Cla97C08G155325 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C08G155325
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	LOB domain-containing protein
Location	Cla97Chr08: 23339079 .. 23339647 (-)
RNA-Seq Expression	Cla97C08G155325
Synteny	Cla97C08G155325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTATGGCCGTCGTACAACTTGTAAATATTTAAGAAGATGCTCTTCCGGTTGTATTTTTTCCCCTTTCTTTCCTTCTAAAAATCCTCAAAGATTCATCATCGTTCATCTAATTTATGGTGCTAGCAACGTCGTTAAATTTTTTTAAGTAAGTTATATTACATCATTTACCATTTTTTCTTCCAACATTAAATTATAATCTAATAAAAGTGATTTAGTAATATTTAATGAAATAATTTGAAGAATTAAATCTCTCATTCTCTTTTGGCTAATTTAATCAGCAACTTCCTATGCACCTACGAGCTGAAGCAGCAGAAAGTTTGTTTTTTTGAGGCAAAATGTAGAATTGAAGATCCAATTTATGGATGTGTTGGAATTCTCTCTCAATTGCAATATCAATTACACGTGGCAGAAACCCAGTTGGCGAAAACTCGAGCTGAGATTGCTTTGCTGCCTTCCAACGTTCAAGAAGCCCAACCCAAAGATTTTGCATTTGAGCCCATTCTAGGCCCAAATAATATTGGGCTTTCCACTCCAGCCCATTGGTTTCATTCTAGCCTTTTCTAA

mRNA sequence

ATGATTTATGGCCGTCGTACAACTTGTAAATATTTAAGAAGATGCTCTTCCGGTTGTATTTTTTCCCCTTTCTTTCCTTCTAAAAATCCTCAAAGATTCATCATCGTTCATCTAATTTATGGTGCTAGCAACGTCCAACTTCCTATGCACCTACGAGCTGAAGCAGCAGAAAGTTTAATTGAAGATCCAATTTATGGATGTGTTGGAATTCTCTCTCAATTGCAATATCAATTACACGTGGCAGAAACCCAGTTGGCGAAAACTCGAGCTGAGATTGCTTTGCTGCCTTCCAACGTTCAAGAAGCCCAACCCAAAGATTTTGCATTTGAGCCCATTCTAGGCCCAAATAATATTGGGCTTTCCACTCCAGCCCATTGGTTTCATTCTAGCCTTTTCTAA

Coding sequence (CDS)

ATGATTTATGGCCGTCGTACAACTTGTAAATATTTAAGAAGATGCTCTTCCGGTTGTATTTTTTCCCCTTTCTTTCCTTCTAAAAATCCTCAAAGATTCATCATCGTTCATCTAATTTATGGTGCTAGCAACGTCCAACTTCCTATGCACCTACGAGCTGAAGCAGCAGAAAGTTTAATTGAAGATCCAATTTATGGATGTGTTGGAATTCTCTCTCAATTGCAATATCAATTACACGTGGCAGAAACCCAGTTGGCGAAAACTCGAGCTGAGATTGCTTTGCTGCCTTCCAACGTTCAAGAAGCCCAACCCAAAGATTTTGCATTTGAGCCCATTCTAGGCCCAAATAATATTGGGCTTTCCACTCCAGCCCATTGGTTTCATTCTAGCCTTTTCTAA

Protein sequence

MIYGRRTTCKYLRRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNVQLPMHLRAEAAESLIEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDFAFEPILGPNNIGLSTPAHWFHSSLF

Homology

[Close]

BLAST of Cla97C08G155325 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 106/147 (72.11%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC+S CIFSPFFPS NPQRF IVH IYGASNV     QLP+HLR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 120
           AAESL       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA L SN+QEAQP DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 AFEPILGPN-----NIGLSTPAHWFHS 130
           A +PI GPN      IGLSTPAHWF+S
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of Cla97C08G155325 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 2.3e-47
Identity = 105/147 (71.43%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP+HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 120
           AAE+L       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA L SN+QEAQP+DF
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120

Query: 121 AFEPILGPN-----NIGLSTPAHWFHS 130
           A +PI GPN      IGLSTPAHWF+S
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of Cla97C08G155325 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 8.8e-47
Identity = 107/148 (72.30%), Postives = 115/148 (77.70%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP+HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNV-QEAQPKD 120
           AAE+L       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA L SN+ QEAQP+D
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FAFEPILGPN-----NIGLSTPAHWFHS 130
           FA EPI GPN      IGLSTPAHWF+S
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of Cla97C08G155325 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 3.4e-46
Identity = 105/147 (71.43%), Postives = 112/147 (76.19%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP+HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 120
           AAESL       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA L SN+QEAQ  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQLHDF 120

Query: 121 AFEPILGPN-----NIGLSTPAHWFHS 130
           A +PI GPN      IGLSTPAHWF+S
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of Cla97C08G155325 vs. NCBI nr
Match: XP_004140854.1 (LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical protein Csa_009713 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 9.8e-46
Identity = 106/151 (70.20%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQE-AQPKD 120
           AAE+L       IEDP+YGCVGI+SQLQ++LHVAETQLAKTRAEIA + SNVQE  QP+D
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAFEPILGPNN-----IGLSTPAHWFHSSLF 133
           FAFEPI GPN+     IGLSTPAH F+S+ F
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNSTFF 151

[Close]

BLAST of Cla97C08G155325 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-23
Identity = 56/116 (48.28%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 5   RRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAES 64
           R   CKYL RRC   C+FSP+FP  +PQ+F  VH IYGA NV     QLP   RAEA ES
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  L-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 108
           L       ++DP+YGCVGI+  L+ Q+   + +LAKT+AEIA+  + + + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]

BLAST of Cla97C08G155325 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-22
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 5   RRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAES 64
           R   CKYL RRC   C+FSP+FP  +PQ+F  VH IYGA NV     QLP   RAEA ES
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  L-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 108
           L       ++DP+YGCVGI+  L+ Q+   + +LAKT+AEIA+  + + +    DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]

BLAST of Cla97C08G155325 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 9   CKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAESL--- 68
           CK L RRC+  C+FSP+FP+  PQ+F  VH ++GASNV     +LP+H R +A  S+   
Sbjct: 17  CKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYE 76

Query: 69  ----IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALL 96
               + DP+YGCVG +S LQ Q+ V + QLA  +AE+  L
Sbjct: 77  ANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of Cla97C08G155325 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 5.3e-18
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 8   TCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAESL-- 67
           +CK L RRC+  CIF+P+FP  +P +F IVH ++GASNV     +LP+H RA+A  SL  
Sbjct: 11  SCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVF 70

Query: 68  -----IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEI 93
                + DP+YGCVG +S LQ Q+   + QLA  +AEI
Sbjct: 71  EANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]

BLAST of Cla97C08G155325 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.4e-16
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 9   CKYLRR-CSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEA------- 68
           CK+LRR C  GCIF+P+FP + P +F  VH I+GASNV     +L  H R +A       
Sbjct: 15  CKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYE 74

Query: 69  AESLIEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIA 94
           AE+ + DP+YGCVG +S LQ Q+H  + +L    A++A
Sbjct: 75  AEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLA 112

[Close]

BLAST of Cla97C08G155325 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.6e-48
Identity = 106/147 (72.11%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC+S CIFSPFFPS NPQRF IVH IYGASNV     QLP+HLR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 120
           AAESL       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA L SN+QEAQP DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 AFEPILGPN-----NIGLSTPAHWFHS 130
           A +PI GPN      IGLSTPAHWF+S
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of Cla97C08G155325 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.3e-47
Identity = 107/148 (72.30%), Postives = 115/148 (77.70%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP+HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNV-QEAQPKD 120
           AAE+L       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA L SN+ QEAQP+D
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FAFEPILGPN-----NIGLSTPAHWFHS 130
           FA EPI GPN      IGLSTPAHWF+S
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of Cla97C08G155325 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.7e-46
Identity = 106/151 (70.20%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQE-AQPKD 120
           AAE+L       IEDP+YGCVGI+SQLQ++LHVAETQLAKTRAEIA + SNVQE  QP+D
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAFEPILGPNN-----IGLSTPAHWFHSSLF 133
           FAFEPI GPN+     IGLSTPAH F+S+ F
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNSTFF 151

[Close]

BLAST of Cla97C08G155325 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45
Identity = 105/152 (69.08%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI GR   CKYL RRC S CIFSPFFPS NPQRF IVH IYGASNV     QLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQP--K 120
           AAE+L       IEDP+YGCVGI+SQLQ+QLHVAETQLAKTRAEIA + SNVQE QP  +
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAFEPILGPNN-----IGLSTPAHWFHSSLF 133
           DFAF+PI GPN+     IGLS+PAH F+SS F
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152

[Close]

BLAST of Cla97C08G155325 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.6e-41
Identity = 100/146 (68.49%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 1   MIYGRRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAE 60
           MI  R   CKYL RRCSS CIFSP+FPS NPQRF IVH IYGASNV     Q+PM LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAESL-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 120
           AAE+L       IEDPIYGCVGI+SQLQY+LHVAETQLAKTRAEIALL SN Q+AQ +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AF-EPILGPNNIGLSTPAHWFHSSLF 133
            F +P  GP   GLSTPAH F   LF
Sbjct: 121 PFDDPSSGPIFTGLSTPAH-FSEQLF 145

[Close]

BLAST of Cla97C08G155325 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 56/116 (48.28%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 5   RRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAES 64
           R   CKYL RRC   C+FSP+FP  +PQ+F  VH IYGA NV     QLP   RAEA ES
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  L-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 108
           L       ++DP+YGCVGI+  L+ Q+   + +LAKT+AEIA+  + + + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]

BLAST of Cla97C08G155325 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 5   RRTTCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAES 64
           R   CKYL RRC   C+FSP+FP  +PQ+F  VH IYGA NV     QLP   RAEA ES
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  L-------IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALLPSNVQEAQPKDF 108
           L       ++DP+YGCVGI+  L+ Q+   + +LAKT+AEIA+  + + +    DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]

BLAST of Cla97C08G155325 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 9   CKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAESL--- 68
           CK L RRC+  C+FSP+FP+  PQ+F  VH ++GASNV     +LP+H R +A  S+   
Sbjct: 17  CKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYE 76

Query: 69  ----IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIALL 96
               + DP+YGCVG +S LQ Q+ V + QLA  +AE+  L
Sbjct: 77  ANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of Cla97C08G155325 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.7e-19
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 8   TCKYL-RRCSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEAAESL-- 67
           +CK L RRC+  CIF+P+FP  +P +F IVH ++GASNV     +LP+H RA+A  SL  
Sbjct: 11  SCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVF 70

Query: 68  -----IEDPIYGCVGILSQLQYQLHVAETQLAKTRAEI 93
                + DP+YGCVG +S LQ Q+   + QLA  +AEI
Sbjct: 71  EANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]

BLAST of Cla97C08G155325 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 9   CKYLRR-CSSGCIFSPFFPSKNPQRFIIVHLIYGASNV-----QLPMHLRAEA------- 68
           CK+LRR C  GCIF+P+FP + P +F  VH I+GASNV     +L  H R +A       
Sbjct: 15  CKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYE 74

Query: 69  AESLIEDPIYGCVGILSQLQYQLHVAETQLAKTRAEIA 94
           AE+ + DP+YGCVG +S LQ Q+H  + +L    A++A
Sbjct: 75  AEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLA 112

The following BLAST results are available for this feature:

BLAST of Cla97C08G155325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923144.1	1.4e-47	72.11	LOB domain-containing protein 24-like [Cucurbita moschata]	[more]
XP_023522202.1	2.3e-47	71.43	LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985104.1	8.8e-47	72.30	LOB domain-containing protein 24-like [Cucurbita maxima]	[more]
KAG7014789.1	3.4e-46	71.43	LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_004140854.1	9.8e-46	70.20	LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical prot...	[more]

BLAST of Cla97C08G155325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59468	4.2e-23	48.28	LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S...	[more]
P59467	2.1e-22	47.41	LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S...	[more]
Q9SHE9	1.8e-18	46.00	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	5.3e-18	47.96	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9FML4	6.4e-16	44.90	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Cla97C08G155325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5I6	6.6e-48	72.11	LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A6J1JCD0	4.3e-47	72.30	LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318...	[more]
A0A0A0L9N7	4.7e-46	70.20	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV...	[more]
A0A1S3AY36	2.3e-45	69.08	LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE...	[more]
A0A0A0LLX6	4.6e-41	68.49	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV...	[more]

BLAST of Cla97C08G155325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26660.1	3.0e-24	48.28	LOB domain-containing protein 24	[more]
AT3G26620.1	1.5e-23	47.41	LOB domain-containing protein 23	[more]
AT1G31320.1	1.3e-19	46.00	LOB domain-containing protein 4	[more]
AT2G30130.1	3.7e-19	47.96	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	4.6e-17	44.90	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..91
None	No IPR available	PANTHER	PTHR31301:SF120	LOB DOMAIN-CONTAINING PROTEIN 23-RELATED	coord: 1..104
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..104
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 8..89 e-value: 8.0E-17 score: 61.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G155325.1	Cla97C08G155325.1	mRNA