAATTAAGAA ATGGAGATCTTGGAAGTGCCGGAAATCGCCATTGAAAGTGAAAGAAATTACTTAAGAGAAGAAAAGGAATGGTGGCCGGAAGGCGTGTGGACCCCACCGGGACTAGGCGTCCAATTGCGTGGTGAAAAGTCGCGTCTGTTTGTGGGCTGTCGTCTGTTGAAAGGAAAAAAGAAAGGAGGAGCTTGGCGCAGCAATCCAACAATCAGAGGCTTCTTCGGTTCGATCGCTCCATCTCAATCGGAAGTGAGTTTTCTGCCGAAGAAAGCCAATTCAATCTCATCCGCCATGGAAATGAAGAACTTCGCTTGCGCCGCCCTCTTCGCCGCCGCCACCCTCAGCGCCGCCGTTGCTGCCGATGAGTCTCTCTCTCCTGCCGCTGCGCCGGGGCCGAGCAGCGCCGCCTCCGCCGCTCTCCCCTCCCTCGGATCCCTCGTCGGTGCCTCACTTGTTTCCTTCGTTGCCTACTTCTTGAACTGAAGCCCCGCCCCAGAGAGGGAGATTCTAATTGAAATTTTATGTTTACTTTTTTCATTTTTCTTTATGTGTTTGGTTTTTACGAATGTCGATGGATGATGTGATGTGACGTCATATATAAATGAAAATTAAGAA ATGGAGATCTTGGAAGTGCCGGAAATCGCCATTGAAAGTGAAAGAAATTACTTAAGAGAAGAAAAGGAATGGTGGCCGGAAGGCGTGTGGACCCCACCGGGACTAGGCGTCCAATTGCGTGGTGAAAAGTCGCGTCTGTTTGTGGGCTGTCGTCTGTTGAAAGGAAAAAAGAAAGGAGGAGCTTGGCGCAGCAATCCAACAATCAGAGGCTTCTTCGGTTCGATCGCTCCATCTCAATCGGAAGTGAGTTTTCTGCCGAAGAAAGCCAATTCAATCTCATCCGCCATGGAAATGAAGAACTTCGCTTGCGCCGCCCTCTTCGCCGCCGCCACCCTCAGCGCCGCCGTTGCTGCCGATGAGTCTCTCTCTCCTGCCGCTGCGCCGGGGCCGAGCAGCGCCGCCTCCGCCGCTCTCCCCTCCCTCGGATCCCTCGTCGGTGCCTCACTTGTTTCCTTCGTTGCCTACTTCTTGAACTGA MEILEVPEIAIESERNYLREEKEWWPEGVWTPPGLGVQLRGEKSRLFVGCRLLKGKKKGGAWRSNPTIRGFFGSIAPSQSEVSFLPKKANSISSAMEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPSLGSLVGASLVSFVAYFLN Homology
BLAST of Cla97C09G166550 vs. NCBI nr
Match: XP_038899473.1 (arabinogalactan protein 23-like [Benincasa hispida]) HSP 1 Score: 93.2 bits (230), Expect = 2.2e-15 Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of Cla97C09G166550 vs. NCBI nr
Match: XP_023528634.1 (arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-14 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Cla97C09G166550 vs. NCBI nr
Match: XP_023004714.1 (arabinogalactan peptide 23-like [Cucurbita maxima]) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-14 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Cla97C09G166550 vs. NCBI nr
Match: XP_022960230.1 (arabinogalactan peptide 23-like [Cucurbita moschata]) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-14 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Cla97C09G166550 vs. NCBI nr
Match: KAG7025661.1 (Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 89.4 bits (220), Expect = 3.1e-14 Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Cla97C09G166550 vs. ExPASy Swiss-Prot
Match: Q8S2W4 (Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 8.2e-10 Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of Cla97C09G166550 vs. ExPASy TrEMBL
Match: A0A6J1KX42 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111497929 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 5.2e-15 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Cla97C09G166550 vs. ExPASy TrEMBL
Match: A0A6J1H8I1 (arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111461032 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 6.8e-15 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Cla97C09G166550 vs. ExPASy TrEMBL
Match: A0A6J1F3F5 (arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111439670 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 7.5e-14 Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of Cla97C09G166550 vs. ExPASy TrEMBL
Match: A0A6J1IYE9 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111479619 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13 Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of Cla97C09G166550 vs. ExPASy TrEMBL
Match: A0A1S3CDX5 (arabinogalactan peptide 23-like OS=Cucumis melo OX=3656 GN=LOC103499912 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10 Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of Cla97C09G166550 vs. TAIR 10
Match: AT3G57690.1 (arabinogalactan protein 23 ) HSP 1 Score: 65.1 bits (157), Expect = 5.8e-11 Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of Cla97C09G166550 vs. TAIR 10
Match: AT2G41905.1 (BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 7.9e-08 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|