Cla97C07G142440 (gene) Watermelon (97103) v2.5

Overview
NameCla97C07G142440
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionProtein of unknown function (DUF 3339)
LocationCla97Chr07: 30002062 .. 30002268 (-)
RNA-Seq ExpressionCla97C07G142440
SyntenyCla97C07G142440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTGGGGGCCAGTGGCTGTAGCTGTGATTTTGTTCATTCTTCTATCTCCAGGGCTTCTGTTTCAAGTCCATGGCGCCGAAAAGTTCATCGAGTTCGGAAACTTCGAAACAAGCGCTACCTCTATTTTTCTTCACTCTCTCATCTTCTTCGCTCTCTTTTGTCTCTTCACTCTCGTCATTCATCTTCATATCTACATCTAA

mRNA sequence

ATGGCGGATTGGGGGCCAGTGGCTGTAGCTGTGATTTTGTTCATTCTTCTATCTCCAGGGCTTCTGTTTCAAGTCCATGGCGCCGAAAAGTTCATCGAGTTCGGAAACTTCGAAACAAGCGCTACCTCTATTTTTCTTCACTCTCTCATCTTCTTCGCTCTCTTTTGTCTCTTCACTCTCGTCATTCATCTTCATATCTACATCTAA

Coding sequence (CDS)

ATGGCGGATTGGGGGCCAGTGGCTGTAGCTGTGATTTTGTTCATTCTTCTATCTCCAGGGCTTCTGTTTCAAGTCCATGGCGCCGAAAAGTTCATCGAGTTCGGAAACTTCGAAACAAGCGCTACCTCTATTTTTCTTCACTCTCTCATCTTCTTCGCTCTCTTTTGTCTCTTCACTCTCGTCATTCATCTTCATATCTACATCTAA

Protein sequence

MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTLVIHLHIYI
Homology
[Close]
BLAST of Cla97C07G142440 vs. NCBI nr
Match: XP_038907108.1 (uncharacterized protein LOC120092931 [Benincasa hispida])

HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 1  MADWGPVFVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VIHLHIYI 69
          VIHLHIYI
Sbjct: 61 VIHLHIYI 68

[Close]
BLAST of Cla97C07G142440 vs. NCBI nr
Match: XP_022972134.1 (uncharacterized protein LOC111470766 [Cucurbita maxima])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 63/68 (92.65%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAVILFILLSPGLLFQVHGA+KFI+FGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 12 MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 71

Query: 61 VIHLHIYI 69
          V+HLHIY+
Sbjct: 72 VLHLHIYV 79

[Close]
BLAST of Cla97C07G142440 vs. NCBI nr
Match: XP_022932695.1 (uncharacterized protein LOC111439164 [Cucurbita moschata] >XP_023539088.1 uncharacterized protein LOC111799840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 63/68 (92.65%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAVILFILLSPGLLFQVHGA+KFI+FGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 1  MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VIHLHIYI 69
          V+HLHIY+
Sbjct: 61 VLHLHIYV 68

[Close]
BLAST of Cla97C07G142440 vs. NCBI nr
Match: KAG7018460.1 (hypothetical protein SDJN02_20328, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.6 bits (309), Expect = 6.4e-25
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAV+LFILLSPGL+ QVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 1  MADWGPVVVAVVLFILLSPGLVVQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VIHLHIYI 69
          V+HLHIYI
Sbjct: 61 VLHLHIYI 68

[Close]
BLAST of Cla97C07G142440 vs. NCBI nr
Match: KAG6582034.1 (hypothetical protein SDJN03_22036, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 6.4e-25
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAV+LFILLSPGL+ QVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 18 MADWGPVVVAVVLFILLSPGLVVQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 77

Query: 61 VIHLHIYI 69
          V+HLHIYI
Sbjct: 78 VLHLHIYI 85

[Close]
BLAST of Cla97C07G142440 vs. ExPASy TrEMBL
Match: A0A6J1IAL9 (uncharacterized protein LOC111470766 OS=Cucurbita maxima OX=3661 GN=LOC111470766 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 63/68 (92.65%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAVILFILLSPGLLFQVHGA+KFI+FGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 12 MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 71

Query: 61 VIHLHIYI 69
          V+HLHIY+
Sbjct: 72 VLHLHIYV 79

[Close]
BLAST of Cla97C07G142440 vs. ExPASy TrEMBL
Match: A0A6J1F2V4 (uncharacterized protein LOC111439164 OS=Cucurbita moschata OX=3662 GN=LOC111439164 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 63/68 (92.65%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAVILFILLSPGLLFQVHGA+KFI+FGNFETSATSIFLHSLIFFALFCLFTL
Sbjct: 1  MADWGPVLVAVILFILLSPGLLFQVHGADKFIQFGNFETSATSIFLHSLIFFALFCLFTL 60

Query: 61 VIHLHIYI 69
          V+HLHIY+
Sbjct: 61 VLHLHIYV 68

[Close]
BLAST of Cla97C07G142440 vs. ExPASy TrEMBL
Match: A0A6J1CVS1 (uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014687 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.3e-19
Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAV+LF+LLSPGLLFQV G  +F+EFGNF TS  SIF+HSLIFFAL CLFT 
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 60

Query: 61 VIHLHIYI 69
          V+ LHIYI
Sbjct: 61 VVQLHIYI 68

[Close]
BLAST of Cla97C07G142440 vs. ExPASy TrEMBL
Match: A0A6J1I7P7 (uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAV+LF+LLSPGLLFQV G   FI+FGNF+TS  SIF+HSLIFFAL CLFT 
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIHLHIYI 69
          V+ LHIY+
Sbjct: 61 VLQLHIYL 68

[Close]
BLAST of Cla97C07G142440 vs. ExPASy TrEMBL
Match: A0A6J1EXQ9 (uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC111439163 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAV+LF+LLSPGLLFQV G   FI+FGNF+TS  SIF+HSLIFFAL CLFT 
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIHLHIYI 69
          V+ LHIY+
Sbjct: 61 VLQLHIYL 68

[Close]
BLAST of Cla97C07G142440 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 90.9 bits (224), Expect = 4.3e-19
Identity = 41/68 (60.29%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          M+DWGPV V VILF++L+PGLLFQ+ G +K++EFGNF+TSA S+ +HSL++F+L C+F L
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 VIHLHIYI 69
           + +HIYI
Sbjct: 61 ALKIHIYI 68

[Close]
BLAST of Cla97C07G142440 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-17
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV VAVILF+LL+PGLLFQ+    + +EFGN +TS  SI +H++IFF L  +FT+
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 VIHLHIY 68
           I LHIY
Sbjct: 61 AIRLHIY 67

[Close]
BLAST of Cla97C07G142440 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 83.6 bits (205), Expect = 6.8e-17
Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          MADWGPV +AVILF++LSPGLLFQ+    + +EFGN +TS  SI +H++IFF L  +FT+
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 VIHLHIY 68
           I++HIY
Sbjct: 61 AINVHIY 67

[Close]
BLAST of Cla97C07G142440 vs. TAIR 10
Match: AT3G01950.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 3  DWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTLVI 62
          DWGPV ++VI FI+LSPG+LFQ+ G  K +EFG F+TS  SI +H+L+FFA   +  + +
Sbjct: 4  DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63

Query: 63 HLHIY 68
          H+HIY
Sbjct: 64 HIHIY 68

[Close]
BLAST of Cla97C07G142440 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 1  MADWGPVAVAVILFILLSPGLLFQVHGAEKFIEFGNFETSATSIFLHSLIFFALFCLFTL 60
          M DWGPV VAV LF+LL+PGLL QV G  + +EFG F+TS  S+ +H+LI+F L C+  L
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 VIHLHI 67
           + +HI
Sbjct: 61 ALQIHI 66

The following BLAST results are available for this feature:
BLAST of Cla97C07G142440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038907108.13.4e-2698.53uncharacterized protein LOC120092931 [Benincasa hispida][more]
XP_022972134.12.9e-2592.65uncharacterized protein LOC111470766 [Cucurbita maxima][more]
XP_022932695.12.9e-2592.65uncharacterized protein LOC111439164 [Cucurbita moschata] >XP_023539088.1 unchar... [more]
KAG7018460.16.4e-2592.65hypothetical protein SDJN02_20328, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6582034.16.4e-2592.65hypothetical protein SDJN03_22036, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cla97C07G142440 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C07G142440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IAL91.4e-2592.65uncharacterized protein LOC111470766 OS=Cucurbita maxima OX=3661 GN=LOC111470766... [more]
A0A6J1F2V41.4e-2592.65uncharacterized protein LOC111439164 OS=Cucurbita moschata OX=3662 GN=LOC1114391... [more]
A0A6J1CVS14.3e-1976.47uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1I7P71.6e-1875.00uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767... [more]
A0A6J1EXQ91.6e-1875.00uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC1114391... [more]
BLAST of Cla97C07G142440 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08391.14.3e-1960.29Protein of unknown function (DUF 3339) [more]
AT3G48660.13.1e-1761.19Protein of unknown function (DUF 3339) [more]
AT5G63500.16.8e-1758.21Protein of unknown function (DUF 3339) [more]
AT3G01950.11.9e-1453.85Protein of unknown function (DUF 3339) [more]
AT3G27030.11.9e-1454.55unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 1..67
e-value: 5.4E-30
score: 103.4
IPR021775Protein of unknown function DUF3339PANTHERPTHR33128OS05G0103400 PROTEINcoord: 1..68
NoneNo IPR availablePANTHERPTHR33128:SF55PROTEIN, PUTATIVE (DUF 3339)-RELATEDcoord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G142440.1Cla97C07G142440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane