Cla97C07G140910 (gene) Watermelon (97103) v2.5

Overview
NameCla97C07G140910
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr07: 28703708 .. 28705317 (-)
RNA-Seq ExpressionCla97C07G140910
SyntenyCla97C07G140910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGTTAGTTCAAATGACGAAGTTATACTAGAAAAGCAGGTAGATAGAGCACCCAAGATCCACATAAGTGCAAGTTTTCCGTGCGAACAAATATAATAGTAATTTCTACACTCTTATGGTAGTGTAATACATGTAACACTAATAGGAGTAATTTAAAATATTTGAATGAAAAAGACAAACATTGGAGCTGAGGTCATTGGATTAGCATTTCAAAACTATGATATTGGAAATGCACAACAAATAAAAAAGAATAATGGTGAGTATGAAACATCCAAAAGAGAGTATATATATATTATGACAAAGAAAATAAACAAAAATGTAGAACAGGCAATACCATCCACAAAAACAAAAGTTTAAAAATATCGACTTAAAGAAAAAAGATGGACCCCATTAGATCGAACTAGTTGCATGCATATATAAGGTCACCCTTGCATATATTTAATTGTGTTTAACTTTAACCTATGTGGGAAAAAAAATATTGTTTATTATATTTAGTAGATATGTTTCTTTATCAAACGGATATTTGATTGTTTCAATTCCTTTAAATAATTGAGTATATTTTTATTAAAAGTTAACATATTAAAGTAACCATAAATTATAATATTACGAAAATAAAAATGGAAAAACACCTATTTACATAAAACTTATATAATAAAACTGCAATAGACTATTTTATAATAGCCAAAATGCATGTTAATATAAATTTTAAAAACTCTGTCTCTTACATTTAATTTCCATTTAATTATAAATAACTGTCTATCATATTATAGAAGCGCCCTTATCAAATAATTTCTCCACAAAATAGACCCATTAAACTAATATAATTTTTAAAATAAGATGTCATGACTATGATATTATGAAACTAAAAATTTAAGGATAAAATTAATTATGAGAATTTTAATTTTGTAACAATTTAAAATTATTTAATAATTATCTTTAACTACCAAAGGTGAATTTCAAGTTATACATAAGTCGTTTCTACTTCGATTTGAACAAAAATTAGAATGGATATATGACGGATTGTGTCTGCTAAATCTGTGTCTATGCTTCATAGTCTAAAATAGTTTAGGGAAAGGATTAAGGTTTAGGACGCGTTGGGTATCCTTTTTACGTTATTTCAGGTAAATTCAAAAGGGTAATAAGGTAATTTCAAACTATCCACTTCCAGGACCTCAAGCAATGTTCGAGAACACAGAGATTACTAGAAAATCACAGAATCAACTCTCGCTGTGTTCTTCTTCTCACTTTCACTTTCTCCACCAAAGGTATGAGTCCTTCTCCTTCAAAATTAGGTTCATGGGTTCCTATTATTGATTTCTTCAATTTTACCTCTCGCTTTAATTCCTATTTTCTTCTTTTCTTTTCCTTTCAATTTCGATGAATTTCTCACTACTGTATTGCAATTTTATATTCTCCTGCAGTGCCTCTTGGTTGAACTTTGATTGAATTTTTGGTCTGTTTGCTTTTTTTCTCTAGTTTTTCTGCTGAATGTTCGTGAAATTTGTACTTTTTGGCAAGTTCGTTTGATTGCGTACAGAGAAAGCTTGGCGTGTCTCTCATCGTTTGGAAAGGGGAAGAAAACCTTAGTAGCTGAAGAATTCGCCTAA

mRNA sequence

ATGCATGTTAGTTCAAATGACGAAGTTATACTAGAAAAGCAGGACCTCAAGCAATGTTCGAGAACACAGAGATTACTAGAAAATCACAGAATCAACTCTCGCTGTGTTCTTCTTCTCACTTTCACTTTCTCCACCAAAGTTTTTCTGCTGAATGTTCGTGAAATTTGTACTTTTTGGCAAGTTCGTTTGATTGCGTACAGAGAAAGCTTGGCGTGTCTCTCATCGTTTGGAAAGGGGAAGAAAACCTTAGTAGCTGAAGAATTCGCCTAA

Coding sequence (CDS)

ATGCATGTTAGTTCAAATGACGAAGTTATACTAGAAAAGCAGGACCTCAAGCAATGTTCGAGAACACAGAGATTACTAGAAAATCACAGAATCAACTCTCGCTGTGTTCTTCTTCTCACTTTCACTTTCTCCACCAAAGTTTTTCTGCTGAATGTTCGTGAAATTTGTACTTTTTGGCAAGTTCGTTTGATTGCGTACAGAGAAAGCTTGGCGTGTCTCTCATCGTTTGGAAAGGGGAAGAAAACCTTAGTAGCTGAAGAATTCGCCTAA

Protein sequence

MHVSSNDEVILEKQDLKQCSRTQRLLENHRINSRCVLLLTFTFSTKVFLLNVREICTFWQVRLIAYRESLACLSSFGKGKKTLVAEEFA
Homology
[Close]
BLAST of Cla97C07G140910 vs. NCBI nr
Match: KAG6581810.1 (hypothetical protein SDJN03_21812, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.1 bits (157), Expect = 3.5e-07
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 8  EVILEKQDLKQCSRTQRLLENHRINSRCVLLLTFTFSTKVFLLNVREICTFWQVRLIAYR 67
          + IL + ++ + S+ QR L +              F  +VFLLN+R ICT   + LIAYR
Sbjct: 12 QAILRRTEITRKSQNQRSLRS-----------ASHFLLQVFLLNIRGICTLCYIHLIAYR 71

Query: 68 ESLACLSSFGKGKKTLVAEEFA 90
          +SLAC+ SF KGKK LVAEEFA
Sbjct: 72 KSLACVESFEKGKKILVAEEFA 82

[Close]
BLAST of Cla97C07G140910 vs. NCBI nr
Match: KAG7018259.1 (hypothetical protein SDJN02_20127, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.1 bits (157), Expect = 3.5e-07
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 8  EVILEKQDLKQCSRTQRLLENHRINSRCVLLLTFTFSTKVFLLNVREICTFWQVRLIAYR 67
          + IL + ++ + S+ QR L +              F  +VFLLN+R ICT   + LIAYR
Sbjct: 4  QAILRRTEITRKSQNQRSLRS-----------ASHFLLQVFLLNIRGICTLCYIHLIAYR 63

Query: 68 ESLACLSSFGKGKKTLVAEEFA 90
          +SLAC+ SF KGKK LVAEEFA
Sbjct: 64 KSLACVESFEKGKKILVAEEFA 74

The following BLAST results are available for this feature:
BLAST of Cla97C07G140910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581810.13.5e-0746.34hypothetical protein SDJN03_21812, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7018259.13.5e-0746.34hypothetical protein SDJN02_20127, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cla97C07G140910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C07G140910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C07G140910 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G140910.2Cla97C07G140910.2mRNA