Cla97C08G149350 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C08G149350
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	dormancy-associated protein 2-like isoform X2
Location	Cla97Chr08: 17715627 .. 17716940 (+)
RNA-Seq Expression	Cla97C08G149350
Synteny	Cla97C08G149350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACTCTAAGGCTGCCGGAGTCATGGCCATGGCCGCGTTCCTTGCCCTCTTCCTCCTCATATCCACCGGCAACGTGGCGGCCGCTCTGCCCTATCAGTCGATGTTACCACAACAATTTGGACTTGGTCAGTATGATTTACACCCTAAACCTTTTAAGTTGATTGTATTGTTGTTTAATTTTTTAACTTTAAAAAAAATTTCGGCTCAATTTAAATTTAACATTTTAAAGTTAAGTATCTTCTATTCTTTTTTTCTTTAAATGGAGTTTTTGGCATGTTATATAACAAACACAAGTTAAATAATTTATATAATACCTTGATGAATAAGATATATACGAATATTTAATAATTACCATCTCAATAGGCAATAGTTTGAACCCAGTTTTGTAGTCAAATAATTAAATTGAATGAAAGTCATGTCAATATTCCCAATTTGTTATTATCCTTTATTCTATGTTCTTATCTTGATTTCTTCGTGGTTAAATTATAAATTGAATCCACAAACTTTTATAATTGTGGCTAATAAATCTAGAAATTTTAAAAAGTATTTAATAGCTTGTTAGAACTTTCAATTTTCTTTCTAATAGGTCTTTGAACTTAAAAATATAAAATAAATCCTTATACTTTTAATTTTTTTCCAAACATATTCAACCTATCTTAAAATTAACGAATTTATTAGACATAAAATTAAATTTTGATTTTTTTTATAATAATTCATTAAGTTGATGTTAACGTATTAAAACAACTCAATTTCAATGGTAAACACTATTGAAGTTCGTACATTTATCAAAAAATTAAACTTCATCTTGTAATTATGCACCCCAAACACATATTTCTTAAATCTCCAACATATTAGTTTTTAAATTCATAATTCGACTCGATGCTCCAAACACCCCAAAATTTTTTATTTTTTTATTCAATAGTTTAGCAAACTTTAGAAAATGTCAAATAAGTCAAACGTCTACTAAACACACAAATTAACGAAAGTTACTTTATTAGATGCTATAATTGAATGTGTGAAGACTTAATAGAAAGTTCAAAGTTACTTCATTTTACAAAAGTGATTAGTTTGATGTTTGTTTTAATCAGGACGAAAGGTTCTTGAAGAGAAATATGAACCCAACGGTAGAAGTGGATATAACAAATATGAACCCAACGGCAGAAGTGGATATAACAAATATGAACCCAACGGCAGAAGTGGATATAACAAATATGAACCCGATGGCAGAAGTGGATATAACAAATATGAACCCAATGGCAGAAGTGGCTACAATGGCAACAAGCCCACGGGAAGGGGAGGATATAATTAA

mRNA sequence

ATGGCGAACTCTAAGGCTGCCGGAGTCATGGCCATGGCCGCGTTCCTTGCCCTCTTCCTCCTCATATCCACCGGCAACGTGGCGGCCGCTCTGCCCTATCAGTCGATGTTACCACAACAATTTGGACTTGGACGAAAGGTTCTTGAAGAGAAATATGAACCCAACGGTAGAAGTGGATATAACAAATATGAACCCAACGGCAGAAGTGGATATAACAAATATGAACCCAACGGCAGAAGTGGATATAACAAATATGAACCCGATGGCAGAAGTGGATATAACAAATATGAACCCAATGGCAGAAGTGGCTACAATGGCAACAAGCCCACGGGAAGGGGAGGATATAATTAA

Coding sequence (CDS)

ATGGCGAACTCTAAGGCTGCCGGAGTCATGGCCATGGCCGCGTTCCTTGCCCTCTTCCTCCTCATATCCACCGGCAACGTGGCGGCCGCTCTGCCCTATCAGTCGATGTTACCACAACAATTTGGACTTGGACGAAAGGTTCTTGAAGAGAAATATGAACCCAACGGTAGAAGTGGATATAACAAATATGAACCCAACGGCAGAAGTGGATATAACAAATATGAACCCAACGGCAGAAGTGGATATAACAAATATGAACCCGATGGCAGAAGTGGATATAACAAATATGAACCCAATGGCAGAAGTGGCTACAATGGCAACAAGCCCACGGGAAGGGGAGGATATAATTAA

Protein sequence

MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGYNKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN

Homology

[Close]

BLAST of Cla97C08G149350 vs. NCBI nr
Match: XP_022993935.1 (P granule abnormality protein 1-like [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 7.0e-40
Identity = 94/127 (74.02%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLISTG VAAAL Y+S++PQ+F LGRKVLE+KYE NGRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISTGTVAAALSYESIIPQEFALGRKVLEDKYEANGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPD-----------GRSGYNKYEPNGRSGYNGNKP 117
           N  EP GR GYN YEPNGRSGYN  EPD           GRSGYN +EPNGRSGYNG KP
Sbjct: 61  NSNEPKGRGGYNSYEPNGRSGYNSNEPDGRGGYNSNEPNGRSGYNSHEPNGRSGYNGYKP 120

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BLAST of Cla97C08G149350 vs. NCBI nr
Match: KAG7016430.1 (hypothetical protein SDJN02_21539, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 92/127 (72.44%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKY-------- 60
           MA+SKAAGVM MAAFLA+FLLISTGNV AAL Y+S++PQ+F LG KVLE+KY        
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISTGNVVAALSYESIVPQEFALGPKVLEDKYEANGRSGY 60

Query: 61  ---EPNGRSGYNKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKP 117
              EPNGRSGYN  EPNGRSGYN  EPNGRSGYN  EP+GRSGYN YEPNGRSGYN N+P
Sbjct: 61  NSNEPNGRSGYNSNEPNGRSGYNSNEPNGRSGYNSNEPNGRSGYNSYEPNGRSGYNSNEP 120

[Close]

BLAST of Cla97C08G149350 vs. NCBI nr
Match: KAG6578909.1 (hypothetical protein SDJN03_23357, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.7 bits (426), Expect = 3.0e-38
Identity = 89/116 (76.72%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLISTGNV AAL Y+S++PQ+F LGRKVLE+KYE NGRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISTGNVVAALSYESIVPQEFALGRKVLEDKYEANGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN 117
           N  EPNGRSGYN  E NGRSGYN  EP+GRSGYN  E NGRSGYN N+P GR GYN
Sbjct: 61  NSNEPNGRSGYNSNESNGRSGYNSNEPNGRSGYNSNESNGRSGYNSNEPNGRSGYN 116

[Close]

BLAST of Cla97C08G149350 vs. NCBI nr
Match: XP_023551561.1 (N66 matrix protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 6.6e-38
Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLIS GNV AAL Y+S++PQ+F LGRKVLE+KYE NGRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISAGNVVAALSYESIVPQEFALGRKVLEDKYEANGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN 117
           N  EPNGRSGYN  E NGRSGYN  EP+GR GYN  EPNGRSGYN N+P GR GYN
Sbjct: 61  NNNEPNGRSGYNSNESNGRSGYNNKEPNGRIGYNSKEPNGRSGYNNNEPNGRSGYN 116

[Close]

BLAST of Cla97C08G149350 vs. NCBI nr
Match: XP_022939479.1 (dormancy-associated protein 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 165.2 bits (417), Expect = 3.3e-37
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLIS GNV AAL Y+S++PQ+F LGRKVLE+KYE  GRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISAGNVVAALSYESIVPQEFALGRKVLEDKYEAIGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN 117
           N  EPNGRSGYN  EPNGRSGYN +EP+GRSGYN  E NGRSGYN ++P GR GYN
Sbjct: 61  NSNEPNGRSGYNSNEPNGRSGYNSHEPNGRSGYNSNELNGRSGYNSHEPNGRSGYN 116

[Close]

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL
Match: A0A6J1JZW6 (P granule abnormality protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489785 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.4e-40
Identity = 94/127 (74.02%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLISTG VAAAL Y+S++PQ+F LGRKVLE+KYE NGRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISTGTVAAALSYESIIPQEFALGRKVLEDKYEANGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPD-----------GRSGYNKYEPNGRSGYNGNKP 117
           N  EP GR GYN YEPNGRSGYN  EPD           GRSGYN +EPNGRSGYNG KP
Sbjct: 61  NSNEPKGRGGYNSYEPNGRSGYNSNEPDGRGGYNSNEPNGRSGYNSHEPNGRSGYNGYKP 120

[Close]

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL
Match: A0A6J1FHA4 (dormancy-associated protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445371 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLIS GNV AAL Y+S++PQ+F LGRKVLE+KYE  GRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISAGNVVAALSYESIVPQEFALGRKVLEDKYEAIGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN 117
           N  EPNGRSGYN  EPNGRSGYN +EP+GRSGYN  E NGRSGYN ++P GR GYN
Sbjct: 61  NSNEPNGRSGYNSNEPNGRSGYNSHEPNGRSGYNSNELNGRSGYNSHEPNGRSGYN 116

[Close]

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL
Match: A0A6J1FLR8 (N66 matrix protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445371 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.7e-36
Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 1   MANSKAAGVMAMAAFLALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGY 60
           MA+SKAAGVM MAAFLA+FLLIS GNV AAL Y+S++PQ+F LGRKVLE+KYE  GRSGY
Sbjct: 1   MASSKAAGVMPMAAFLAVFLLISAGNVVAALSYESIVPQEFALGRKVLEDKYEAIGRSGY 60

Query: 61  NKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN 117
           N  +PNGRSG N  EPNGRS YN  EP+GRSGYN  EPNGRSGYN ++P GR GYN
Sbjct: 61  NSNKPNGRSGNNSNEPNGRSRYNSNEPNGRSGYNSNEPNGRSGYNSHEPNGRSGYN 116

[Close]

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL
Match: A0A0E0JUX0 (Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-13
Identity = 42/61 (68.85%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 56  GRSGYNKYEPNGRSGYNKYEPNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGY 115
           GRSGYN   PNGRSGYN   P+GRSGYN   P+GRSGYN   PNGRSGYN   P GR GY
Sbjct: 32  GRSGYNSVNPNGRSGYNSVNPDGRSGYNSVNPNGRSGYNSVNPNGRSGYNSVDPNGRSGY 91

Query: 116 N 117
           N
Sbjct: 92  N 92

[Close]

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL
Match: A0A0D9YLK2 (Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-13
Identity = 52/101 (51.49%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 16  LALFLLISTGNVAAALPYQSMLPQQFGLGRKVLEEKYEPNGRSGYNKYEPNGRSGYNKYE 75
           L L LL+    VAA L   + +  + G G         P+GRSGYN   P+GRSGYN   
Sbjct: 10  LCLMLLL----VAALLCTMNTISVEAGRGG---YNSVNPDGRSGYNSVNPDGRSGYNSVN 69

Query: 76  PNGRSGYNKYEPDGRSGYNKYEPNGRSGYNGNKPTGRGGYN 117
           P+GRSGYN   PDGRSGYN   PNGR GYN   P GR GYN
Sbjct: 70  PDGRSGYNSVNPDGRSGYNSVNPNGRGGYNSVNPNGRSGYN 103

The following BLAST results are available for this feature:

BLAST of Cla97C08G149350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993935.1	7.0e-40	74.02	P granule abnormality protein 1-like [Cucurbita maxima]	[more]
KAG7016430.1	1.0e-38	72.44	hypothetical protein SDJN02_21539, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6578909.1	3.0e-38	76.72	hypothetical protein SDJN03_23357, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023551561.1	6.6e-38	75.86	N66 matrix protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939479.1	3.3e-37	75.00	dormancy-associated protein 2-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Cla97C08G149350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZW6	3.4e-40	74.02	P granule abnormality protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489785...	[more]
A0A6J1FHA4	1.6e-37	75.00	dormancy-associated protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FLR8	8.7e-36	73.28	N66 matrix protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445371...	[more]
A0A0E0JUX0	3.6e-13	68.85	Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1	[more]
A0A0D9YLK2	3.6e-13	51.49	Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1	[more]

BLAST of Cla97C08G149350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G149350.1	Cla97C08G149350.1	mRNA