Cla97C08G144650 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G144650
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionSTOREKEEPER protein-like
LocationCla97Chr08: 655325 .. 655708 (-)
RNA-Seq ExpressionCla97C08G144650
SyntenyCla97C08G144650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGAGCGTGGGAATGAAGAAGAAAAAAAGGAGCATTCAAAGAAGAAGAAGAAGAATAAGAAAGAAAGAAAGAAGAATAAAAGTAGAAAGGAATTGAATGGTGATGAAAATATATGGTTATGTCCGATGATATCAACGGTGGGAATGAAGTTTGATTTGTCGAATGATTTCATGTCGAAAGAATTTGTTGAGTTTCTTTACAATGAAGGAGTGGATGTAGATTTGATGGATAGTGAAAGAGTTAGAGATTTGAAGAGGAAATATGGGGAAGTGGAAATTTGTAGGAGTGAATACGAATACAAGCAAGCCAAACTCTGTACCAAGTTGGAAAAACTCAAGTGTCAACATTATCAAACGGCTTTGCAAAAATTTTCTTAA

mRNA sequence

ATGGAGAAGGAGCGTGGGAATGAAGAAGAAAAAAAGGAGCATTCAAAGAAGAAGAAGAAGAATAAGAAAGAAAGAAAGAAGAATAAAAGTAGAAAGGAATTGAATGGTGATGAAAATATATGGTTATGTCCGATGATATCAACGGTGGGAATGAAGTTTGATTTGTCGAATGATTTCATGTCGAAAGAATTTGTTGAGTTTCTTTACAATGAAGGAGTGGATGTAGATTTGATGGATAGTGAAAGAGTTAGAGATTTGAAGAGGAAATATGGGGAAGTGGAAATTTGTAGGAGTGAATACGAATACAAGCAAGCCAAACTCTGTACCAAGTTGGAAAAACTCAAGTGTCAACATTATCAAACGGCTTTGCAAAAATTTTCTTAA

Coding sequence (CDS)

ATGGAGAAGGAGCGTGGGAATGAAGAAGAAAAAAAGGAGCATTCAAAGAAGAAGAAGAAGAATAAGAAAGAAAGAAAGAAGAATAAAAGTAGAAAGGAATTGAATGGTGATGAAAATATATGGTTATGTCCGATGATATCAACGGTGGGAATGAAGTTTGATTTGTCGAATGATTTCATGTCGAAAGAATTTGTTGAGTTTCTTTACAATGAAGGAGTGGATGTAGATTTGATGGATAGTGAAAGAGTTAGAGATTTGAAGAGGAAATATGGGGAAGTGGAAATTTGTAGGAGTGAATACGAATACAAGCAAGCCAAACTCTGTACCAAGTTGGAAAAACTCAAGTGTCAACATTATCAAACGGCTTTGCAAAAATTTTCTTAA

Protein sequence

MEKERGNEEEKKEHSKKKKKNKKERKKNKSRKELNGDENIWLCPMISTVGMKFDLSNDFMSKEFVEFLYNEGVDVDLMDSERVRDLKRKYGEVEICRSEYEYKQAKLCTKLEKLKCQHYQTALQKFS
Homology
[Close]
BLAST of Cla97C08G144650 vs. NCBI nr
Match: KAG6585874.1 (STOREKEEPER protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-14
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0 

Query: 13  EHSKKKKKNKKERKKNKSRKELNGDENIWLCPMISTVGMKFDLSNDFMSKEFVEFLYNEG 72
           EHS K + N       ++  EL+    IW     S V  KF++SND M +EF  FL++EG
Sbjct: 91  EHSSKFEHNTHNTPHLQTLFELS--TKIW----GSMVCSKFEVSNDLMCEEFDGFLFHEG 150

Query: 73  VDVDLMDSERVRDLKRKYGEVEICRSEYEYKQAKLCTKLEKLKCQHYQTALQKF 127
           VDV+L++SERVR +KRK+GEV++CRS +EYKQAKL   +E+LK  HY  AL KF
Sbjct: 151 VDVELLESERVRSMKRKFGEVQLCRSRFEYKQAKLAKNMERLKYDHYNRALVKF 198

[Close]
BLAST of Cla97C08G144650 vs. NCBI nr
Match: XP_022951916.1 (STOREKEEPER protein-like [Cucurbita moschata])

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-14
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0 

Query: 13  EHSKKKKKNKKERKKNKSRKELNGDENIWLCPMISTVGMKFDLSNDFMSKEFVEFLYNEG 72
           EHS K + N       ++  EL+    IW     S V  KF++SND M +EF  FL++EG
Sbjct: 91  EHSSKFEHNTHNTPHLQTLFELS--TKIW----GSMVCSKFEVSNDLMCEEFDGFLFHEG 150

Query: 73  VDVDLMDSERVRDLKRKYGEVEICRSEYEYKQAKLCTKLEKLKCQHYQTALQKF 127
           VDV+L++SERVR +KRK+GEV++CRS +EYKQAKL   +E+LK  HY  AL KF
Sbjct: 151 VDVELLESERVRSMKRKFGEVQLCRSRFEYKQAKLAKNMERLKYDHYNRALVKF 198

[Close]
BLAST of Cla97C08G144650 vs. NCBI nr
Match: XP_023521142.1 (STOREKEEPER protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.1 bits (209), Expect = 4.7e-13
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0 

Query: 10  EKKEHSKKKKKNKKERKKNKSRKELNGDENIWLCPMI--------STVGMKFDLSNDFMS 69
           ++ + S K  + KK+  +N S+ E N      L  +         S V  KF++SND M 
Sbjct: 74  KQSQVSDKICRLKKKFMENSSKFEHNTHNTPHLQTLFELSTKIWGSMVCSKFEVSNDLMC 133

Query: 70  KEFVEFLYNEGVDVDLMDSERVRDLKRKYGEVEICRSEYEYKQAKLCTKLEKLKCQHYQT 127
           +EF  FL++EGVDV+L++SERVR +KRK+GEV++CRS +EYKQAKL   +E+LK  HY  
Sbjct: 134 EEFDGFLFHEGVDVELLESERVRSMKRKFGEVQLCRSRFEYKQAKLAKNMERLKYDHYNR 193

[Close]
BLAST of Cla97C08G144650 vs. ExPASy TrEMBL
Match: A0A6J1GIT7 (STOREKEEPER protein-like OS=Cucurbita moschata OX=3662 GN=LOC111454656 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0 

Query: 13  EHSKKKKKNKKERKKNKSRKELNGDENIWLCPMISTVGMKFDLSNDFMSKEFVEFLYNEG 72
           EHS K + N       ++  EL+    IW     S V  KF++SND M +EF  FL++EG
Sbjct: 91  EHSSKFEHNTHNTPHLQTLFELS--TKIW----GSMVCSKFEVSNDLMCEEFDGFLFHEG 150

Query: 73  VDVDLMDSERVRDLKRKYGEVEICRSEYEYKQAKLCTKLEKLKCQHYQTALQKF 127
           VDV+L++SERVR +KRK+GEV++CRS +EYKQAKL   +E+LK  HY  AL KF
Sbjct: 151 VDVELLESERVRSMKRKFGEVQLCRSRFEYKQAKLAKNMERLKYDHYNRALVKF 198

The following BLAST results are available for this feature:
BLAST of Cla97C08G144650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585874.12.5e-1450.00STOREKEEPER protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022951916.12.5e-1450.00STOREKEEPER protein-like [Cucurbita moschata][more]
XP_023521142.14.7e-1345.60STOREKEEPER protein-like [Cucurbita pepo subsp. pepo][more]
BLAST of Cla97C08G144650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C08G144650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GIT71.2e-1450.00STOREKEEPER protein-like OS=Cucurbita moschata OX=3662 GN=LOC111454656 PE=3 SV=1[more]
BLAST of Cla97C08G144650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G144650.1Cla97C08G144650.1mRNA