Cla97C08G149380 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G149380
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr08: 17738672 .. 17739043 (+)
RNA-Seq ExpressionCla97C08G149380
SyntenyCla97C08G149380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGTTCACCAAAGTCCCGAAAGCGAAAGATGAAGAAGCCGCCACAGCCGCCGAGAGCCGCCAAAGCCCGGCCAAAGACGATTGAAGTGGACGAAGAACATGATTCCTTAGATTTTGGATACATAGTCCAACAACTCCTCACCGGCGATGGCAGCGAATCCATCTCCGACCACCCTTCTAGTTCTACATCTTCCAATCGTCGGGAAGAATCTGTGCCAGTGGGGAGCCTGTCCGAGCCCCATTTCTCTGCCGCCGGTTTCTCCAAACGCTTTCACATCGCGGCCGCTGCCACCGTCGCCAGAAGAAGATCTGAGTATTTACGATTATGGCGGTTGGGAAGAGCCGGCAGCGCCATACCCTTTTCTTAA

mRNA sequence

ATGATGAGTTCACCAAAGTCCCGAAAGCGAAAGATGAAGAAGCCGCCACAGCCGCCGAGAGCCGCCAAAGCCCGGCCAAAGACGATTGAAGTGGACGAAGAACATGATTCCTTAGATTTTGGATACATAGTCCAACAACTCCTCACCGGCGATGGCAGCGAATCCATCTCCGACCACCCTTCTAGTTCTACATCTTCCAATCGTCGGGAAGAATCTGTGCCAGTGGGGAGCCTGTCCGAGCCCCATTTCTCTGCCGCCGGTTTCTCCAAACGCTTTCACATCGCGGCCGCTGCCACCGTCGCCAGAAGAAGATCTGAGTATTTACGATTATGGCGGTTGGGAAGAGCCGGCAGCGCCATACCCTTTTCTTAA

Coding sequence (CDS)

ATGATGAGTTCACCAAAGTCCCGAAAGCGAAAGATGAAGAAGCCGCCACAGCCGCCGAGAGCCGCCAAAGCCCGGCCAAAGACGATTGAAGTGGACGAAGAACATGATTCCTTAGATTTTGGATACATAGTCCAACAACTCCTCACCGGCGATGGCAGCGAATCCATCTCCGACCACCCTTCTAGTTCTACATCTTCCAATCGTCGGGAAGAATCTGTGCCAGTGGGGAGCCTGTCCGAGCCCCATTTCTCTGCCGCCGGTTTCTCCAAACGCTTTCACATCGCGGCCGCTGCCACCGTCGCCAGAAGAAGATCTGAGTATTTACGATTATGGCGGTTGGGAAGAGCCGGCAGCGCCATACCCTTTTCTTAA

Protein sequence

MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSESISDHPSSSTSSNRREESVPVGSLSEPHFSAAGFSKRFHIAAAATVARRRSEYLRLWRLGRAGSAIPFS
Homology
[Close]
BLAST of Cla97C08G149380 vs. NCBI nr
Match: KAE8647158.1 (hypothetical protein Csa_018821 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-10
Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 0 

Query: 1  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSE--SISD 60
          M++SPKSRKRK+K PPQPPRA +A  KTIEV+E      FGY+V+QLL G GS   SI+D
Sbjct: 1  MLNSPKSRKRKLKTPPQPPRATRA--KTIEVEEPD---GFGYMVEQLLFGSGSSGGSITD 60

Query: 61 HPSSSTSSNRREESVPVGSLS 80
          HPSSS S+  R+E VP+G LS
Sbjct: 61 HPSSS-SNTPRDEYVPMGILS 75

[Close]
BLAST of Cla97C08G149380 vs. NCBI nr
Match: KAA0058917.1 (hypothetical protein E6C27_scaffold98G00860 [Cucumis melo var. makuwa] >TYK23713.1 hypothetical protein E5676_scaffold1607G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 7.5e-08
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0 

Query: 1  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGS-ESISDH 60
          M++ PKSRKRK+K+ PQPPR  KA  KTIEV EE D L  GY+V+Q LTG GS  SI DH
Sbjct: 1  MVNPPKSRKRKLKRSPQPPRPTKA--KTIEV-EEPDGL--GYMVEQFLTGSGSGGSIPDH 60

Query: 61 PSSSTSSNRREESVPVGSLS 80
            SS+S +R ++ VP+G LS
Sbjct: 61 YPSSSSDDREDQYVPMGILS 75

[Close]
BLAST of Cla97C08G149380 vs. ExPASy TrEMBL
Match: A0A0A0KF90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338060 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10
Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 0 

Query: 1  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSE--SISD 60
          M++SPKSRKRK+K PPQPPRA +A  KTIEV+E      FGY+V+QLL G GS   SI+D
Sbjct: 1  MLNSPKSRKRKLKTPPQPPRATRA--KTIEVEEPD---GFGYMVEQLLFGSGSSGGSITD 60

Query: 61 HPSSSTSSNRREESVPVGSLS 80
          HPSSS S+  R+E VP+G LS
Sbjct: 61 HPSSS-SNTPRDEYVPMGILS 75

[Close]
BLAST of Cla97C08G149380 vs. ExPASy TrEMBL
Match: A0A5D3DJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00240 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.7e-08
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0 

Query: 1  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGS-ESISDH 60
          M++ PKSRKRK+K+ PQPPR  KA  KTIEV EE D L  GY+V+Q LTG GS  SI DH
Sbjct: 1  MVNPPKSRKRKLKRSPQPPRPTKA--KTIEV-EEPDGL--GYMVEQFLTGSGSGGSIPDH 60

Query: 61 PSSSTSSNRREESVPVGSLS 80
            SS+S +R ++ VP+G LS
Sbjct: 61 YPSSSSDDREDQYVPMGILS 75

The following BLAST results are available for this feature:
BLAST of Cla97C08G149380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647158.14.7e-1061.73hypothetical protein Csa_018821 [Cucumis sativus][more]
KAA0058917.17.5e-0858.75hypothetical protein E6C27_scaffold98G00860 [Cucumis melo var. makuwa] >TYK23713... [more]
BLAST of Cla97C08G149380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C08G149380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF902.3e-1061.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338060 PE=4 SV=1[more]
A0A5D3DJD13.7e-0858.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cla97C08G149380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G149380.1Cla97C08G149380.1mRNA