Cla97C07G139560 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G139560
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Peptide deformylase
Location	Cla97Chr07: 27349508 .. 27351697 (+)
RNA-Seq Expression	Cla97C07G139560
Synteny	Cla97C07G139560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCTTTAATTTTGCTATTTATGAAGAATAAAGAAAAAAGGAAAAAAAAAAGTGTGTTAAAGCCCGAAGAATACTCTCTTCGCCGGAGGTGGAGCACTGTGGAAACTGAAATGGAGACCAGTTACCGATTCTCCTTCCGTCTATTCCCTATCTCTCTTGCCGAAAGGTGTCTCAAGCCTTCTTCACCCGCACCCAATTTTCGAAAACTCATTTACAGAGCCACTTGTTTATCGTACAACTTTCCAAAATTCATTCCGGCCCCCAAAACCTACAGTTTTTCTTCAACTTCAATTGCGAAAGCCGGTTGGTTTCTGGGTCTCGGAGAGCAGAAGAAACTGAGCTTACCGACGATTGTGAAGGCTGGAGACCCAGTTCTGCACGAACCTGCTCGTGAGGTTGATCCTAAGGAAATAGGGTCGGAGAAGATTCAGAAGATAATCGACGATATGGTTCTGGCCATGAGGAAGGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGGTCAGTGGAAATTACTTCTGGGTTTAATCGTCACTCTGTTTTTATTTTATTTTATTTTATTTTTATTATCTGTTTGCTATGTGAATTGGAAATGTGAGATTTAGTAGCTGAAATGGTGATTGATTTCTCCATTTTTCTTGTTTTTGGGGCTGTTTTAAATCGGGTTTCTTTGAGTTTTCGAAATGTGAAATCTTATTGAAAAACCTTGGATTTGGATTCAATATGAAGTATTTTGTTGGGCATTTGTTGTAGATAATTGTTTTGGAAGACACTAAAGAATATATCAGTTATGCACCCAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTATGGTTATATATTAATGAGAAACCAAATTGAATTTGTATCTGTGTTTTTATGTTCACCAATTTTCACTTCACAATTTGTTAGTTCTATTGAGCCAGGTGATCATAAACCCAAAGCTAAAAAGTAAAAGCAACAAGACTGCATTGTTTTTTGAAGGGTGCCTAAGGTAAGATGCAGATTTCCAGTCCATTTTTTTTTTCTCTCTCTGAAGTAGTTTGCAACCAATTTGTTCTTTCTTTCCCTTTCCCCCTTTCTTTCTTGTATGCTTTCAAGCTCCATCTTGCCAATTTGTGAAATGGAAAATGAAATTCCAAAGTAAAATCTTGATTATTTCTTAAATATTAACGGACTTTCTCTTTATCCTAGAAAATATGTGTAGCGAGTGAATCCATATGCTTTTGAATACATGTTCCATCATTCAATATAAATGATGCCATAGTAGTGTTGTTTATCTACACTTTGATATTATAGTTTGTGAGAAATGTGAGCTGTTTAGTCCCTTCTTTCAGATTAGTTTTCTTTTTAACAGATTGTTTCCAGTTGAAGCTGTATCTGAAGTCTATTCTTTACTATAATTGGTGAAATGGCTGTTGTTTATTTAAGGAATTTTTCCGCTACTTGTGTGTCTCCTTCCATGCCATCCATTTTTTATTCCTTTATTCTTTTACCTTGTAGTGTTGATGGATTTAGAGCAGTGGTCGAGCGCTATCTTGATGTTGAGGTAACTGGTCTCGATCGAGATGGGAGTCCTATCAAGGTGGATGCTTCAGGTTGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGATGGAACTCTTTATGTGGACAAGATGGTGCCTCGGACATTCAGAGCAGCTGAAAATTTGACTTTACCTCTTGCTGAGGGTTGCCCCAAGCTGGGAGCTCGCTAACACCAGCCTGCACTATTGTCAGCCCCAAGTTCGTTAACGTTGGATATCAGACAAGAAGGAATGAAGGAGATTCAGAGCATTGGAGTTTAACTGGATCTTTTTTATTTAATTTCTTGCACTGCATTGAGGTAAGTGTTTCTTTTGTTCAATTGAAATATACGCTCTCTTGATGTATGTCTCTGCATTTGATTGGAAATGCAAGCAATGAGTTTTTCAAAGGGTTCTCTTTCTCTCATGTAATAGTGAAAAGATATCAGAGATTATGTTACAAATTTAGTCATTGAACTTAAGTTTTGAAAATGTCTAGTAAATTCCTAAACTTTCAATTTTGTGTTTAATAGGTCCTTGAAGTCTAAGAAGTGTCCTAATAGATTCTGATATGAAAACTCTAGAAATTTGTAAATTAGGAACCCCG

mRNA sequence

TAAACCTTTAATTTTGCTATTTATGAAGAATAAAGAAAAAAGGAAAAAAAAAAGTGTGTTAAAGCCCGAAGAATACTCTCTTCGCCGGAGGTGGAGCACTGTGGAAACTGAAATGGAGACCAGTTACCGATTCTCCTTCCGTCTATTCCCTATCTCTCTTGCCGAAAGGTGTCTCAAGCCTTCTTCACCCGCACCCAATTTTCGAAAACTCATTTACAGAGCCACTTGTTTATCGTACAACTTTCCAAAATTCATTCCGGCCCCCAAAACCTACAGTTTTTCTTCAACTTCAATTGCGAAAGCCGGTTGGTTTCTGGGTCTCGGAGAGCAGAAGAAACTGAGCTTACCGACGATTGTGAAGGCTGGAGACCCAGTTCTGCACGAACCTGCTCGTGAGGTTGATCCTAAGGAAATAGGGTCGGAGAAGATTCAGAAGATAATCGACGATATGGTTCTGGCCATGAGGAAGGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTAAAGAATATATCAGTTATGCACCCAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCATAAACCCAAAGCTAAAAAGTAAAAGCAACAAGACTGCATTGTTTTTTGAAGGGTGCCTAAGTGTTGATGGATTTAGAGCAGTGGTCGAGCGCTATCTTGATGTTGAGGTAACTGGTCTCGATCGAGATGGGAGTCCTATCAAGGTGGATGCTTCAGGTTGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGATGGAACTCTTTATGTGGACAAGATGGTGCCTCGGACATTCAGAGCAGCTGAAAATTTGACTTTACCTCTTGCTGAGGGTTGCCCCAAGCTGGGAGCTCGCTAACACCAGCCTGCACTATTGTCAGCCCCAAGTTCGTTAACGTTGGATATCAGACAAGAAGGAATGAAGGAGATTCAGAGCATTGGAGTTTAACTGGATCTTTTTTATTTAATTTCTTGCACTGCATTGAGGTAAGTGTTTCTTTTGTTCAATTGAAATATACGCTCTCTTGATGTATGTCTCTGCATTTGATTGGAAATGCAAGCAATGAGTTTTTCAAAGGGTTCTCTTTCTCTCATGTAATAGTGAAAAGATATCAGAGATTATGTTACAAATTTAGTCATTGAACTTAAGTTTTGAAAATGTCTAGTAAATTCCTAAACTTTCAATTTTGTGTTTAATAGGTCCTTGAAGTCTAAGAAGTGTCCTAATAGATTCTGATATGAAAACTCTAGAAATTTGTAAATTAGGAACCCCG

Coding sequence (CDS)

ATGAAGAATAAAGAAAAAAGGAAAAAAAAAAGTGTGTTAAAGCCCGAAGAATACTCTCTTCGCCGGAGGTGGAGCACTGTGGAAACTGAAATGGAGACCAGTTACCGATTCTCCTTCCGTCTATTCCCTATCTCTCTTGCCGAAAGGTGTCTCAAGCCTTCTTCACCCGCACCCAATTTTCGAAAACTCATTTACAGAGCCACTTGTTTATCGTACAACTTTCCAAAATTCATTCCGGCCCCCAAAACCTACAGTTTTTCTTCAACTTCAATTGCGAAAGCCGGTTGGTTTCTGGGTCTCGGAGAGCAGAAGAAACTGAGCTTACCGACGATTGTGAAGGCTGGAGACCCAGTTCTGCACGAACCTGCTCGTGAGGTTGATCCTAAGGAAATAGGGTCGGAGAAGATTCAGAAGATAATCGACGATATGGTTCTGGCCATGAGGAAGGCTCCTGGAGTGGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTAAAGAATATATCAGTTATGCACCCAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCATAAACCCAAAGCTAAAAAGTAAAAGCAACAAGACTGCATTGTTTTTTGAAGGGTGCCTAAGTGTTGATGGATTTAGAGCAGTGGTCGAGCGCTATCTTGATGTTGAGGTAACTGGTCTCGATCGAGATGGGAGTCCTATCAAGGTGGATGCTTCAGGTTGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGATGGAACTCTTTATGTGGACAAGATGGTGCCTCGGACATTCAGAGCAGCTGAAAATTTGACTTTACCTCTTGCTGAGGGTTGCCCCAAGCTGGGAGCTCGCTAA

Protein sequence

MKNKEKRKKKSVLKPEEYSLRRRWSTVETEMETSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLTLPLAEGCPKLGAR

Homology

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BLAST of Cla97C07G139560 vs. NCBI nr
Match: XP_038878019.1 (peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 495.4 bits (1274), Expect = 3.5e-136
Identity = 243/267 (91.01%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           MET +RFSFRLFPISLAERCLKPSSP PNFR  IYRA   S+N PKFIP  KTY  SSTS
Sbjct: 1   METIHRFSFRLFPISLAERCLKPSSPTPNFRNFIYRAISSSHNIPKFIPVLKTYRSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGE+KK+ LPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIID+MVLAMRKA
Sbjct: 61  IAKAGWFLGLGEKKKMGLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDNMVLAMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PG+GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGIGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGC+SVDGFRAVVERYL+VEV G DRDGSPIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCISVDGFRAVVERYLEVEVAGFDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR AENLTLPLAEGCPKLGAR
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGAR 267

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BLAST of Cla97C07G139560 vs. NCBI nr
Match: KAA0044431.1 (peptide deformylase 1A [Cucumis melo var. makuwa] >TYK29558.1 peptide deformylase 1A [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 5.1e-135
Identity = 243/267 (91.01%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           ME  +RFSFRLFPISLAERC KPS  APNFRKLI+R    S N PKFIPAPKTYS SSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAPKTYSSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVL MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVERYLDVE+ G DR+G+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR AENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

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BLAST of Cla97C07G139560 vs. NCBI nr
Match: XP_008454248.1 (PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 4.3e-134
Identity = 242/267 (90.64%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           ME  +RFSFRLFPISLAERC KPS  APNFRKLI+R    S N PKFIPA KTYS SSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAXKTYSSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVL MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVERYLDVE+ G DR+G+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR AENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of Cla97C07G139560 vs. NCBI nr
Match: XP_004152208.2 (peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus] >KGN52877.1 hypothetical protein Csa_015090 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 2.1e-133
Identity = 240/267 (89.89%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           ME  +RFSFRLFPISLAERC KPS   PNFRKLI+R    S N PKFIP PKTYS SSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVPKTYSSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+L MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVERYLDVEV G DRDG+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR  ENLTLPLAEGCPKLGAR
Sbjct: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 267

[Close]

BLAST of Cla97C07G139560 vs. NCBI nr
Match: XP_022153571.1 (peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 471.9 bits (1213), Expect = 4.2e-129
Identity = 236/270 (87.41%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNF---PKFIPAPKTYSFS 90
           M+T +RFSFRLFPISLA  CL PSS  P F KL +R T  S++F   PKF+P  +TYS S
Sbjct: 1   MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTS-SFDFDCIPKFVPPRQTYSSS 60

Query: 91  STSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM 150
           STSIAKAGWFLGLGEQKK+SLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM
Sbjct: 61  STSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM 120

Query: 151 RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSN 210
           RKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSN
Sbjct: 121 RKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSN 180

Query: 211 KTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTL 270
           KTALFFEGCLSVDGFRAVVER+LDVEV GLDRDG+PIKVDASGWQARILQHECDHLDGTL
Sbjct: 181 KTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTL 240

Query: 271 YVDKMVPRTFRAAENLTLPLAEGCPKLGAR 298
           YVDKM+PRTFR AENLTLPLAEGCPKLGAR
Sbjct: 241 YVDKMLPRTFRMAENLTLPLAEGCPKLGAR 269

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BLAST of Cla97C07G139560 vs. ExPASy Swiss-Prot
Match: Q9FV53 (Peptide deformylase 1A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PDF1A PE=1 SV=3)

HSP 1 Score: 355.5 bits (911), Expect = 5.7e-97
Identity = 186/270 (68.89%), Postives = 205/270 (75.93%), Query Frame = 0


Query: 29  TEMETSYRFSFRLFPISLAERCLKPSSPA--PNFRKLIYRATCLSYNFPKFIPAPKTYSF 88
           T MET +R S RL P+S A  C     P   P    L+ R     YN P         S 
Sbjct: 9   TAMETLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKL---YNLPT--------SS 68

Query: 89  SSTSIAKAGWFLGLGE-QKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVL 148
           SS+   KAGW LGLGE +KK+ LP IV +GDPVLHE AREVDP EIGSE+IQKIIDDM+ 
Sbjct: 69  SSSLSTKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIK 128

Query: 149 AMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSK 208
            MR APGVGLAAPQIG+PLRIIVLEDTKEYISYAPKEEI AQ+RR FDL+V++NP LK +
Sbjct: 129 VMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKER 188

Query: 209 SNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDG 268
           SNK ALFFEGCLSVDGFRA VERYL+V VTG DR G  I+V+ASGWQARILQHECDHLDG
Sbjct: 189 SNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDG 248

Query: 269 TLYVDKMVPRTFRAAENLTLPLAEGCPKLG 296
            LYVDKMVPRTFR  +NL LPLAEGCPKLG
Sbjct: 249 NLYVDKMVPRTFRTVDNLDLPLAEGCPKLG 267

[Close]

BLAST of Cla97C07G139560 vs. ExPASy Swiss-Prot
Match: Q9FUZ0 (Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1A PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.1e-95
Identity = 168/208 (80.77%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 88  STSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM 147
           S++ A+AGWFLGLGE+KK ++P IVKAGDPVLHEP++++  +EIGSE+IQKII++MV  M
Sbjct: 68  SSATARAGWFLGLGEKKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEMVKVM 127

Query: 148 RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSN 207
           R APGVGLAAPQIGIPL+IIVLEDT EYISYAPK+E KAQDRRPF LLVIINPKLK K N
Sbjct: 128 RNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVIINPKLKKKGN 187

Query: 208 KTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTL 267
           KTALFFEGCLSVDGFRAVVER+L+VEVTGLDR+G  IKVDASGWQARILQHE DHLDGTL
Sbjct: 188 KTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQHEYDHLDGTL 247

Query: 268 YVDKMVPRTFRAAENLTLPLAEGCPKLG 296
           YVDKM PRTFR  ENL LPLA GCPKLG
Sbjct: 248 YVDKMAPRTFRTVENLDLPLAAGCPKLG 275

[Close]

BLAST of Cla97C07G139560 vs. ExPASy Swiss-Prot
Match: B6RGY0 (Peptide deformylase 1A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PDF1A PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.2e-87
Identity = 165/265 (62.26%), Postives = 199/265 (75.09%), Query Frame = 0


Query: 41  LFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTSIAKAGWFLGL 100
           L P+S A   L P++P P         T ++ +  +  P  + +S    S    GW  GL
Sbjct: 5   LRPLSAAALLLSPAAPLP---------TAVAASARRASPGGRRWSSVRASAGGGGWLSGL 64

Query: 101 -------GEQKKLSL-PTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPG 160
                  G    +++ P  VKAGDPVLHEPA++V P +I SEK+Q +ID MV  MRKAPG
Sbjct: 65  LGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPG 124

Query: 161 VGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTALF 220
           VGLAAPQIG+PL+IIVLEDT+EYISYAPK++I+AQDRRPFDLLVIINPKLK+ S +TALF
Sbjct: 125 VGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALF 184

Query: 221 FEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVDKM 280
           FEGCLSVDG+RA+VER+LDVEV+GLDR+G PIKV+ASGWQARILQHECDHL+GTLYVD M
Sbjct: 185 FEGCLSVDGYRALVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTM 244

Query: 281 VPRTFRAAENLTLPLAEGCPKLGAR 298
           VPRTFR  +NL LPL  GCP +GAR
Sbjct: 245 VPRTFRIVDNLDLPLPVGCPPIGAR 260

[Close]

BLAST of Cla97C07G139560 vs. ExPASy Swiss-Prot
Match: Q7NJV3 (Peptide deformylase 1 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=def1 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.4e-40
Identity = 82/172 (47.67%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 111 IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLE 170
           IVK GDPVL   A+ ++  EI SE IQ++I  M   MR+APGVGLAAPQ+G+ ++++V+E
Sbjct: 48  IVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVIE 107

Query: 171 DTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 230
           D  EYI      E + ++R P    V+INP L  +  ++A+FFEGCLS+ G++ +V R  
Sbjct: 108 DRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVARAR 167

Query: 231 DVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAEN 283
            V V  LD   +P+ + A GW ARILQHE DHL+G L VD+M  +TF   EN
Sbjct: 168 VVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMDLQTFSTLEN 219

[Close]

BLAST of Cla97C07G139560 vs. ExPASy Swiss-Prot
Match: Q825U9 (Peptide deformylase 3 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=def3 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.6e-33
Identity = 77/186 (41.40%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 111 IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLE 170
           IV AGDPVL   A   D  ++G   + + ++ + L M  APGVGLAAPQ+G+ LRI V+E
Sbjct: 35  IVAAGDPVLRRGAEPYD-GQLGPGLLARFVEALRLTMHAAPGVGLAAPQVGVGLRIAVIE 94

Query: 171 DTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 230
           D     +  P+E    + R P    V++NP  ++  +  A FFEGCLSV G++AVV R  
Sbjct: 95  DP----APVPEEVGAVRGRVPQPFRVLVNPSYEAVGSDRAAFFEGCLSVPGWQAVVARPA 154

Query: 231 DVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLTLPLAEG 290
            V +T LD  G  +  + +GW ARI+QHE DHLDG LY+D+   R+  + E + L  ++ 
Sbjct: 155 RVRLTALDEHGRAVDEEFTGWPARIVQHETDHLDGMLYLDRAELRSLSSNEAMALRWSQP 214

Query: 291 CPKLGA 297
            P+  A
Sbjct: 215 TPERAA 215

[Close]

BLAST of Cla97C07G139560 vs. ExPASy TrEMBL
Match: A0A5D3E1C7 (Peptide deformylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001640 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.5e-135
Identity = 243/267 (91.01%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           ME  +RFSFRLFPISLAERC KPS  APNFRKLI+R    S N PKFIPAPKTYS SSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAPKTYSSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVL MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVERYLDVE+ G DR+G+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR AENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of Cla97C07G139560 vs. ExPASy TrEMBL
Match: A0A1S3BY63 (Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103494711 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-134
Identity = 242/267 (90.64%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           ME  +RFSFRLFPISLAERC KPS  APNFRKLI+R    S N PKFIPA KTYS SSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLAPNFRKLIHRTISSSPNIPKFIPAXKTYSSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVL MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLTMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVERYLDVE+ G DR+G+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEIAGFDRNGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR AENLTLPLAEGCPKLG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPKLGVR 267

[Close]

BLAST of Cla97C07G139560 vs. ExPASy TrEMBL
Match: A0A0A0KWR7 (Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_4G004880 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.0e-133
Identity = 240/267 (89.89%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           ME  +RFSFRLFPISLAERC KPS   PNFRKLI+R    S N PKFIP PKTYS SSTS
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISSSPNIPKFIPVPKTYSSSSTS 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKEIGSEK+QKIIDDM+L MRKA
Sbjct: 61  IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVERYLDVEV G DRDG+PIKVDASGWQARILQHECDHLDGTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR  ENLTLPLAEGCPKLGAR
Sbjct: 241 KMVPRTFRTTENLTLPLAEGCPKLGAR 267

[Close]

BLAST of Cla97C07G139560 vs. ExPASy TrEMBL
Match: A0A6J1DL13 (Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111021042 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 2.0e-129
Identity = 236/270 (87.41%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNF---PKFIPAPKTYSFS 90
           M+T +RFSFRLFPISLA  CL PSS  P F KL +R T  S++F   PKF+P  +TYS S
Sbjct: 1   MDTIHRFSFRLFPISLAHCCLNPSSATPKFPKLFHRPTS-SFDFDCIPKFVPPRQTYSSS 60

Query: 91  STSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM 150
           STSIAKAGWFLGLGEQKK+SLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM
Sbjct: 61  STSIAKAGWFLGLGEQKKMSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAM 120

Query: 151 RKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSN 210
           RKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NPKLK KSN
Sbjct: 121 RKAPGVGLAAPQIGIPLRIIVLEDTQEYISYAPKEEIKAQDRRPFDLLVIVNPKLKCKSN 180

Query: 211 KTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTL 270
           KTALFFEGCLSVDGFRAVVER+LDVEV GLDRDG+PIKVDASGWQARILQHECDHLDGTL
Sbjct: 181 KTALFFEGCLSVDGFRAVVERHLDVEVVGLDRDGNPIKVDASGWQARILQHECDHLDGTL 240

Query: 271 YVDKMVPRTFRAAENLTLPLAEGCPKLGAR 298
           YVDKM+PRTFR AENLTLPLAEGCPKLGAR
Sbjct: 241 YVDKMLPRTFRMAENLTLPLAEGCPKLGAR 269

[Close]

BLAST of Cla97C07G139560 vs. ExPASy TrEMBL
Match: A0A6J1G8Z1 (Peptide deformylase OS=Cucurbita moschata OX=3662 GN=LOC111452048 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.7e-124
Identity = 227/267 (85.02%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 31  METSYRFSFRLFPISLAERCLKPSSPAPNFRKLIYRATCLSYNFPKFIPAPKTYSFSSTS 90
           MET +RFSFRL P SLAERCLKPSS  P FR LI   T  S + PKFIPA K+YS S + 
Sbjct: 1   METVHRFSFRLLPFSLAERCLKPSSATPRFRNLICGPTSSSNHIPKFIPARKSYSSSFSP 60

Query: 91  IAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKA 150
           IAKAGWFLGLG++ K SLP IV AGDPVLHEPAREVDPKEIGS+KIQKIIDDMV+AMR A
Sbjct: 61  IAKAGWFLGLGDKNKTSLPKIVNAGDPVLHEPAREVDPKEIGSDKIQKIIDDMVVAMRNA 120

Query: 151 PGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 210
           PGVGLAA QIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA
Sbjct: 121 PGVGLAATQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTA 180

Query: 211 LFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVD 270
           LFFEGCLSVDGFRAVVER+LDVEV GLDR GS IKVDASGWQARILQHECDHL+GTLYVD
Sbjct: 181 LFFEGCLSVDGFRAVVERHLDVEVVGLDRYGSRIKVDASGWQARILQHECDHLEGTLYVD 240

Query: 271 KMVPRTFRAAENLTLPLAEGCPKLGAR 298
           KMVPRTFR AENLTLPLAEGCP+LG R
Sbjct: 241 KMVPRTFRTAENLTLPLAEGCPRLGVR 267

[Close]

BLAST of Cla97C07G139560 vs. TAIR 10
Match: AT1G15390.1 (peptide deformylase 1A )

HSP 1 Score: 355.5 bits (911), Expect = 4.1e-98
Identity = 186/270 (68.89%), Postives = 205/270 (75.93%), Query Frame = 0


Query: 29  TEMETSYRFSFRLFPISLAERCLKPSSPA--PNFRKLIYRATCLSYNFPKFIPAPKTYSF 88
           T MET +R S RL P+S A  C     P   P    L+ R     YN P         S 
Sbjct: 9   TAMETLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKL---YNLPT--------SS 68

Query: 89  SSTSIAKAGWFLGLGE-QKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVL 148
           SS+   KAGW LGLGE +KK+ LP IV +GDPVLHE AREVDP EIGSE+IQKIIDDM+ 
Sbjct: 69  SSSLSTKAGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIK 128

Query: 149 AMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSK 208
            MR APGVGLAAPQIG+PLRIIVLEDTKEYISYAPKEEI AQ+RR FDL+V++NP LK +
Sbjct: 129 VMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKER 188

Query: 209 SNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDRDGSPIKVDASGWQARILQHECDHLDG 268
           SNK ALFFEGCLSVDGFRA VERYL+V VTG DR G  I+V+ASGWQARILQHECDHLDG
Sbjct: 189 SNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDG 248

Query: 269 TLYVDKMVPRTFRAAENLTLPLAEGCPKLG 296
            LYVDKMVPRTFR  +NL LPLAEGCPKLG
Sbjct: 249 NLYVDKMVPRTFRTVDNLDLPLAEGCPKLG 267

[Close]

BLAST of Cla97C07G139560 vs. TAIR 10
Match: AT5G14660.1 (peptide deformylase 1B )

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 111 IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLE 170
           IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V  
Sbjct: 83  IVEYPDPILRAKNKRID---IFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 142

Query: 171 DTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 230
              E     P E  +         +V++NPK+K  S+K   F EGCLS  G  A V R  
Sbjct: 143 PAGE-----PGEGKE---------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 202

Query: 231 DVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVDKM 273
            V++   D  G    +  S   ARI QHE DHL+G L+ D+M
Sbjct: 203 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRM 227

[Close]

BLAST of Cla97C07G139560 vs. TAIR 10
Match: AT5G14660.2 (peptide deformylase 1B )

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 111 IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLE 170
           IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V  
Sbjct: 83  IVEYPDPILRAKNKRID---IFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 142

Query: 171 DTKEYISYAPKEEIKAQDRRPFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYL 230
              E     P E  +         +V++NPK+K  S+K   F EGCLS  G  A V R  
Sbjct: 143 PAGE-----PGEGKE---------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 202

Query: 231 DVEVTGLDRDGSPIKVDASGWQARILQHECDHLDGTLYVDKM 273
            V++   D  G    +  S   ARI QHE DHL+G L+ D+M
Sbjct: 203 SVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRM 227

The following BLAST results are available for this feature:

BLAST of Cla97C07G139560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878019.1	3.5e-136	91.01	peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida]	[more]
KAA0044431.1	5.1e-135	91.01	peptide deformylase 1A [Cucumis melo var. makuwa] >TYK29558.1 peptide deformylas...	[more]
XP_008454248.1	4.3e-134	90.64	PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondr...	[more]
XP_004152208.2	2.1e-133	89.89	peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus] >KGN52877....	[more]
XP_022153571.1	4.2e-129	87.41	peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia]	[more]

BLAST of Cla97C07G139560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FV53	5.7e-97	68.89	Peptide deformylase 1A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
Q9FUZ0	3.1e-95	80.77	Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1A P...	[more]
B6RGY0	3.2e-87	62.26	Peptide deformylase 1A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q7NJV3	6.4e-40	47.67	Peptide deformylase 1 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX...	[more]
Q825U9	7.6e-33	41.40	Peptide deformylase 3 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492...	[more]

BLAST of Cla97C07G139560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1C7	2.5e-135	91.01	Peptide deformylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G...	[more]
A0A1S3BY63	2.1e-134	90.64	Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103494711 PE=3 SV=1	[more]
A0A0A0KWR7	1.0e-133	89.89	Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_4G004880 PE=3 SV=1	[more]
A0A6J1DL13	2.0e-129	87.41	Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111021042 PE=3 SV=1	[more]
A0A6J1G8Z1	5.7e-124	85.02	Peptide deformylase OS=Cucurbita moschata OX=3662 GN=LOC111452048 PE=3 SV=1	[more]

BLAST of Cla97C07G139560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15390.1	4.1e-98	68.89	peptide deformylase 1A	[more]
AT5G14660.1	2.0e-20	35.19	peptide deformylase 1B	[more]
AT5G14660.2	2.0e-20	35.19	peptide deformylase 1B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023635	Peptide deformylase	PRINTS	PR01576	PDEFORMYLASE	coord: 214..225 score: 58.95 coord: 245..274 score: 45.74 coord: 141..170 score: 47.41 coord: 226..244 score: 36.45
IPR023635	Peptide deformylase	TIGRFAM	TIGR00079	TIGR00079	coord: 111..275 e-value: 3.0E-36 score: 122.4
IPR023635	Peptide deformylase	PFAM	PF01327	Pep_deformylase	coord: 110..275 e-value: 5.5E-50 score: 169.1
IPR023635	Peptide deformylase	PANTHER	PTHR10458	PEPTIDE DEFORMYLASE	coord: 31..296
IPR023635	Peptide deformylase	HAMAP	MF_00163	Pep_deformylase	coord: 107..283 score: 27.266579
IPR023635	Peptide deformylase	CDD	cd00487	Pep_deformylase	coord: 111..268 e-value: 2.29504E-68 score: 207.339
IPR036821	Peptide deformylase superfamily	GENE3D	3.90.45.10	Peptide deformylase	coord: 107..297 e-value: 4.8E-69 score: 233.3
IPR036821	Peptide deformylase superfamily	SUPERFAMILY	56420	Peptide deformylase	coord: 106..279
None	No IPR available	PANTHER	PTHR10458:SF18	PEPTIDE DEFORMYLASE	coord: 31..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G139560.2	Cla97C07G139560.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043686	co-translational protein modification
biological_process	GO:0031365	N-terminal protein amino acid modification
biological_process	GO:0018206	peptidyl-methionine modification
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0042586	peptide deformylase activity