Cla97C07G143770 (gene) Watermelon (97103) v2.5

Overview
NameCla97C07G143770
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr07: 31284397 .. 31285016 (+)
RNA-Seq ExpressionCla97C07G143770
SyntenyCla97C07G143770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTATTTATATCCTCACAAAACACACCAAGAAATGCAATAGAAAAATTATTCTTGTGCTGCAATATCCAAAAATGGCTTCTAACAGATCTCTCATTTGGCAACTGCTTTTGGTTTTAATTGCCATTCTAAGTTATAGTGTTGCTGCAAGGAATTGGGCTTCTGCTCCTCAAACTGCTTGTAAGTAGATCTTATATGCCTATTTCTTGTTGATGGATTGTTTAGGGGGAAAACCATTTTCAATTTTAGTCAAAATTTAGGGAAAAAAAATGATTTTATAATTAATGTACTTTCTTTTCTATTATTCATGTGTTTGGAGTTGTCCCTCTCAAGCAATCCGATAAAATCGAAACGATATAGAGAAGATTAGTGTAGCTTCTATGCATGGATGATACGTAAAAAATCGAAAAATATTCTAAGTTATTTTCGAAAAAAATCATGTGTTAGAGTGATATAGATCATACTTTCCCACTATAAATAGGTTTCAATCTAATTTTTTTTTATTTTTCTTCTTTTCTTATGATCTTTTTCAGACAAGGATGGTGTGGGTATCAAAAGCATAAAAAGGGTTACTAAACCTATTCCAAGGAAAGATAAACCTCGGGGTGGAAATTTCTAA

mRNA sequence

ATGTGTATTTATATCCTCACAAAACACACCAAGAAATGCAATAGAAAAATTATTCTTGTGCTGCAATATCCAAAAATGGCTTCTAACAGATCTCTCATTTGGCAACTGCTTTTGGTTTTAATTGCCATTCTAAGTTATAGTGTTGCTGCAAGGAATTGGGCTTCTGCTCCTCAAACTGCTTACAAGGATGGTGTGGGTATCAAAAGCATAAAAAGGGTTACTAAACCTATTCCAAGGAAAGATAAACCTCGGGGTGGAAATTTCTAA

Coding sequence (CDS)

ATGTGTATTTATATCCTCACAAAACACACCAAGAAATGCAATAGAAAAATTATTCTTGTGCTGCAATATCCAAAAATGGCTTCTAACAGATCTCTCATTTGGCAACTGCTTTTGGTTTTAATTGCCATTCTAAGTTATAGTGTTGCTGCAAGGAATTGGGCTTCTGCTCCTCAAACTGCTTACAAGGATGGTGTGGGTATCAAAAGCATAAAAAGGGTTACTAAACCTATTCCAAGGAAAGATAAACCTCGGGGTGGAAATTTCTAA

Protein sequence

MCIYILTKHTKKCNRKIILVLQYPKMASNRSLIWQLLLVLIAILSYSVAARNWASAPQTAYKDGVGIKSIKRVTKPIPRKDKPRGGNF
Homology
[Close]
BLAST of Cla97C07G143770 vs. NCBI nr
Match: KGN53139.1 (hypothetical protein Csa_015279 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 7.0e-16
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 26 MASNRSLIWQLLLVLIAILSYSVAARNWASAPQTAYKDGVGIKSIKRVTKPIPRKDKPRG 85
          MAS  SLIWQL++VL+AILS SVAAR+  S PQTAYKD VGIKSIK+V KP+P+KDKPRG
Sbjct: 1  MASKISLIWQLVVVLMAILSCSVAARHRVSTPQTAYKDAVGIKSIKKVFKPVPKKDKPRG 60

Query: 86 GNF 89
          GN+
Sbjct: 61 GNY 63

[Close]
BLAST of Cla97C07G143770 vs. ExPASy TrEMBL
Match: A0A0A0KW87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022260 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 26 MASNRSLIWQLLLVLIAILSYSVAARNWASAPQTAYKDGVGIKSIKRVTKPIPRKDKPRG 85
          MAS  SLIWQL++VL+AILS SVAAR+  S PQTAYKD VGIKSIK+V KP+P+KDKPRG
Sbjct: 1  MASKISLIWQLVVVLMAILSCSVAARHRVSTPQTAYKDAVGIKSIKKVFKPVPKKDKPRG 60

Query: 86 GNF 89
          GN+
Sbjct: 61 GNY 63

The following BLAST results are available for this feature:
BLAST of Cla97C07G143770 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53139.17.0e-1674.60hypothetical protein Csa_015279 [Cucumis sativus][more]
BLAST of Cla97C07G143770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C07G143770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW873.4e-1674.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022260 PE=4 SV=1[more]
BLAST of Cla97C07G143770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G143770.1Cla97C07G143770.1mRNA