Cla97C09G164840 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGGCAAGCTCAGGTAATTAATTAGGAAATTAATTAGTTCTGTTTAGTGTATAATTATATATATTTATTAAGAGTAAATTATTAATTGATTGGTTTGATTTTAATTTTATGAGCAGGTAAAGAAAGATGAGATTTTGGACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAAGCATCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGGTATTTTCTTTAAAAAAATTATTATTAGTTTTTCATTAGAAAAAGATTTGTATACTAAGGTTATTTTTTGGCGAAATATATATAGACGGGAGAGCAAGTGAAAAACATGGCACAAGGAGCAGCTGAAGCAGTAAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCACCAACCCTACCACCAACCCTACCAACAATCCATCCACTAGAATTTAA ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGGCAAGCTCAGGTAAAGAAAGATGAGATTTTGGACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAAGCATCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACGGGAGAGCAAGTGAAAAACATGGCACAAGGAGCAGCTGAAGCAGTAAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCACCAACCCTACCACCAACCCTACCAACAATCCATCCACTAGAATTTAA ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGGCAAGCTCAGGTAAAGAAAGATGAGATTTTGGACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAAGCATCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACGGGAGAGCAAGTGAAAAACATGGCACAAGGAGCAGCTGAAGCAGTAAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCACCAACCCTACCACCAACCCTACCAACAATCCATCCACTAGAATTTAA MASHQDISHKAGEIVGQAQVKKDEILDQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNNPTTNPTTNPTNNPSTRI Homology
BLAST of Cla97C09G164840 vs. NCBI nr
Match: XP_038899752.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 180.3 bits (456), Expect = 9.6e-42 Identity = 102/113 (90.27%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of Cla97C09G164840 vs. NCBI nr
Match: KAA0058773.1 (late embryogenesis abundant protein 1 [Cucumis melo var. makuwa] >TYK10567.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 148.3 bits (373), Expect = 4.0e-32 Identity = 91/120 (75.83%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Cla97C09G164840 vs. NCBI nr
Match: XP_008461082.1 (PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30 Identity = 87/114 (76.32%), Postives = 95/114 (83.33%), Query Frame = 0
BLAST of Cla97C09G164840 vs. NCBI nr
Match: XP_004136082.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN45294.1 hypothetical protein Csa_016519 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 7.1e-29 Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 0
BLAST of Cla97C09G164840 vs. NCBI nr
Match: XP_023000409.1 (late embryogenesis abundant protein 1 [Cucurbita maxima]) HSP 1 Score: 137.5 bits (345), Expect = 7.1e-29 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.9e-06 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.8e-06 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.8e-04 Identity = 52/166 (31.33%), Postives = 69/166 (41.57%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy TrEMBL
Match: A0A5D3CF20 (Late embryogenesis abundant protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002210 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32 Identity = 91/120 (75.83%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy TrEMBL
Match: A0A1S3CF46 (late embryogenesis abundant protein 1 OS=Cucumis melo OX=3656 GN=LOC103499779 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.3e-31 Identity = 87/114 (76.32%), Postives = 95/114 (83.33%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy TrEMBL
Match: A0A6J1KJU5 (late embryogenesis abundant protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494669 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy TrEMBL
Match: A0A0A0K8V2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433240 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29 Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 0
BLAST of Cla97C09G164840 vs. ExPASy TrEMBL
Match: A0A6J1HHY8 (late embryogenesis abundant protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464504 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28 Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 0
BLAST of Cla97C09G164840 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 77.4 bits (189), Expect = 8.1e-15 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 0
BLAST of Cla97C09G164840 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07 Identity = 40/99 (40.40%), Postives = 50/99 (50.51%), Query Frame = 0
BLAST of Cla97C09G164840 vs. TAIR 10
Match: AT1G15415.1 (The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol. ) HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05 Identity = 43/112 (38.39%), Postives = 55/112 (49.11%), Query Frame = 0
BLAST of Cla97C09G164840 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.4e-05 Identity = 52/166 (31.33%), Postives = 69/166 (41.57%), Query Frame = 0
BLAST of Cla97C09G164840 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.4e-05 Identity = 52/166 (31.33%), Postives = 69/166 (41.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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