Cla97C08G154680 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G154680
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRibosomal RNA small subunit methyltransferase A
LocationCla97Chr08: 22763858 .. 22766033 (-)
RNA-Seq ExpressionCla97C08G154680
SyntenyCla97C08G154680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGCTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATTTCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGTGAAGAGAGAAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGACTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAAAGCGATGATGACTCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTCTGGATGACACTAAGAATAGTATCTTAAGCGCCGTTGGGAACATCAACGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTCTCAAGCTTTCCTTTTGATTGGTGTTGCGTGTTAGTTATTGCTTTTGCCTCCCAAAATATTCTTCTAGTCTTCTTTCTTCTTTCGTAAATAGCGAACTCAATAACTTCGTCCATAACCTGAGTCCTAAGATAGCTTAATTTCATCATTGCCCACAGTCGACTTAGATTGTAAATGTTGGACATCAGTTAACCATATTCCAAAGAAGAAAACCCTTTTATGTAATTTAGTTGCCTCTCATATTCATAGATCCTTATTTTTAGTAAGATGATGCTATTCCCTTTTCTGAATCATGCTCATCGGGAGACATTGTGAAACTTCATCTCTAAGACATATTACTTGATACATTCTCAATAGGAAAATTATGCATTAAAAAGATATCAGCAAATCAAAGAACAACCGAATGATCTTTCCCAAGAAAAGGGTGTCACCAGATCCTTGTTTGCACTTCTTGTGGCAAGCTAGTACAAAATTATGTACATTTATGTGGTGAAATGATGAGCAAGGATCTCTTTAATGCTAGCTACTATTTTGTGTAAGTAAGGAAACTCCGGACATGGAGGAGCCATTAGGTGAAAGTGAATTTTGACCATTCAAACCAATCCAGTACTTCAATCTATTCTTTATCTGTACAACTGAGTAAGCAAATAGGCTTATATTCTCTGATATAGTGACCAAGTGTAGAATGATAGAATCAGAATCAACTTCTTTCGGTGTGGAAACTTCCCATATGCCTTGTCCATACATAGGCTCTAAAACTTAGAGGGACATGTGAGTAGAAAAAAGTACCATGAATATGTAGAATTAATAGAATTCTGTTTGCTTTGGGCCTTTACGACAATATTTAGAGTTTCCTTGTTCTGATTGATTTCGTACTGGCTTCAAATTGTGTGATTGTTCTTCTAGCCAATGTGAATAAATACTAAAATTAGTAACTACATATGTAATTTCCTTTTGGTTGCTTTATATTTGTTTTAAGCTGATTATGTCTGCACTTTTCCATGAACCAGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGTTCTGTTTCAAAGAAGAAAAGAAAACATTTTGTGATCTTTAGCCATTTAAAAAACTGGAAAAAAATTGAAAAATGAAAAAAGAAAAACATTATAAGAATACTATCTATTCTGGCTTCGTTCGATATTACTGCTGAGAAGCAAATTGGATGTTACCAGCGGGTGGAGGTTCTCATCTTTTCAATTCTTTTTGACCATGCTCTTAAGAAGAGAGACTTAAAAAAATATGACCTCGTCTGGGATGAAGCTTTGTTAAAATGGGAATGTAAATACTTTGAGACTCCTTTATAAATATGGAAGGGAGACAGGAGGAAAAAGTTTGAGCCAACCAGTTGGGGTTTGAAGAAAAAGAATATTAAAGAGTTGGAAGTGGAAGTGGAAGTGGAAGTACTTTATTATTCTTTGAAGTTAAGTTAATGTATAAAGTGGGAAGTGTTTAATTAATGTGAAAGTTGCTGTAAATAGTGACTCATTTATGTATGCATAATGTAAAATATCATATGAGTGAGTTTGGTCCATCTAAATGTTGCTGTAAATGGTGGGACCCATTTGTAAAATTTATTGTACATAGTAACACAGTTGTGCAGGCATGTAAATTGTAAATATTTCCATCCCCATTCAATGTAATATTCTTTA

mRNA sequence

ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGCTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATTTCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGTGAAGAGAGAAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGACTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAAAGCGATGATGACTCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTCTGGATGACACTAAGAATAGTATCTTAAGCGCCGTTGGGAACATCAACGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTCTCAAGCTTTCCTTTTGATTGGTGTTGCGTGTTAGTTATTGCTTTTGCCTCCCAAAATATTCTTCTAGTCTTCTTTCTTCTTTCAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGTTCTGTTTCAAAGAAGAAAAGAAAACATTTTGTGATCTTTAGCCATTTAAAAAACTGGAAAAAAATTGAAAAATGAAAAAAGAAAAACATTATAAGAATACTATCTATTCTGGCTTCGTTCGATATTACTGCTGAGAAGCAAATTGGATGTTACCAGCGGGTGGAGGTTCTCATCTTTTCAATTCTTTTTGACCATGCTCTTAAGAAGAGAGACTTAAAAAAATATGACCTCGTCTGGGATGAAGCTTTGTTAAAATGGGAATGTAAATACTTTGAGACTCCTTTATAAATATGGAAGGGAGACAGGAGGAAAAAGTTTGAGCCAACCAGTTGGGGTTTGAAGAAAAAGAATATTAAAGAGTTGGAAGTGGAAGTGGAAGTGGAAGTACTTTATTATTCTTTGAAGTTAAGTTAATGTATAAAGTGGGAAGTGTTTAATTAATGTGAAAGTTGCTGTAAATAGTGACTCATTTATGTATGCATAATGTAAAATATCATATGAGTGAGTTTGGTCCATCTAAATGTTGCTGTAAATGGTGGGACCCATTTGTAAAATTTATTGTACATAGTAACACAGTTGTGCAGGCATGTAAATTGTAAATATTTCCATCCCCATTCAATGTAATATTCTTTA

Coding sequence (CDS)

ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGCTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATTTCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGTGAAGAGAGAAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGACTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAAAGCGATGATGACTCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTCTGGATGACACTAAGAATAGTATCTTAAGCGCCGTTGGGAACATCAACGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTCTCAAGCTTTCCTTTTGATTGGTGTTGCGTGTTAGTTATTGCTTTTGCCTCCCAAAATATTCTTCTAGTCTTCTTTCTTCTTTCAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGTTCTGTTTCAAAGAAGAAAAGAAAACATTTTGTGATCTTTAG

Protein sequence

MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSFAVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAGKSCFFSSFPFDWCCVLVIAFASQNILLVFFLLSEQEIYGTVAVLSSELLMFCFKEEKKTFCDL
Homology
[Close]
BLAST of Cla97C08G154680 vs. NCBI nr
Match: KAA0065096.1 (Ribosomal RNA small subunit methyltransferase A [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 2.9e-87
Identity = 159/163 (97.55%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAGKSCFFSS 164
           AVLVPCYGRIYNDF+D+TKNSILSAVGNINDSFSAGKSCFFSS
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAGKSCFFSS 163

[Close]
BLAST of Cla97C08G154680 vs. NCBI nr
Match: XP_038886443.1 (uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886445.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886446.1 uncharacterized protein LOC120076637 [Benincasa hispida])

HSP 1 Score: 316.6 bits (810), Expect = 1.7e-82
Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSA 156
           AVLVPCYGRIYNDF+D+TKNSILSAVGNINDSFSA
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSA 155

[Close]
BLAST of Cla97C08G154680 vs. NCBI nr
Match: XP_004152600.1 (uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736757.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736758.1 uncharacterized protein LOC101213956 [Cucumis sativus] >KGN62990.2 hypothetical protein Csa_022594 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 2.8e-82
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSA 156
           AVLVPCYGRIYNDF+D+TKNSILSAVGNINDSFSA
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSA 155

[Close]
BLAST of Cla97C08G154680 vs. NCBI nr
Match: XP_008444920.1 (PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_016900065.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo])

HSP 1 Score: 315.8 bits (808), Expect = 2.8e-82
Identity = 150/155 (96.77%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSA 156
           AVLVPCYGRIYNDF+D+TKNSILSA+GNINDSFSA
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSA 155

[Close]
BLAST of Cla97C08G154680 vs. NCBI nr
Match: KAG7020253.1 (hypothetical protein SDJN02_16936, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.3 bits (778), Expect = 8.5e-79
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWW WSGKHKEPR+SN GSA NASLDT  RE DTLKFPL NGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSN-GSAFNASLDTVIREPDTLKFPLANGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           +RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD++DNSF
Sbjct: 61  RRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAGKSCFF 162
           AVLVPCYGR+YNDF+D+TKNSILSA GNINDSFSAGKSCFF
Sbjct: 121 AVLVPCYGRVYNDFVDETKNSILSASGNINDSFSAGKSCFF 160

[Close]
BLAST of Cla97C08G154680 vs. ExPASy TrEMBL
Match: A0A0A0LLD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370490 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 171/206 (83.01%), Postives = 177/206 (85.92%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAGKSCFFSSFPFDWCCVLVIAFASQN 180
           AVLVPCYGRIYNDF+D+TKNSILSAVGNINDSFSA           D+ C      +  N
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAA----------DYVCT-----SPWN 180

Query: 181 ILLVFFLLSEQEIYGTVAVLSSELLM 207
                    EQEIYGTVAVLSSELLM
Sbjct: 181 --------REQEIYGTVAVLSSELLM 183

[Close]
BLAST of Cla97C08G154680 vs. ExPASy TrEMBL
Match: A0A5A7VFJ3 (Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004290 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.4e-87
Identity = 159/163 (97.55%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAGKSCFFSS 164
           AVLVPCYGRIYNDF+D+TKNSILSAVGNINDSFSAGKSCFFSS
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAGKSCFFSS 163

[Close]
BLAST of Cla97C08G154680 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.4e-82
Identity = 150/155 (96.77%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSA 156
           AVLVPCYGRIYNDF+D+TKNSILSA+GNINDSFSA
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSA 155

[Close]
BLAST of Cla97C08G154680 vs. ExPASy TrEMBL
Match: A0A6J1BRV5 (uncharacterized protein LOC111005141 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005141 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.2e-79
Identity = 159/207 (76.81%), Postives = 168/207 (81.16%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           M+VAFPQLSWWLWSGK+KEPRSSN GS LNASLDTA RE DTLKFPLVNGANISSSSRRV
Sbjct: 1   MAVAFPQLSWWLWSGKNKEPRSSN-GSPLNASLDTAIREPDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEP+GPGFQSDDD DNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPNGPGFQSDDDPDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAG-KSCFFSSFPFDWCCVLVIAFASQ 180
           AVLVPCYG +YNDF+D+TKNSILSAVGNINDSFSA    C F+                 
Sbjct: 121 AVLVPCYGHMYNDFVDETKNSILSAVGNINDSFSAADNGCTFAR---------------- 180

Query: 181 NILLVFFLLSEQEIYGTVAVLSSELLM 207
                     +QEIYGT+AVLS ELLM
Sbjct: 181 --------SRQQEIYGTMAVLSPELLM 182

[Close]
BLAST of Cla97C08G154680 vs. ExPASy TrEMBL
Match: A0A6J1KDE3 (uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77
Identity = 145/158 (91.77%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAGKS 159
           AVLVPCY RIYNDF+D+TK S+LSAVGNI+DSFS  +S
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAES 158

[Close]
BLAST of Cla97C08G154680 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 0 

Query: 1   MSVAFPQLSWWLWSG---KHKEPRSS--NGGSALNASLDTANRETDTLKFPLVNGANISS 60
           M+V+FP+L  WL  G   K +E + S   G S+L+ SL    ++T T K       + SS
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPSL----KKTTTSK-----TGSSSS 60

Query: 61  SSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDD 120
           S ++ KR W  R       E D +      G V   E DD +WSIGW EPHGPGF+++DD
Sbjct: 61  SVKKTKRGWIGRGGSGSGGEEDKI------GNVVFPEPDDPEWSIGWVEPHGPGFKAEDD 120

Query: 121 SDNSFAVLVPCYGRIYNDFLDDTKNSILS 145
               F VLVP Y ++ +   +   N   S
Sbjct: 121 DCGGFVVLVPLYKKVMDGSGNQIPNGFFS 134

[Close]
BLAST of Cla97C08G154680 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 0 

Query: 38  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSD 97
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 98  WSIGWSEPHGPGFQSDDD-SDNSFAVLVPCYGRIYNDFLDDTKNSILSAVGNINDSFSAG 157
           WS+GW+EPHGP FQSDD+ +D  F VLVPCY R   +   +  N +LSAV N+ +    G
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNLPNGLPPG 121

[Close]
BLAST of Cla97C08G154680 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 43/113 (38.05%), Postives = 58/113 (51.33%), Query Frame = 0 

Query: 38  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSD 97
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 98  WSIGWSEPHGPGFQSDDD-SDNSFAVLVPCYGRIYNDFLDDTKNSILSAVGNI 150
           WS+GW+EPHGP FQSDD+ +D  F VLVPCY R   +   +  N +LSAV N+
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNL 114

The following BLAST results are available for this feature:
BLAST of Cla97C08G154680 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065096.12.9e-8797.55Ribosomal RNA small subunit methyltransferase A [Cucumis melo var. makuwa][more]
XP_038886443.11.7e-8298.06uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 unchara... [more]
XP_004152600.12.8e-8297.42uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharact... [more]
XP_008444920.12.8e-8296.77PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 P... [more]
KAG7020253.18.5e-7990.68hypothetical protein SDJN02_16936, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cla97C08G154680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C08G154680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLD01.1e-8783.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370490 PE=4 SV=1[more]
A0A5A7VFJ31.4e-8797.55Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3BB051.4e-8296.77uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=... [more]
A0A6J1BRV59.2e-7976.81uncharacterized protein LOC111005141 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1KDE31.3e-7791.77uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Cla97C08G154680 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65480.12.7e-1436.91unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G38060.16.2e-1136.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G38060.21.1e-1038.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34464OS09G0376300 PROTEINcoord: 1..159
NoneNo IPR availablePANTHERPTHR34464:SF5SUBFAMILY NOT NAMEDcoord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G154680.2Cla97C08G154680.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity