Cla97C08G149550 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G149550
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr08: 17932499 .. 17932840 (+)
RNA-Seq ExpressionCla97C08G149550
SyntenyCla97C08G149550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTCTTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTCTAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCGCCTCCATTCTAG

mRNA sequence

ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTCTTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTCTAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCGCCTCCATTCTAG

Coding sequence (CDS)

ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTCTTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTCTAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCGCCTCCATTCTAG

Protein sequence

MAAAWAAYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF
Homology
BLAST of Cla97C08G149550 vs. NCBI nr
Match: KAA0054910.1 (hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa] >TYK22698.1 hypothetical protein E5676_scaffold1163G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 6.9e-16
Identity = 65/112 (58.04%), Postives = 73/112 (65.18%), Query Frame = 0

Query: 6   AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSH--DGSPPPWP 65
           AA+LVF IL VA IS SSP RA A   Y YR S  PLPPLH++IIL FSH    SP  W 
Sbjct: 2   AAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW- 61

Query: 66  PSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
            +N S  K  R + A+RKY C KE EK+ K P  SQEPWP CP+PA  PPPF
Sbjct: 62  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 112

BLAST of Cla97C08G149550 vs. NCBI nr
Match: KAA0054906.1 (hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22694.1 hypothetical protein E5676_scaffold1163G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-08
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0

Query: 7   AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKS 66
           AYL   I +A +S  SPS  S +A     H  P  PPL R ++  +   S P  P + + 
Sbjct: 6   AYLFLAIFLAMVS-FSPSSLSISATAIPSHGIPYPPPLPRSLLFHNDHSSLPQSPAAEEY 65

Query: 67  PLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
           P KP +R+N +RK KC +     +K  + S++PWP+CP+  SPPPPF
Sbjct: 66  PAKPLQRVNGERKDKCTEAPRNGNKDAKSSKDPWPKCPVSKSPPPPF 111

BLAST of Cla97C08G149550 vs. NCBI nr
Match: KAE8646677.1 (hypothetical protein Csa_023590, partial [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 22  SPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYK 81
           SPS  S AA  A  +  P  PPL R ++  +   S PP P + + P K  RR+N +RK K
Sbjct: 4   SPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAEEYPAKSPRRVNGERKDK 63

Query: 82  CPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
           C +     +K  + +++PWP+CP+P SPPPPF
Sbjct: 64  CSEAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 95

BLAST of Cla97C08G149550 vs. ExPASy TrEMBL
Match: A0A0A0KCN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058710 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 66/110 (60.00%), Postives = 74/110 (67.27%), Query Frame = 0

Query: 6   AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSHDGSPPPWPPS 65
           AA+ VF IL VA ISP+SP RASA   Y Y  SS PL PLH  IIL FSH  SP PW  S
Sbjct: 2   AAHFVFAILVVAVISPTSPWRASADERYDYLLSSSPLLPLHHPIILFFSHHVSPSPWSWS 61

Query: 66  NKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
           N+S  K  R +N +RKY C KE EK+ K P  SQ+PWP CP+PA PPPPF
Sbjct: 62  NRSSRKLLRHINPERKYNCLKEPEKQFKDPVSSQKPWPRCPMPAFPPPPF 111

BLAST of Cla97C08G149550 vs. ExPASy TrEMBL
Match: A0A5A7UHY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00150 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.3e-16
Identity = 65/112 (58.04%), Postives = 73/112 (65.18%), Query Frame = 0

Query: 6   AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSH--DGSPPPWP 65
           AA+LVF IL VA IS SSP RA A   Y YR S  PLPPLH++IIL FSH    SP  W 
Sbjct: 2   AAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW- 61

Query: 66  PSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
            +N S  K  R + A+RKY C KE EK+ K P  SQEPWP CP+PA  PPPF
Sbjct: 62  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 112

BLAST of Cla97C08G149550 vs. ExPASy TrEMBL
Match: A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.0e-09
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 7   AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKS 66
           AYL   IL+A ++  SPS  S AA  A  +  P  PPL R ++  +   S PP P + + 
Sbjct: 6   AYLFLAILLA-VASFSPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAEEY 65

Query: 67  PLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
           P K  RR+N +RK KC +     +K  + +++PWP+CP+P SPPPPF
Sbjct: 66  PAKSPRRVNGERKDKCSEAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 111

BLAST of Cla97C08G149550 vs. ExPASy TrEMBL
Match: A0A5D3DGG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00110 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.0e-08
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0

Query: 7   AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKS 66
           AYL   I +A +S  SPS  S +A     H  P  PPL R ++  +   S P  P + + 
Sbjct: 6   AYLFLAIFLAMVS-FSPSSLSISATAIPSHGIPYPPPLPRSLLFHNDHSSLPQSPAAEEY 65

Query: 67  PLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF 114
           P KP +R+N +RK KC +     +K  + S++PWP+CP+  SPPPPF
Sbjct: 66  PAKPLQRVNGERKDKCTEAPRNGNKDAKSSKDPWPKCPVSKSPPPPF 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054910.16.9e-1658.04hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa] >TYK22... [more]
KAA0054906.14.1e-0839.25hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22... [more]
KAE8646677.11.5e-0741.30hypothetical protein Csa_023590, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCN71.5e-1960.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058710 PE=4 SV=1[more]
A0A5A7UHY53.3e-1658.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KEF94.0e-0941.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1[more]
A0A5D3DGG92.0e-0839.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G149550.1Cla97C08G149550.1mRNA