Cla97C08G148185 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G148185
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionReverse transcriptase domain-containing protein
LocationCla97Chr08: 15765680 .. 15768619 (-)
RNA-Seq ExpressionCla97C08G148185
SyntenyCla97C08G148185
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAACCATATGATCGGGTGGAAGGGAGATTTTTGGAAGTCATAATGTTGAAGATGGGTTTCCATCCGATGTGGGTGGAGCGTCTAGTGGATTGTGTGACTATAGTGAGCTTCTATGTGTTCATTAATGGAAATCCCTCGTTTTTTTTTTACCCACATCGTGGGCTGAGGCAAGGAGATCCCTTGTCCCTGTACCTGTTTATTTTATGTGCTCAAAGTTTGTCTTTTCTATTTAGTGCTTAGAGGATGTGTAGAAATCTTATTGGTTGCAAAATTGCAAGAAATTGTTCAAGTATTTCCCATTTATTTTTCATTGATGATAGCCTTTTGTTTTGTCAAGCTTCAACTGTTGTTTGCACCCATATGAAGGAAATTCTCATGATTTTTTAACAAGCTTCTGGCCATAGTGTGAATTTAACGAGTCTGCTGTTATAGTTAGTCCTAATACATCTCCTTATTGTAAGAACAATGTGGGGAGTTTGTTGCAAGTGAAAGTGGGTCAGATTTAGGAGTGTACTTGGGCCTACTTTCTCGCCTACCAAAGAGTAAATGTTGGGATTTTAGAGCCATGAAGGAGAAAGTTCAAAAGGTGGTGGCTTCGTGGAAAAGGAAGTTTTTTTCTATTAGTGGTAAGGGGATTCTGAATAAAGCGAAGGCGCAAGCATTCATGTCCTGTATAAAGCTCCCAAAGTCCTTGTGGCATAATCTATCTAGATACATAGTCCAATTTTGGTGGGAATCTTTGTTTGTTAAAAAGAAAATTCATTGGATGAATTGGAAGTTTATGTGTTTCCCTAAGGCTGAAGGGGTTATGGGCTTTAGGGATTTGGAAGGATTTAACCAAGCCATACTTGCCAAACAAGCTTGGAAGTTCCTTTACCATCCAAGCTCCATTGTTGCTCGGTTGTTCAAAGGAAGACATTTTTAGAATATGGAATTCTTGGAGGCTAGGGTGGGATAGAGGTCTTATGTTTGACAGAGTGTTTGTTGAGGAGGGAGCTATTGAAGCTTGAGATTAGAAGGTACATTGGTATGGGAGAAGACACACTTGTGTTCCATCATCCTTAGAGCCTTTGGGAGGCTTCTTTTAAGGCCTTAACCCCACCGATCGAGGGAACTGTTGGGTTAAAGGTGTGTAAGTTAATGTTGAAGGAGGGTGGTTAGGATGTGGTTAAGATGAGACAAATATTATGGGAGATTGATGTTGAAAAAATTCTTTCAATCCCGATCTGCAAAATTGTCAAGGCTGACTGTTGGGCTTGGCGCTTTACAAAAAATGGGCAGTTCTCAACAAAGAGTGCATATAAGATGTTTGTTAGGTTCCAATGTCTCCCTTCTTCCTCTGGTGAGGGTCCAACTTTGACTTGGTGGAAGAAGATGTGGAGTTGAGCTCTTCCTTCTAAAATTAAAATAGTTTTATGGAAATCTTTCCATTACATCCTCCCCACTAATGTTAATCTTGCAAATAAAAAAAAACTACTTCTTTTAGGTGGTGTGTGTGCTATAGATATGATTATGAATCTGAATCGCATGTGTTATTCAAGTGCAAGCGTGCTTCAAAAATTTGGCAAGAAATATTACTTGATTTTTGGTCTGATGAGTAGTCTGCTTTACTTTCAGGATGTGTCGATCGGTGCGGCTAAAAGGTTGAACAAGCAGGAGTTTTTGCTGCCTGAGGTTGCTTGTTGAGCTATTTGGGAAGACCAAAATAAGCTAAACTTTTTGTGCCCTATTGCTCCAATCGAGCATGAAATCAATTGGATTCTAAATTATTGTTCTGATATTGGTGGTTGTAGTGCATGTTTGGTTCTGGGGTCTGTTGCAAATGATACGACTAGGGGGTCGTTTAAGGGGTTGGTGTTGGGCAGGCAAATCCTACTATAAGAAGATCTCGTTGGGTGCTACTAGTGTTAGATGTCTTAAAATTAAACATAGATGTTGGTTGTCATGCTAATAAAATGGGGGTTGGCTTGGGTGTTGTGACTCAGGATGCTCACGACTAGATCCATGCTGCTCAGACGTCCTTCAGGCATGGGTGTTTTGAAGCTGAAGCCAGAAAGGTGATGGTTGTTCTGATTGGTTTGCAACTGGTCGAGGAGTTGGGATGTGAAGAAATTTGGATCAAATCTGATGCTGAGGGTGTTGTGAAACAGTTCCATTCATTGTCCTTCTCTCTTTTCCCTTATGGTGTTGTTTTTGCTGAGGCTTATGCTTTGATGTGTAGGTTGAGAATTGTGGATGATAAGCACTTGAAAAGTGCTTTCTATTCTCTTAAATTAAGGGAGTTTATATTAGATTTCACTTGTTTGCTAGTGATTTTCAGGTTAAAACGAGGAAAATTAGAAGAAACAACTAAAAGATCAAAACCGAACAAGAATACGGCGAAAAAGAGTTGAAAAACCAAAAAGGAAAAATTTTGGGGATAGCGCCGCGGCGCTGAAACATCAACGCATAGTTCTGGACGCAGAGTAGCATTGCGGCCCCGGGATGGCGCTACCTCGACGCATCTTGTTGAACGCATGACAGCGTCGCGGCGCTTGGACGGCACTGCCGCGGGGCTAAAATCCGAGAGCAATATTTCTGAAACGCATTTTAGCGTTGCGGCGCTTGGACGACGCTACCGCGCGCTAAAACCCGAGAGCAAACTTTTTCGGAAGCAGCTCTAGTGCCGCGGTGCTATGGGACAGCACCGCGGCGCCAGCTTTCCTTAAATGAAAATTTTGTATTTTTGGAAAATTTTTGGGCGGCCAAACTCTATAAATTTGGGGGTTTCCAGCAGTCCAATTCATCAAGAAAAATCCAGGCAAAGCAAAGAAGTTGCAGAACTAAAGAGATACAAAAAGGAGAGAATTAAGTGAGGGTTCAAAGAGTGAGTTAGTTGCAAGGAAGAGGAAAAGAGTTCGAGATAGTCTTGGTGCCCTTCGAAGTCCGACGTAA

mRNA sequence

ATGAGTAAACCATATGATCGGGTGGAAGGGAGATTTTTGGAAGTCATAATGTTGAAGATGGGTTTCCATCCGATGTGGGTGGAGCGTCTAGTGGATTGTGTGACTATAGTGAGCTTCTATGTGTTCATTAATGGAAATCCCTCTGAAAGTGGGTCAGATTTAGGAGTGTACTTGGGCCTACTTTCTCGCCTACCAAAGAGTAAATGTTGGGATTTTAGAGCCATGAAGGAGAAAGTTCAAAAGGTGGTGGCTTCGTGGAAAAGGAAGTTTTTTTCTATTAGTGGTAAGGGGATTCTGAATAAAGCGAAGGCGCAAGCATTCATGTCCTGTATAAAGCTCCCAAAGTCCTTGTGGCATAATCTATCTAGATACATAGTCCAATTTTGGTGGGAATCTTTGTTTGTTAAAAAGAAAATTCATTGGATGAATTGGAAGTTTATGTGTTTCCCTAAGGCTGAAGGGGTTATGGGCTTTAGGGATTTGGAAGGATTTAACCAAGCCATACTTGCCAAACAAGCTTGGAAGTTCCTTTACCATCCAAGCTCCATTGGTGGGATAGAGGTCTTATGTTTGACAGAGTGTTTGTTGAGGAGGGAGCTATTGAAGCTTGAGATTAGAAGCCTTTGGGAGGCTTCTTTTAAGGCCTTAACCCCACCGATCGAGGGAACTGTTGGGTTAAAGGATGTGGTTAAGATGAGACAAATATTATGGGAGATTGATGTTGAAAAAATTCTTTCAATCCCGATCTGCAAAATTGTCAAGGCTGACTGTTGGGCTTGGCGCTTTACAAAAAATGGGCAGTTCTCAACAAAGAGTGCATATAAGATGTTTGTTAGGTTCCAATGTCTCCCTTCTTCCTCTGGTGAGGGTCCAACTTTGACTTGGTGGAAGAAGATATATGATTATGAATCTGAATCGCATGTGTTATTCAAGTGCAAGCGTGCTTCAAAAATTTGGCAAGAAATATTACTTGATTTTTGGTCTGATGAGTTGAACAAGCAGGAGTTTTTGCTGCCTGAGGTTGCTTTGCATGTTTGGTTCTGGGGTCTGTTGCAAATGATACGACTAGGGGGTCGTTTAAGGGGTTGGTGTTGGGCAGGCAAATCCTACTATAAGAAGATCTCGTTGGGTGCTACTAGTATCCATGCTGCTCAGACGTCCTTCAGGCATGGGTGTTTTGAAGCTGAAGCCAGAAAGGTGATGGTTGTTCTGATTGGTTTGCAACTGGTCGAGGAGTTGGGATGTGAAGAAATTTGGATCAAATCTGATGCTGAGGGTGTTGTGAAACAGTTCCATTCATTGTCCTTCTCTCTTTTCCCTTATGGTGTTGTTTTTGCTGAGGCTTATGCTTTGATGTGTAGGTTGAGAATTGTGGATGATAAGCACTTGAAAATAGCATTGCGGCCCCGGGATGGCGCTACCTCGACGCATCTTGTTGAACGCATGACAGCGTCGCGGCGCTTGGACGGCACTGCCGCGGGGCTAAAATCCGAGAGCAATATTTCTGAAACGCATTTTAGCGTTGCGGCGCTTGGACGACGCTACCGCGCGCTAAAACCCGAGAGCAAACTTTTTCGGAAGCAGCTCTACAGTCCAATTCATCAAGAAAAATCCAGGCAAAGCAAAGAAGTTGCAGAACTAAAGAGATACAAAAAGGAGAGAATTAAGAAGAGGAAAAGAGTTCGAGATAGTCTTGGTGCCCTTCGAAGTCCGACGTAA

Coding sequence (CDS)

ATGAGTAAACCATATGATCGGGTGGAAGGGAGATTTTTGGAAGTCATAATGTTGAAGATGGGTTTCCATCCGATGTGGGTGGAGCGTCTAGTGGATTGTGTGACTATAGTGAGCTTCTATGTGTTCATTAATGGAAATCCCTCTGAAAGTGGGTCAGATTTAGGAGTGTACTTGGGCCTACTTTCTCGCCTACCAAAGAGTAAATGTTGGGATTTTAGAGCCATGAAGGAGAAAGTTCAAAAGGTGGTGGCTTCGTGGAAAAGGAAGTTTTTTTCTATTAGTGGTAAGGGGATTCTGAATAAAGCGAAGGCGCAAGCATTCATGTCCTGTATAAAGCTCCCAAAGTCCTTGTGGCATAATCTATCTAGATACATAGTCCAATTTTGGTGGGAATCTTTGTTTGTTAAAAAGAAAATTCATTGGATGAATTGGAAGTTTATGTGTTTCCCTAAGGCTGAAGGGGTTATGGGCTTTAGGGATTTGGAAGGATTTAACCAAGCCATACTTGCCAAACAAGCTTGGAAGTTCCTTTACCATCCAAGCTCCATTGGTGGGATAGAGGTCTTATGTTTGACAGAGTGTTTGTTGAGGAGGGAGCTATTGAAGCTTGAGATTAGAAGCCTTTGGGAGGCTTCTTTTAAGGCCTTAACCCCACCGATCGAGGGAACTGTTGGGTTAAAGGATGTGGTTAAGATGAGACAAATATTATGGGAGATTGATGTTGAAAAAATTCTTTCAATCCCGATCTGCAAAATTGTCAAGGCTGACTGTTGGGCTTGGCGCTTTACAAAAAATGGGCAGTTCTCAACAAAGAGTGCATATAAGATGTTTGTTAGGTTCCAATGTCTCCCTTCTTCCTCTGGTGAGGGTCCAACTTTGACTTGGTGGAAGAAGATATATGATTATGAATCTGAATCGCATGTGTTATTCAAGTGCAAGCGTGCTTCAAAAATTTGGCAAGAAATATTACTTGATTTTTGGTCTGATGAGTTGAACAAGCAGGAGTTTTTGCTGCCTGAGGTTGCTTTGCATGTTTGGTTCTGGGGTCTGTTGCAAATGATACGACTAGGGGGTCGTTTAAGGGGTTGGTGTTGGGCAGGCAAATCCTACTATAAGAAGATCTCGTTGGGTGCTACTAGTATCCATGCTGCTCAGACGTCCTTCAGGCATGGGTGTTTTGAAGCTGAAGCCAGAAAGGTGATGGTTGTTCTGATTGGTTTGCAACTGGTCGAGGAGTTGGGATGTGAAGAAATTTGGATCAAATCTGATGCTGAGGGTGTTGTGAAACAGTTCCATTCATTGTCCTTCTCTCTTTTCCCTTATGGTGTTGTTTTTGCTGAGGCTTATGCTTTGATGTGTAGGTTGAGAATTGTGGATGATAAGCACTTGAAAATAGCATTGCGGCCCCGGGATGGCGCTACCTCGACGCATCTTGTTGAACGCATGACAGCGTCGCGGCGCTTGGACGGCACTGCCGCGGGGCTAAAATCCGAGAGCAATATTTCTGAAACGCATTTTAGCGTTGCGGCGCTTGGACGACGCTACCGCGCGCTAAAACCCGAGAGCAAACTTTTTCGGAAGCAGCTCTACAGTCCAATTCATCAAGAAAAATCCAGGCAAAGCAAAGAAGTTGCAGAACTAAAGAGATACAAAAAGGAGAGAATTAAGAAGAGGAAAAGAGTTCGAGATAGTCTTGGTGCCCTTCGAAGTCCGACGTAA

Protein sequence

MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNPSESGSDLGVYLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSISGKGILNKAKAQAFMSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSSIGGIEVLCLTECLLRRELLKLEIRSLWEASFKALTPPIEGTVGLKDVVKMRQILWEIDVEKILSIPICKIVKADCWAWRFTKNGQFSTKSAYKMFVRFQCLPSSSGEGPTLTWWKKIYDYESESHVLFKCKRASKIWQEILLDFWSDELNKQEFLLPEVALHVWFWGLLQMIRLGGRLRGWCWAGKSYYKKISLGATSIHAAQTSFRHGCFEAEARKVMVVLIGLQLVEELGCEEIWIKSDAEGVVKQFHSLSFSLFPYGVVFAEAYALMCRLRIVDDKHLKIALRPRDGATSTHLVERMTASRRLDGTAAGLKSESNISETHFSVAALGRRYRALKPESKLFRKQLYSPIHQEKSRQSKEVAELKRYKKERIKKRKRVRDSLGALRSPT
Homology
BLAST of Cla97C08G148185 vs. NCBI nr
Match: KAA3482707.1 (reverse transcriptase [Gossypium australe])

HSP 1 Score: 166.8 bits (421), Expect = 5.5e-37
Identity = 103/325 (31.69%), Postives = 159/325 (48.92%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNPSES---------- 60
           MSK YDRVE  FL+ +MLKMGF   WVE ++ CVT  SF +++NG+   +          
Sbjct: 135 MSKAYDRVEWVFLKEVMLKMGFEKKWVELILKCVTTSSFTIYVNGHRGRTFEATRGLRQA 194

Query: 61  -------------------GSDLGVYLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFF 120
                               +D+  YLGL S + + K   F+ +KEK+   +  W  +F 
Sbjct: 195 QTRQKEIGKEVAAILGMRHSTDMEKYLGLPSVVGRRKKVSFQVLKEKILFRIKGWSNRFL 254

Query: 121 SISGKGILNKAKAQAF----MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFM 180
           S  GK +  K+  Q+     MSC  LPKS    L + + +FWW+    K+ IHW  W+ +
Sbjct: 255 SQGGKEVFIKSVLQSIPTYAMSCFLLPKSFCRELEQLMSKFWWQKAHGKQGIHWCQWQNL 314

Query: 181 CFPKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSSI-----GGIEVLCLTECLL-RRELL 240
             PK EG MGFRD+  FN A+LAKQ W+ L +P S+      G ++  L +  +    +L
Sbjct: 315 STPKDEGGMGFRDMAKFNLALLAKQGWRILNNPDSLVAKVGSGKDISVLNDVWIPDSHIL 374

Query: 241 KLEIRSLWEASFKALTPPIEGTVGLKDVVKMRQILWEIDVEKILSIPICKIVKADCWAWR 287
           +L       +  K +    + +   K  + +     E  V KI  IP+ + V  D  AWR
Sbjct: 375 RLSSHVTHLSDSKVVDLIDDSSREWKKEL-LETTFSEDIVAKIACIPLAREVHEDMIAWR 434

BLAST of Cla97C08G148185 vs. NCBI nr
Match: XP_030495126.1 (uncharacterized protein LOC115710915 [Cannabis sativa])

HSP 1 Score: 166.0 bits (419), Expect = 9.5e-37
Identity = 107/371 (28.84%), Postives = 168/371 (45.28%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFIN-----GNPSESGSDLG 60
           MSK YDRVE R LE +M+ +G+   WV+++++C+  +SF + +N     GN     + +G
Sbjct: 588 MSKAYDRVEWRLLETMMICLGYDKRWVDKIMNCIKSISFSMLLNGEINQGNGISLAAMMG 647

Query: 61  V--------YLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSISGKGILNKAKAQA- 120
           V        YLG+ + + K K   F  ++ K++     WK   FS +G+ IL KA  QA 
Sbjct: 648 VKLVDCHTKYLGIPASVGKKKKEVFEDIRTKIRTKFQGWKASLFSQAGREILLKAIIQAI 707

Query: 121 ---FMSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEG 180
               MSC +LPK L  ++   + +FWW S   K+KIHW NW  +C PK +G MGF++LE 
Sbjct: 708 PTYIMSCFRLPKELIKDIHAMMARFWWGSSDTKQKIHWGNWNKLCKPKEKGGMGFKNLEL 767

Query: 181 FNQAILAKQAWKFLYHPSS--------------------IGGIEVLCLTECLLRRELLKL 240
           FNQ++LAKQ WK + +P S                    + G         L  R+++  
Sbjct: 768 FNQSLLAKQGWKIINNPHSMLARVLKACYYTNSNFLEAKVCGFGSYMWRSILWGRKIIDK 827

Query: 241 EIR--------------------SLWEASFKALTPPIEGTVGLKDV------VKMRQILW 300
            IR                    S +     A  P       +KD        ++++   
Sbjct: 828 GIRWRVMAGRDIHINEDKWLPRPSTFSLRIPAHVPQGTTVNTIKDEDGHWNNQRVKECFH 887

Query: 301 EIDVEKILSIPICKIVKADCWAWRFTKNGQFSTKSAYKMFVRFQCLPSSSGEGPTLTWWK 309
             D+  IL I  C   + D   W +T +G ++  S YK+    +  P +  +     WW+
Sbjct: 888 PDDIPMILGITPCSTTQNDDLIWHYTPDGCYTVSSGYKVGTNNELTPGTLDDNEIKKWWR 947

BLAST of Cla97C08G148185 vs. NCBI nr
Match: XP_030934661.1 (uncharacterized protein LOC115960098 [Quercus lobata])

HSP 1 Score: 164.1 bits (414), Expect = 3.6e-36
Identity = 110/325 (33.85%), Postives = 155/325 (47.69%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNPS---------ESG 60
           MSK YDRVE  +LE IM KMGF   WV  +++CVT VS+ + ING PS           G
Sbjct: 543 MSKAYDRVEWLYLEKIMRKMGFAENWVALMMECVTTVSYSILINGEPSSVIRPLRGIRQG 602

Query: 61  SDLGVYLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSISGKGILNKAKAQAF---- 120
             L  YL LL    K+K   FR +KE+V   +  WK +  S +G  +L KA  QA     
Sbjct: 603 DPLSPYLFLLCTEGKNKKASFRYIKERVWAKLQGWKEQLLSQAGWEVLLKAVIQAIPTYA 662

Query: 121 MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEGFNQA 180
           MSC KLP +L + +   I +FWW     ++KIHW  W  +C PK+ G MGFRDL+ FN A
Sbjct: 663 MSCFKLPITLCNEIESLIKKFWWGQRGEQRKIHWAKWSSLCKPKSLGGMGFRDLQKFNDA 722

Query: 181 ILAKQAWKFLYHPSSIGGIEVLCLTECLLRRELLKLEIRSLWEASFKALTPPIEGTVGL- 240
           +LAKQ W+ L    S+              +      I    E     L        GL 
Sbjct: 723 MLAKQVWRLLACEDSL-------FYRFFKAKFFPTGSILEAKEGKGPLLGKASSRAKGLS 782

Query: 241 -KDVVKMRQILWEIDVEKILSIPICKIVKADCWAWRFTKNGQFSTKSAYKMFVRFQC--L 300
            K+++    + +E  +  I +IP+      D   W   ++G +S KS Y + V  +   L
Sbjct: 783 NKELIDTNFLPYEAAI--IKAIPLSFGNCEDVRFWPLNRDGIYSVKSGYHLLVNMELDEL 842

Query: 301 PSSSGEGPTLTWWKKIYDYESESHV 309
           P +S        WK +++ +  + V
Sbjct: 843 PRASDPSSARRLWKGVWNLKVPNRV 858

BLAST of Cla97C08G148185 vs. NCBI nr
Match: XP_030505522.1 (uncharacterized protein LOC115720515 [Cannabis sativa])

HSP 1 Score: 162.9 bits (411), Expect = 8.0e-36
Identity = 113/385 (29.35%), Postives = 172/385 (44.68%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFING--------------N 60
           MSK YDRVE  F+E ++LK+GF   WV++L+ CV  V  Y   +G              N
Sbjct: 373 MSKAYDRVEWVFVERMLLKLGFEQQWVDKLMKCVYSVRLYAACSGQMINYTKSLLLFSPN 432

Query: 61  PSES-------------GSDLGVYLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSI 120
             E                ++  YLGL   + ++K   FR +K+K+   + SW  K FS 
Sbjct: 433 TPEGIRVQYVSSLAMTMTEEIETYLGLPMVVGRNKKAIFRPIKDKIWSKLNSWHTKLFSQ 492

Query: 121 SGKGILNKAKAQA----FMSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCF 180
           +GK IL KA  Q+    +MSC  +P+     + + + ++WW S   K+KIHW  W+ +CF
Sbjct: 493 AGKEILLKAVVQSMPMYYMSCFIIPEGTCEEIEKLMARYWWGSFQSKRKIHWRAWQKLCF 552

Query: 181 PKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSSI----------GGIEVLCLTE------ 240
            K +G +GFR    +NQA+LAKQAW+ L +P+SI               L  TE      
Sbjct: 553 SKRKGGLGFRRFVQYNQALLAKQAWRVLINPTSILAQVLKARYFPQQSFLEATESSHPSQ 612

Query: 241 ----CLLRRELLKLEIR-------------SLW---EASFKALTPPIEGTVGLKDVVK-- 300
                +  +ELL   +R               W     SF  +T  +   + + ++++  
Sbjct: 613 IWRGIVWGKELLIKGLRRRIGNGANTRVFKDPWIPRPPSFLPITKEVGNLMMVSELIEQS 672

Query: 301 -------MRQILWEIDVEKILSIPICKIVKADCWAWRFTKNGQFSTKSAYKMFVRFQCLP 310
                  + Q+    D + ILSIPI      D W W FT +G +S KS Y + +  + L 
Sbjct: 673 GQWNIDLIHQVFSTPDSQLILSIPITLYEHDDDWLWHFTSHGHYSVKSGYNLAIGGENLQ 732

BLAST of Cla97C08G148185 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 156.0 bits (393), Expect = 9.8e-34
Identity = 128/411 (31.14%), Postives = 174/411 (42.34%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMW-----------VERLV---------------DCV 60
           MSK YDRVE  FLE +MLKMGF   W           +ER++                 +
Sbjct: 426 MSKAYDRVEWNFLEAVMLKMGFDFRWKVYQTYCNVLQIERVLRDYVSRVGALLLLTFSLL 485

Query: 61  TIVSFYVFING---------------------------NPSESGSDLGV--------YLG 120
            IVS+++ + G                             S   + L V        YLG
Sbjct: 486 MIVSYFLRLVGGKVSVAEIAYRKCTGQALIKLPEYQDRQSSLIQNILSVNMVECQLQYLG 545

Query: 121 LLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSISGKGILNKAKAQAF----MSCIKLPK 180
           L + +P+++   F  +K++V K +  WK K FSI GK +L KA AQA     MSC +LPK
Sbjct: 546 LPTFMPRNRRMHFNYIKDRVWKHLQGWKAKLFSIGGKEVLIKAVAQAIPCYTMSCFRLPK 605

Query: 181 SLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEGFNQAILAKQAWK 240
            L         +FWW S    KKIHW+ W  +  PK EG MGFRDLE FN+A+LAKQ W+
Sbjct: 606 RLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWR 665

Query: 241 FLYHPSS--------------------IGGIEVLCLTECLLRRELLKLEIR--------- 297
            L HP+S                    I G         L  R+LLK  +R         
Sbjct: 666 ILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSV 725

BLAST of Cla97C08G148185 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.4e-12
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 0

Query: 108 MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKA-EGVMGFRDLEGFNQ 167
           MSC +L K L   L+  + +FWW S   K+KI W+ W+ +C  K  +G +GFRDL  FNQ
Sbjct: 8   MSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQ 67

Query: 168 AILAKQAWKFLYHPSSI 184
           A+LAKQ+++ ++ P ++
Sbjct: 68  ALLAKQSFRIIHQPHTL 84

BLAST of Cla97C08G148185 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.4e-12
Identity = 46/163 (28.22%), Postives = 81/163 (49.69%), Query Frame = 0

Query: 72  FRAMKEKVQKVVASWKRKFFSISGKGILNKAKAQAF----MSCIKLPKSLWHNLSRYIVQ 131
           F  + E+V   ++ W+ K  S +G+  L KA   +     MS I LP+S+ + L +    
Sbjct: 13  FGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRT 72

Query: 132 FWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSSIGGIE 191
           F W S   KKK H + W  +C PK EG +G R  +  N+A+++K  W+ L   +S+  + 
Sbjct: 73  FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLV 132

Query: 192 VLCLTECLLRRELLKLEIRSLWEASFKALTPPIEGTVGLKDVV 231
           +         R+   L  +  W ++++++       +GL+DVV
Sbjct: 133 LQKKYHVGEIRDSRWLIPKGSWSSTWRSI------AIGLRDVV 169

BLAST of Cla97C08G148185 vs. ExPASy TrEMBL
Match: A0A5B6WNR4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_004931 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.7e-37
Identity = 103/325 (31.69%), Postives = 159/325 (48.92%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNPSES---------- 60
           MSK YDRVE  FL+ +MLKMGF   WVE ++ CVT  SF +++NG+   +          
Sbjct: 135 MSKAYDRVEWVFLKEVMLKMGFEKKWVELILKCVTTSSFTIYVNGHRGRTFEATRGLRQA 194

Query: 61  -------------------GSDLGVYLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFF 120
                               +D+  YLGL S + + K   F+ +KEK+   +  W  +F 
Sbjct: 195 QTRQKEIGKEVAAILGMRHSTDMEKYLGLPSVVGRRKKVSFQVLKEKILFRIKGWSNRFL 254

Query: 121 SISGKGILNKAKAQAF----MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFM 180
           S  GK +  K+  Q+     MSC  LPKS    L + + +FWW+    K+ IHW  W+ +
Sbjct: 255 SQGGKEVFIKSVLQSIPTYAMSCFLLPKSFCRELEQLMSKFWWQKAHGKQGIHWCQWQNL 314

Query: 181 CFPKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSSI-----GGIEVLCLTECLL-RRELL 240
             PK EG MGFRD+  FN A+LAKQ W+ L +P S+      G ++  L +  +    +L
Sbjct: 315 STPKDEGGMGFRDMAKFNLALLAKQGWRILNNPDSLVAKVGSGKDISVLNDVWIPDSHIL 374

Query: 241 KLEIRSLWEASFKALTPPIEGTVGLKDVVKMRQILWEIDVEKILSIPICKIVKADCWAWR 287
           +L       +  K +    + +   K  + +     E  V KI  IP+ + V  D  AWR
Sbjct: 375 RLSSHVTHLSDSKVVDLIDDSSREWKKEL-LETTFSEDIVAKIACIPLAREVHEDMIAWR 434

BLAST of Cla97C08G148185 vs. ExPASy TrEMBL
Match: A0A2N9EV70 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10579 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-36
Identity = 114/348 (32.76%), Postives = 169/348 (48.56%), Query Frame = 0

Query: 1    MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNPS---------ESG 60
            MSK YDRVE  +LE IM KMGFH  W+  ++ C++ VS+ V ING+P            G
Sbjct: 728  MSKAYDRVEWCYLEQIMKKMGFHQKWIGLMLACISSVSYSVLINGDPHGNIQPSRGLRQG 787

Query: 61   SDLGVYL------GLLSRLPKSKC-----WDFRAMKEKVQKVVASWKRKFFSISGKGILN 120
              L  YL      GL S + +++        F  +KE+V   +  WK K  S +G+ +L 
Sbjct: 788  DPLSPYLFLLCAEGLHSLIKQAEASGDMQESFAQIKERVWHKLKGWKEKLLSQAGREVLI 847

Query: 121  KAKAQAF----MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKAEGVM 180
            KA AQA     MSC +LP  L H+L   I +FWW +   +KKIHW++WK +C PK  G M
Sbjct: 848  KAVAQAIPAYSMSCFRLPIKLCHDLEALICRFWWSNNPDQKKIHWVSWKQLCAPKKRGGM 907

Query: 181  GFRDLEGFNQAILAKQAWKFLYHPSSIGGIEVLCLTECLLRRELLKL---------EIRS 240
            GFRDL+ FN+A+LAKQA + +    S     +    E LLR  + ++         + R 
Sbjct: 908  GFRDLQKFNEALLAKQADEKI--RGSYAWQSIRKAREVLLRGGVWRVGDGKRIKIWKHRW 967

Query: 241  LWEASFKALT---PPIEGTVGLKDVVKMRQILWE----------IDVEKILSIPICKIVK 300
            L E   + +    PP+     +  ++   ++ W+           D E I +IP+     
Sbjct: 968  LLEDCHRTIITHGPPLLQDCTVDQLIIKPKMEWDTALLDKLFIPYDAEAIKNIPLSNPAP 1027

BLAST of Cla97C08G148185 vs. ExPASy TrEMBL
Match: A0A2N9I264 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48019 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-36
Identity = 113/399 (28.32%), Postives = 168/399 (42.11%), Query Frame = 0

Query: 1    MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNP------------- 60
            MSK YDRVE  +L+ IMLK+GFHP WV+ ++ CVT  ++ + +NG P             
Sbjct: 826  MSKAYDRVEWDYLQAIMLKLGFHPNWVKLIMACVTTATYAIMVNGEPKGYVKPQLVTRPS 885

Query: 61   -----------SESGSDLGVYLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSISGK 120
                           +    YLGL   + ++K   F  +K++V + +  WK K  S +G+
Sbjct: 886  LPGILSVPCLAQTLTTQFEKYLGLPPVVGRAKRRAFNEIKDRVWRRLQGWKEKLLSQAGR 945

Query: 121  GILNKAKAQAF----MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKA 180
             +L KA  QA     M C KLP  L  +LS    +FWW    V++KIHW++   +   K 
Sbjct: 946  EVLIKAVIQAIPIYAMGCFKLPAGLCADLSAMATRFWWGQKGVERKIHWLSKTKLMKSKR 1005

Query: 181  EGVMGFRDLEGFNQAILAKQAWKFLYHPSSIGGIEVLCLTECLLRRELLKLEIRSLWEAS 240
            EG MGFRDL+ FN+A+LA+Q W+ L+ PSS      L ++ C  R               
Sbjct: 1006 EGGMGFRDLQLFNKALLARQGWRLLHQPSS------LLMSACSWR--------------- 1065

Query: 241  FKALTPPIEGTVGLKDVVKMRQILWEIDVEKILSIPICKIVKADCWAWRFTKNGQFSTKS 300
                                  ++W++        P+ K   AD   W  TK G FS KS
Sbjct: 1066 ----------------------VMWKV----YFPFPLSKRKPADVLIWTGTKQGTFSVKS 1125

Query: 301  AYKMFVRFQCL---PSSSGEGPTLTWWKKIY----------------------------- 327
            AY+M    Q +    SSS       +W  I+                             
Sbjct: 1126 AYRMLYSHQVVAEASSSSSRNSAQQFWSSIWATSVPPKVRVFIWRACKGILPTQTHLFDK 1177

BLAST of Cla97C08G148185 vs. ExPASy TrEMBL
Match: A0A2N9ID42 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49851 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-36
Identity = 124/461 (26.90%), Postives = 196/461 (42.52%), Query Frame = 0

Query: 1    MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNP------------- 60
            MSK YD+VE  +L+ IMLKMGFH  WV+ ++ CVT  ++ + +NG P             
Sbjct: 897  MSKAYDKVEWDYLQAIMLKMGFHLNWVKLIMACVTTATYAIMVNGEPKGATSNECRALHD 956

Query: 61   -----------------------------------SESGSD----LGVYLGLLSRLPKSK 120
                                               S  GSD       YLGL   + ++K
Sbjct: 957  LLALYANASGQVVNTDKTVLFFSYNTPQHTCDSICSIFGSDPMTQFEKYLGLPPVVGRAK 1016

Query: 121  CWDFRAMKEKVQKVVASWKRKFFSISGKGILNKAKAQAF----MSCIKLPKSLWHNLSRY 180
               F  +K++V + +  WK K  S +G+ +L KA  QA     MSC K P      LS  
Sbjct: 1017 RRAFNEIKDRVWRRLQGWKEKLLSQAGREVLIKAVIQAIPTYAMSCFKFPAGFCAELSAM 1076

Query: 181  IVQFWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSS-- 240
              +FWW    V++KIHW++   +   K +G MGFRDL+ FN+A+LA+Q W+ L+ P+S  
Sbjct: 1077 ATRFWWGQRGVERKIHWLSKSKLIKSKNKGGMGFRDLQLFNKALLARQGWRLLHQPASLL 1136

Query: 241  -------------------IGGIEVLCLTECLLRRELL-----------KLEI-RSLW-- 300
                               +G    +  + C  +  L+           K++I    W  
Sbjct: 1137 CRVLKAKYFPNQSFLEAAVLGNASYIWSSICEAKEVLINGTRWRVGRGDKIKIWNDRWLP 1196

Query: 301  -EASFKALTP--PIEGTVGLKDVVKMRQILWEI----------DVEKILSIPICKIVKAD 329
              ++F+ ++P   ++    +  ++ +  + W +          DVE IL+IP  K   +D
Sbjct: 1197 SPSTFRVISPMSGLDPEATVDTLICVDSMSWNLPLLHSMFLNCDVESILAIPSSKRKPSD 1256

BLAST of Cla97C08G148185 vs. ExPASy TrEMBL
Match: M5XK32 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016563mg PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.6e-36
Identity = 121/444 (27.25%), Postives = 181/444 (40.77%), Query Frame = 0

Query: 1   MSKPYDRVEGRFLEVIMLKMGFHPMWVERLVDCVTIVSFYVFINGNP------------- 60
           MSK YDRVE  FLE +ML MGF  +WV  ++DCVT VS+   +NG P             
Sbjct: 176 MSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLRQG 235

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 236 DPLSPYLFLLCAEVLPHDSFVFAKATDNNCGVLKHIFEVYERASGEQINCQKSCVAFSAN 295

Query: 121 ------SESGSDLGV--------YLGLLSRLPKSKCWDFRAMKEKVQKVVASWKRKFFSI 180
                 S   S LGV        YLGL   L ++K + FR +KE+V K +  W+ +  SI
Sbjct: 296 IHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTFCFRYLKERVWKKLQGWREQTLSI 355

Query: 181 SGKGILNKAKAQAF----MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCF 240
           +GK +L K  AQ+     M+C  LP+ L H + + + +FWW      +KIHWM W+ +C 
Sbjct: 356 AGKEVLLKVVAQSIPLYVMNCFLLPQGLCHEIEQMMARFWWGQQGENRKIHWMRWERLCK 415

Query: 241 PKAEGVMGFRDLEGFNQAILAKQAWKFLYHPSSIG-------------------GIEVLC 300
            K EG MGFR L+ FN A+LAKQ W+ +++P S+                    G    C
Sbjct: 416 AKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPHTNFWEATLGSRPSC 475

Query: 301 LTECL-LRRELLKLEIR---------SLW-------EASFKALTPPIEGTVGLK------ 302
           + + +   R++L++  R          +W        A+F  +T P++G    K      
Sbjct: 476 VWKSIWTARKVLEMGSRFQIGDGKSVRIWGDKWVPRPAAFVVITSPLDGMENTKVSELIC 535

BLAST of Cla97C08G148185 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-13
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 0

Query: 108 MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKA-EGVMGFRDLEGFNQ 167
           MSC +L K L   L+  + +FWW S   K+KI W+ W+ +C  K  +G +GFRDL  FNQ
Sbjct: 8   MSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQ 67

Query: 168 AILAKQAWKFLYHPSSI 184
           A+LAKQ+++ ++ P ++
Sbjct: 68  ALLAKQSFRIIHQPHTL 84

BLAST of Cla97C08G148185 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 7.8e-13
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 108 MSCIKLPKSLWHNLSRYIVQFWWESLFVKKKIHWMNWKFMCFPKAEGVMGFRDLEGFNQA 167
           M+C  LPK++   +   +  FWW +    K +HW  W  +   KAEG +GF+D+E FN A
Sbjct: 8   MACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLA 67

Query: 168 ILAKQAWKFLYHPSSI 184
           +L KQ W+ L  P S+
Sbjct: 68  LLGKQMWRMLSRPESL 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA3482707.15.5e-3731.69reverse transcriptase [Gossypium australe][more]
XP_030495126.19.5e-3728.84uncharacterized protein LOC115710915 [Cannabis sativa][more]
XP_030934661.13.6e-3633.85uncharacterized protein LOC115960098 [Quercus lobata][more]
XP_030505522.18.0e-3629.35uncharacterized protein LOC115720515 [Cannabis sativa][more]
XP_022150918.19.8e-3431.14uncharacterized protein LOC111018954 [Momordica charantia][more]
Match NameE-valueIdentityDescription
P932956.4e-1242.86Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F66.4e-1228.22Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A5B6WNR42.7e-3731.69Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_004931 PE=4 SV=1[more]
A0A2N9EV701.0e-3632.76Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10579 PE=4 SV=1[more]
A0A2N9I2641.7e-3628.32CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4801... [more]
A0A2N9ID422.3e-3626.90CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4985... [more]
M5XK328.6e-3627.25Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
Match NameE-valueIdentityDescription
ATMG00310.14.6e-1342.86RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.17.8e-1339.47Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..550
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 1..49
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 51..237
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 51..237
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G148185.1Cla97C08G148185.1mRNA