Cla97C07G142230 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G142230
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Membrane-associated 30 kDa protein
Location	Cla97Chr07: 29774992 .. 29775222 (-)
RNA-Seq Expression	Cla97C07G142230
Synteny	Cla97C07G142230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCAAAAGATTACTACCATTTTGATTGTTTGTGTGGTATTCAGTATTGTTTTGAGTCAGATAAGTATAGCTGATGCAGCTCGAGTGCTCCCAGAGACTTCAAGTGATCATGGTGTTGATTATGTCGACCCATATTCGATAGTTTATCACAAAGCGAAGAAAACTGTCTCGTGTTGGCTTGGAAAGTTGTCTTCTGGACCAAGTCCTAGTGGCCCAGGCCACTAG

mRNA sequence

ATGAAGTTTCAAAAGATTACTACCATTTTGATTGTTTGTGTGGTATTCAGTATTGTTTTGAGTCAGATAAGTATAGCTGATGCAGCTCGAGTGCTCCCAGAGACTTCAAGTGATCATGGTGTTGATTATGTCGACCCATATTCGATAGTTTATCACAAAGCGAAGAAAACTGTCTCGTGTTGGCTTGGAAAGTTGTCTTCTGGACCAAGTCCTAGTGGCCCAGGCCACTAG

Coding sequence (CDS)

ATGAAGTTTCAAAAGATTACTACCATTTTGATTGTTTGTGTGGTATTCAGTATTGTTTTGAGTCAGATAAGTATAGCTGATGCAGCTCGAGTGCTCCCAGAGACTTCAAGTGATCATGGTGTTGATTATGTCGACCCATATTCGATAGTTTATCACAAAGCGAAGAAAACTGTCTCGTGTTGGCTTGGAAAGTTGTCTTCTGGACCAAGTCCTAGTGGCCCAGGCCACTAG

Protein sequence

MKFQKITTILIVCVVFSIVLSQISIADAARVLPETSSDHGVDYVDPYSIVYHKAKKTVSCWLGKLSSGPSPSGPGH

Homology

[Close]

BLAST of Cla97C07G142230 vs. NCBI nr
Match: KAG7018440.1 (hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVLPETSSDHGVDYVDPYSIVYHKAKKTVSC 60
          MKFQKI +  IVCVVF I+LSQIS  DAARVL ET S+HGVDY+DPYSIVY KAK+TVSC
Sbjct: 11 MKFQKIRSFFIVCVVFGIILSQISTIDAARVLSET-SNHGVDYIDPYSIVYQKAKETVSC 70

Query: 61 WLGKLSSGPSPSGPGH 77
          WLGKLSSGPSPSGPGH
Sbjct: 71 WLGKLSSGPSPSGPGH 85

[Close]

BLAST of Cla97C07G142230 vs. NCBI nr
Match: KGN53025.1 (hypothetical protein Csa_015299 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 3.0e-23
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVL----PETSSDHGVDY-VDPYSIVYHKAK 60
          MKFQKITT+LIVCV+  +VLSQI++ADAAR+L    P    DHGVDY +DPYSIVY KAK
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPRDDHDHGVDYHIDPYSIVYQKAK 61

Query: 61 KTVSCWLGKLSSGPSPSGPGH 77
          +++SCWLGKLSSGPSPSGPGH
Sbjct: 62 ESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of Cla97C07G142230 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 9.4e-17
Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVLPET-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+CVVF IV S I   DAAR+L ET   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of Cla97C07G142230 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVLPET-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+C+VF IV S I   DAAR+L ET   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of Cla97C07G142230 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.8e-15
Identity = 52/79 (65.82%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISI--ADAARVLPET-SSDHGVDYVDPYSIVYHKAKKT 60
          MKFQKI  +LIVCVVF IV S I I   DAAR+L ET   DH VD VDPYSI +HKAK +
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VSCWLGKLSSGPSPSGPGH 77
          V CWL  L SGPS  GPGH
Sbjct: 61 VKCWLENLGSGPSLKGPGH 79

[Close]

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL
Match: A0A0A0KTV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVL----PETSSDHGVDY-VDPYSIVYHKAK 60
          MKFQKITT+LIVCV+  +VLSQI++ADAAR+L    P    DHGVDY +DPYSIVY KAK
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPRDDHDHGVDYHIDPYSIVYQKAK 61

Query: 61 KTVSCWLGKLSSGPSPSGPGH 77
          +++SCWLGKLSSGPSPSGPGH
Sbjct: 62 ESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.5e-17
Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVLPET-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+CVVF IV S I   DAAR+L ET   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVLPET-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+C+VF IV S I   DAAR+L ET   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.6e-16
Identity = 52/79 (65.82%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISI--ADAARVLPET-SSDHGVDYVDPYSIVYHKAKKT 60
          MKFQKI  +LIVCVVF IV S I I   DAAR+L ET   DH VD VDPYSI +HKAK +
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VSCWLGKLSSGPSPSGPGH 77
          V CWL  L SGPS  GPGH
Sbjct: 61 VKCWLENLGSGPSLKGPGH 79

[Close]

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL
Match: A0A2P2J3U6 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-11
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISIADAARVLPETSSDHGVDYVDPYSIVYHKAKKTVSC 60
          M FQK+ T+ +V V+   +LSQ+ + +AAR LPE  +  G  +++ YS VY KAK T++C
Sbjct: 1  MSFQKVATLFLVFVISLAILSQVKV-EAARALPEDFA--GAAHLETYSSVYEKAKNTMAC 60

Query: 61 WLGKLSSGPSPSGPGH 77
          WLG+L+SGPSP GPGH
Sbjct: 61 WLGRLASGPSPKGPGH 73

The following BLAST results are available for this feature:

BLAST of Cla97C07G142230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018440.1	1.2e-24	81.58	hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN53025.1	3.0e-23	72.84	hypothetical protein Csa_015299 [Cucumis sativus]	[more]
KAA0043548.1	9.4e-17	63.64	hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]	[more]
TYK02483.1	2.1e-16	62.34	hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]	[more]
KAA0043550.1	1.8e-15	65.82	hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]	[more]

BLAST of Cla97C07G142230 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTV4	1.5e-23	72.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1	[more]
A0A5A7TL44	4.5e-17	63.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BS33	1.0e-16	62.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJV8	8.6e-16	65.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A2P2J3U6	1.3e-11	51.32	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of Cla97C07G142230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..76
IPR040273	PAMP-induced secreted peptide 1	PANTHER	PTHR37245	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G142230.1	Cla97C07G142230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response