Cla97C08G147140 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G147140
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptionpolcalcin Syr v 3-like
LocationCla97Chr08: 9694183 .. 9694437 (+)
RNA-Seq ExpressionCla97C08G147140
SyntenyCla97C08G147140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACTCAGAGGGAAACAGGGGAGAATGCGAGCGAATCTTTAAGCGCTTCGACAGCAACGGCGACGGCAAGATCTCGATATCGGAGCTAGAGAGTGCTCTGCACGCGCTTGGCTGCTCCTCGCCCGAAGAAGTCGTTCGACGGATGTCGGAAATCGACAAAGACGGCAACGGCTTCATTTCACTTGATGAACTCTGCGATTTCCAGAGGGCTAATCCTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG

mRNA sequence

ATGGCGGACTCAGAGGGAAACAGGGGAGAATGCGAGCGAATCTTTAAGCGCTTCGACAGCAACGGCGACGGCAAGATCTCGATATCGGAGCTAGAGAGTGCTCTGCACGCGCTTGGCTGCTCCTCGCCCGAAGAAGTCGTTCGACGGATGTCGGAAATCGACAAAGACGGCAACGGCTTCATTTCACTTGATGAACTCTGCGATTTCCAGAGGGCTAATCCTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG

Coding sequence (CDS)

ATGGCGGACTCAGAGGGAAACAGGGGAGAATGCGAGCGAATCTTTAAGCGCTTCGACAGCAACGGCGACGGCAAGATCTCGATATCGGAGCTAGAGAGTGCTCTGCACGCGCTTGGCTGCTCCTCGCCCGAAGAAGTCGTTCGACGGATGTCGGAAATCGACAAAGACGGCAACGGCTTCATTTCACTTGATGAACTCTGCGATTTCCAGAGGGCTAATCCTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG

Protein sequence

MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
Homology
BLAST of Cla97C08G147140 vs. NCBI nr
Match: XP_038886760.1 (polcalcin Phl p 7-like [Benincasa hispida])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 78/84 (92.86%), Postives = 80/84 (95.24%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MADSEG RGECERIFKRFDS+GDGKIS+SELESAL ALG SSPEEV RRMSEIDKDGNGF
Sbjct: 1  MADSEGTRGECERIFKRFDSDGDGKISLSELESALRALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISLDELCDFQRANPDLMKEVCKRL
Sbjct: 61 ISLDELCDFQRANPDLMKEVCKRL 84

BLAST of Cla97C08G147140 vs. NCBI nr
Match: XP_022929895.1 (polcalcin Phl p 7-like [Cucurbita moschata] >KAG6575329.1 hypothetical protein SDJN03_25968, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013869.1 hypothetical protein SDJN02_24038, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150.2 bits (378), Expect = 7.9e-33
Identity = 73/84 (86.90%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGF
Sbjct: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISLDELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLDELCEFQRANPDLMKEVCKRL 84

BLAST of Cla97C08G147140 vs. NCBI nr
Match: XP_023549323.1 (polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGF
Sbjct: 1  MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISLDELC+FQRANPDLMKEVC+RL
Sbjct: 61 ISLDELCEFQRANPDLMKEVCRRL 84

BLAST of Cla97C08G147140 vs. NCBI nr
Match: XP_008445690.1 (PREDICTED: polcalcin Syr v 3-like [Cucumis melo] >KAA0063144.1 polcalcin Syr v 3-like [Cucumis melo var. makuwa] >TYK27519.1 polcalcin Syr v 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 5.1e-32
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MADS+G + ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNGF
Sbjct: 1  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISL+ELCDFQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 83

BLAST of Cla97C08G147140 vs. NCBI nr
Match: XP_022992461.1 (polcalcin Phl p 7-like [Cucurbita maxima])

HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31
Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGF
Sbjct: 1  MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISLDEL +FQRANPDLMKEVCKRL
Sbjct: 61 ISLDELFEFQRANPDLMKEVCKRL 84

BLAST of Cla97C08G147140 vs. ExPASy Swiss-Prot
Match: P94092 (Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-19
Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MAD+    G+ E IFKRFD+NGDGKIS++EL  AL  LG +S +EV R M+EID DG+GF
Sbjct: 1  MADT----GDMEHIFKRFDTNGDGKISLAELTDALRTLGSTSADEVQRMMAEIDTDGDGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCK 83
          I  DE   F  ANP LMK+V K
Sbjct: 61 IDFDEFISFCNANPGLMKDVAK 78

BLAST of Cla97C08G147140 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-18
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 0

Query: 3  DSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFIS 62
          D+  +  + ERIFKRFD+NGDGKIS SEL  AL  LG  +P+EV R M+EID DG+GFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 LDELCDFQRANPDLMKEVCK 83
           DE  DF RAN  L+K+V K
Sbjct: 65 FDEFTDFARANRGLVKDVSK 84

BLAST of Cla97C08G147140 vs. ExPASy Swiss-Prot
Match: P58171 (Polcalcin Syr v 3 OS=Syringa vulgaris OX=34270 GN=SYRV3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-18
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 10 ECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDF 69
          E ERIFKRFD+NGDGKIS SEL   L  LG  +PEE+ R M+EID DG+GFIS +E  DF
Sbjct: 7  ELERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGFISFEEFKDF 66

Query: 70 QRANPDLMKEVCK 83
           RAN  L+K+V K
Sbjct: 67 ARANSGLIKDVAK 79

BLAST of Cla97C08G147140 vs. ExPASy Swiss-Prot
Match: O82040 (Polcalcin Phl p 7 OS=Phleum pratense OX=15957 GN=P7 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-18
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 10 ECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDF 69
          + ERIFKRFD+NGDGKIS+SEL  AL  LG +S +EV R M+EID DG+GFI  +E   F
Sbjct: 4  DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISF 63

Query: 70 QRANPDLMKEVCK 83
            ANP LMK+V K
Sbjct: 64 CNANPGLMKDVAK 76

BLAST of Cla97C08G147140 vs. ExPASy Swiss-Prot
Match: O81092 (Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-18
Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MAD      E ERIFKRFD+NGDGKIS SEL   L  LG  +PEE+ R M+EID DG+GF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCK 83
          IS +E   F RAN  L+K+V K
Sbjct: 61 ISFEEFTVFARANRGLVKDVAK 82

BLAST of Cla97C08G147140 vs. ExPASy TrEMBL
Match: A0A0A0KAW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041150 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34
Identity = 74/84 (88.10%), Postives = 80/84 (95.24%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MADS+GNR ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNG+
Sbjct: 1  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGY 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISL+ELCDFQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 84

BLAST of Cla97C08G147140 vs. ExPASy TrEMBL
Match: A0A6J1EVJ6 (polcalcin Phl p 7-like OS=Cucurbita moschata OX=3662 GN=LOC111436362 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.8e-33
Identity = 73/84 (86.90%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGF
Sbjct: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISLDELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLDELCEFQRANPDLMKEVCKRL 84

BLAST of Cla97C08G147140 vs. ExPASy TrEMBL
Match: A0A5A7V7E6 (Polcalcin Syr v 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1213G00200 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-32
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MADS+G + ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNGF
Sbjct: 1  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISL+ELCDFQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 83

BLAST of Cla97C08G147140 vs. ExPASy TrEMBL
Match: A0A1S3BDB5 (polcalcin Syr v 3-like OS=Cucumis melo OX=3656 GN=LOC103488650 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-32
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MADS+G + ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNGF
Sbjct: 1  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISL+ELCDFQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 83

BLAST of Cla97C08G147140 vs. ExPASy TrEMBL
Match: A0A6J1JTM0 (polcalcin Phl p 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488757 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.4e-32
Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGF
Sbjct: 1  MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCDFQRANPDLMKEVCKRL 85
          ISLDEL +FQRANPDLMKEVCKRL
Sbjct: 61 ISLDELFEFQRANPDLMKEVCKRL 84

BLAST of Cla97C08G147140 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 )

HSP 1 Score: 84.7 bits (208), Expect = 3.8e-17
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MAD+   + E +RIFK+FD+NGDGKIS +ELE AL  LG  + ++V R M+EID DG+G 
Sbjct: 1  MADAT-EKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGN 60

Query: 61 ISLDELCDFQRANPDLMKEVCK 83
          IS  E  DF  AN  LMK+V K
Sbjct: 61 ISYQEFTDFAGANRGLMKDVAK 81

BLAST of Cla97C08G147140 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-17
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 1  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGF 60
          MAD+   + E +RIFK+FD+NGDGKIS +EL  AL  LG  + E++ R M+EID DG+G+
Sbjct: 1  MADAT-EKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISLDELCDFQRANPDLMKEVCK 83
          IS  E  DF  AN  LMK+V K
Sbjct: 61 ISYQEFIDFASANRGLMKDVAK 81

BLAST of Cla97C08G147140 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-12
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0

Query: 6  GNRGECERIFKRFDSNGDGKISISELESALHALG-CSSPEEVVRRMSEIDKDGNGFISLD 65
          G+  + +++F+RFD NGDGKIS+ EL+  + AL   +SPEE V  M + D DGNGFI LD
Sbjct: 13 GSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLD 72

BLAST of Cla97C08G147140 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 60.5 bits (145), Expect = 7.7e-10
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 6  GNRGECERIFKRFDSNGDGKISISELESALHALG-CSSPEEVVRRMSEIDKDGNGFISLD 65
          G+  + +++F+RFD N DGKISI EL+  + AL   +S EE    M E D DGNGFI LD
Sbjct: 11 GSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLD 70

BLAST of Cla97C08G147140 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-09
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0

Query: 7  NRGECERIFKRFDSNGDGKISISELESALHALGCSSPE-EVVRRMSEIDKDGNGFISLDE 66
          N  E +++F +FDSNGDGKIS+ EL     A+G S  E E+ R + E+D D +G+I+LDE
Sbjct: 20 NPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDE 79

Query: 67 LCDFQRAN 74
               R++
Sbjct: 80 FSTLCRSS 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886760.12.2e-3592.86polcalcin Phl p 7-like [Benincasa hispida][more]
XP_022929895.17.9e-3386.90polcalcin Phl p 7-like [Cucurbita moschata] >KAG6575329.1 hypothetical protein S... [more]
XP_023549323.12.3e-3285.71polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo][more]
XP_008445690.15.1e-3286.90PREDICTED: polcalcin Syr v 3-like [Cucumis melo] >KAA0063144.1 polcalcin Syr v 3... [more]
XP_022992461.11.9e-3185.71polcalcin Phl p 7-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P940926.7e-1958.54Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2[more]
Q84V361.5e-1860.00Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1[more]
P581711.5e-1863.01Polcalcin Syr v 3 OS=Syringa vulgaris OX=34270 GN=SYRV3 PE=1 SV=1[more]
O820402.0e-1861.64Polcalcin Phl p 7 OS=Phleum pratense OX=15957 GN=P7 PE=1 SV=1[more]
O810923.3e-1858.54Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KAW92.6e-3488.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041150 PE=4 SV=1[more]
A0A6J1EVJ63.8e-3386.90polcalcin Phl p 7-like OS=Cucurbita moschata OX=3662 GN=LOC111436362 PE=4 SV=1[more]
A0A5A7V7E62.5e-3286.90Polcalcin Syr v 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BDB52.5e-3286.90polcalcin Syr v 3-like OS=Cucumis melo OX=3656 GN=LOC103488650 PE=4 SV=1[more]
A0A6J1JTM09.4e-3285.71polcalcin Phl p 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488757 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G17480.13.8e-1754.88pollen calcium-binding protein 1 [more]
AT3G03430.15.0e-1753.66Calcium-binding EF-hand family protein [more]
AT5G37770.12.8e-1252.46EF hand calcium-binding protein family [more]
AT1G66400.17.7e-1050.82calmodulin like 23 [more]
AT1G18210.13.8e-0944.12Calcium-binding EF-hand family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 45..73
e-value: 0.037
score: 23.2
coord: 10..38
e-value: 9.3E-5
score: 31.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 12..69
e-value: 8.7E-13
score: 48.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 6..41
score: 14.736568
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 44..76
score: 10.105932
IPR002048EF-hand domainCDDcd00051EFhcoord: 10..69
e-value: 3.27473E-16
score: 64.1061
NoneNo IPR availableGENE3D1.10.238.10coord: 3..84
e-value: 2.8E-20
score: 74.0
NoneNo IPR availablePANTHERPTHR10891:SF775CALCIUM-BINDING POLLEN ALLERGENcoord: 10..82
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 10..82
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 54..66
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 5..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G147140.1Cla97C08G147140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding