Cla97C08G150200 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G150200
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr08: 18644768 .. 18645123 (-)
RNA-Seq ExpressionCla97C08G150200
SyntenyCla97C08G150200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCCATCTCCACCATCTTGTCTTTTCTCTCGTCTTCTCTATCCTTTTTATCTGATCCTTGGCCTGAGGCATTCTATGGTCTCCCTCTCCAAAACTCCGCACAGCCATCGCTCCTCGGGTATGCTATTTTCCACACAGATACTCCAATTGCGTTATAATTTGCATAACACAAATCAAACTGTTTAAGTCTTCTACAAAGTTTGCTCAAGTTTTCTGTTGAAGATGAAGACAGGGCAGATAAGTAATGGTAAGTTCATACTTCCCTTCTGCTAATCATTTGCACTTGTGGTATTGTGGTACACTGAAGTTCTATTCCAAAATGAGAGATCCAAAGATTGTAAATGTAATATAA

mRNA sequence

ATGGCACCCATCTCCACCATCTTGTCTTTTCTCTCGTCTTCTCTATCCTTTTTATCTGATCCTTGGCCTGAGGCATTCTATGGTCTCCCTCTCCAAAACTCCGCACAGCCATCGCTCCTCGGGTATGCTATTTTCCACACAGATACTCCAATTGCTTCATACTTCCCTTCTGCTAATCATTTGCACTTGTGGTATTGTGGTACACTGAAGTTCTATTCCAAAATGAGAGATCCAAAGATTGTAAATGTAATATAA

Coding sequence (CDS)

ATGGCACCCATCTCCACCATCTTGTCTTTTCTCTCGTCTTCTCTATCCTTTTTATCTGATCCTTGGCCTGAGGCATTCTATGGTCTCCCTCTCCAAAACTCCGCACAGCCATCGCTCCTCGGGTATGCTATTTTCCACACAGATACTCCAATTGCTTCATACTTCCCTTCTGCTAATCATTTGCACTTGTGGTATTGTGGTACACTGAAGTTCTATTCCAAAATGAGAGATCCAAAGATTGTAAATGTAATATAA

Protein sequence

MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAIFHTDTPIASYFPSANHLHLWYCGTLKFYSKMRDPKIVNVI
Homology
[Close]
BLAST of Cla97C08G150200 vs. NCBI nr
Match: KGN47818.1 (hypothetical protein Csa_004141 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-15
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 1  MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAIFHTDTPI 52
          MAPISTILSFL SSLSFLSDPWPEAFYGLPL++SAQ SL+GYAIFHTDT I
Sbjct: 25 MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGYAIFHTDTAI 75

[Close]
BLAST of Cla97C08G150200 vs. NCBI nr
Match: KAA0036462.1 (hypothetical protein E6C27_scaffold147G00310 [Cucumis melo var. makuwa] >TYK00026.1 hypothetical protein E5676_scaffold360G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 3.2e-10
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAI 45
          MAPISTILSFL SSLSFLSDPWPEAFYGLPL++SAQ SL+G+ +
Sbjct: 1  MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGFLL 44

[Close]
BLAST of Cla97C08G150200 vs. ExPASy TrEMBL
Match: A0A0A0KE34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405315 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 1  MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAIFHTDTPI 52
          MAPISTILSFL SSLSFLSDPWPEAFYGLPL++SAQ SL+GYAIFHTDT I
Sbjct: 25 MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGYAIFHTDTAI 75

[Close]
BLAST of Cla97C08G150200 vs. ExPASy TrEMBL
Match: A0A5D3BP26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00710 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAI 45
          MAPISTILSFL SSLSFLSDPWPEAFYGLPL++SAQ SL+G+ +
Sbjct: 1  MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGFLL 44

The following BLAST results are available for this feature:
BLAST of Cla97C08G150200 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47818.12.6e-1588.24hypothetical protein Csa_004141 [Cucumis sativus][more]
KAA0036462.13.2e-1081.82hypothetical protein E6C27_scaffold147G00310 [Cucumis melo var. makuwa] >TYK0002... [more]
BLAST of Cla97C08G150200 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C08G150200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE341.2e-1588.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405315 PE=4 SV=1[more]
A0A5D3BP261.6e-1081.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cla97C08G150200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G150200.2Cla97C08G150200.2mRNA