Cla97C07G133600 (gene) Watermelon (97103) v2.5

Overview
NameCla97C07G133600
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionPhosphatidate phosphatase
LocationCla97Chr07: 6650754 .. 6653726 (-)
RNA-Seq ExpressionCla97C07G133600
SyntenyCla97C07G133600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTCGACGTGCTTCCATCTTCTATCAATATGAAACTAACTCCAGAGCCGCTTGTCCAAATTCACGACGAGACCTCTACTTCTGAGGTCATGGCCCAGGGCCCCACGTGGCCCCCACCGAGCTTGTCATTGACACTGCCAATGGCACTAATGCTCGTCTTCTTGCTTGTTGTTCAGCTTGACATGCTTGCCCACTTATCTTGGTGTGTTGGATGATGCACCATTCTTCTTAGTTGCATCATGACACTTCACTTGGCCCTCTGTCATTGGCAGATGTGTCGACACTCTTGTATCTCCACCACACTGTCTACACAAGTGGGGTCACAATCTACTATCTCAAAGTTAGATTGTGACACACGTGATGCATTTTAACCTACCCAATTTGCGTTGGATAAGTAATGTTCAACTAAAGTTTTATTTGAATTATATGCATATGTATTTTGGTAATTCAATGGCTAAAAGAGTTTTAGCCGGCCATGTAACTACGTTAGTTATGATATTTTAGTGTAGGTGCCACAAACAATTTTTAAATTGGTGGCTAGGTGCCACAAACAATTTTTAAATTGGTGGCGCTTTTTCAAGATAACAATATAAATTGAGGCAACATGAAAAATCTAGGATTTTTTAAATCTATATTTTTTGAACGTCTAAAAGGAAATAATTTTGAAGATATAATATCTTGATCATTGTAAATTAAATTATCTTCAATTTTCTTAGCACTATCACATATGTAGATCAATTTTACTTTTGAATTTTAATTATGTATGTGATTATGTTTTAAATGGGTTTATATACAATTGTTAAATCCTCCATTATTAAACATGATGATCACAATTATTTCAATTGTTAATTGTTATATTAGAATAATATATATTTTATATGTTAAGATTAGAGAACTTCTTATAAATAGAAAAAATATGAAATTATTTACACATATAGCAAAAAAACTACCATGTGATTTTTAAAATTAGGACCTCCATTGTATTCTTTCATAATACCCAAACTACCCTTTTTTATTTCAAGTTAGCATGCTTTTCATGTTTCTTCTTCGCTGATATTTTCTGGATTATCAATGATACTGATCTCCTTCTTCTTCTTTGAGGTCGTGCAATTTCTAAGTATCGATCTTCTTCTTCTTCTTCAATTGGAATTCATCTCAGAAGTTGTGCACTTGACTGATATGCAGACGATCTTCTCAGGTACCATGTTCTTCTTCTTTTTAGGGCTTGAGTCTACTCTATCTATGTTGCCTCTAGAATTGTTATTTTTCTCTCATTGTTCTTGAATTTTAATGTAGTAAATTTTCTTAGTAGATGTAGTAGATTGGTGATTATAACAAAAGATTGAAAAGTATTCAAGTTGTGAAATTCATTTCACAAGTATTGGAGGATATAAATTATGTTAGGTATGATTAAAAGGAAACAAACAAAGGAAAGTTAATTTCTAATTGGGTATTTCTCACAAATTGGAGGGGGTATTAATCGAGCGTCCAAATGAACGTTGATGGCAAAGTTGGGAATCTCATCTCTCAAGGAGTTTATTCAGTTGCTACGCCATTTCATCCCTTCGATGGTGCAGTCGATACAATCATTGTTCAGCAGCAAGATGGGACTTTCTGCAACACACAATTGGTATGTTCGGTTTTGTAAATTTAAGGGCATTTTAAAGGGTACTAAGAAGATCGTCCACATATCTGTCAATGTCTAATAGACTTCTATCATGGTTTATCAGAGATAAACACTAATAGATACAGATAGACAACTATCATGGTCTAACAGTGATAGATTCTATCAGTATCTATCTTTGATAGACACTCATTTTTCTTATACACTTGTTGATACTTATTGCATTTCTCATTTTTATCTATTAGGTTAATCCCATTAACAACATTGAATACAAAGTAATGGATGGAGATAAACAATTCATATTGAACTTGTAACGCCCCACGCTAAAATAAGACTAGAATGGTGTGAACCGGGCCAACACACGTTCTTTTTTTTGGTTAAATAATTATTGTAGCTCCTCATTGTAATCATCGTGAATTATTTCTACCAATAAATCTGTTCGGGCTGGTATTTATTTAGTTCGATTCATTTTATTTTTAATAATAATAATAATGACAATATTAATAATAAAGGGAAATTTATATCATATTAATTAGGGAAATTAATATAATGATAATATTAATAAGAGAATTAAATTACTTTCCTTTTTAAAAGATTTTTTTTTTGTTTTTTTAAAAAAGAAGAGTTTAAGAAAATTAAAAAAAAAAAAACATTTCTTTCTCCCTTCCCCCTGTTCCATCTTCCTCTCCCTCTATCCCTCTCACTGATCTCTCCCGCTGTCCTCTCTCTCCATCACCGATCTCTCTCTTCCGCCGCACTTTCTCCCCCTCTCCCGATCTCCCTCTCTCGCCATCTCCCCTCTCTCACCGCTCTCCCTCTCCTCTTCCGACCCATGCCAACCCCCATCGTGTTTCCCCTGCGCGTGGTGTCCAGCCGAAGAAAACCCAAGCGACGGCACGCGATCTGGCAGGCGACAGCTCAAGGACCATTCGACCGTTCGTCTACTCGACTGCTCGGCGTGCACGGTGGTAGCTTAGTGGTTCCACGCAATTTAGGCAGTTTTCAACAACACGTCTTTAGGACAATAAGTTTCGACAATTGTTTATCCTATTTTCGCATCAGATCTGTGCCACCCACTATGTACTAACCTTAGATCTACAGGACTCAAGGCATTCGGACACTAATCGACAAGGGTTAGAGACGTTTGGTTGAGTTTTAGTGGGTAAGGATGCTCGGAATCCCTTTTCGAACTAGATTTAAGCTATTTCTCTAATGCTGGAAAATATCCACTTGTGGACTTGACAGCATTCAGGAGTCGTTCGAACACGTTGCAGCAAAGGAGTCGGTCTATTTCGGCTCGCGGATCGGGGATTTAAGTCGCCTTGAGTACATGCGTATCCACTAG

mRNA sequence

ATGGAATTCGACGTGCTTCCATCTTCTATCAATATGAAACTAACTCCAGAGCCGCTTGTCCAAATTCACGACGAGACCTCTACTTCTGAGGTCATGGCCCAGGGCCCCACGTGGCCCCCACCGAGCTTGTCATTGACACTGCCAATGGCACTAATGCTCGTCTTCTTGCTTGTTGTTCAGCTTGACATGCTTGCCCACTTATCTTGCGTCCAAATGAACGTTGATGGCAAAGTTGGGAATCTCATCTCTCAAGGAGTTTATTCAGTTGCTACGCCATTTCATCCCTTCGATGGTGCAGTCGATACAATCATTGTTCAGCAGCAAGATGGGACTTTCTGCAACACACAATTGCCGAAGAAAACCCAAGCGACGGCACGCGATCTGGCAGGCGACAGCTCAAGGACCATTCGACCGTTCGTCTACTCGACTGCTCGGCGTGCACGGTGCATTCAGGAGTCGTTCGAACACGTTGCAGCAAAGGAGTCGGTCTATTTCGGCTCGCGGATCGGGGATTTAAGTCGCCTTGAGTACATGCGTATCCACTAG

Coding sequence (CDS)

ATGGAATTCGACGTGCTTCCATCTTCTATCAATATGAAACTAACTCCAGAGCCGCTTGTCCAAATTCACGACGAGACCTCTACTTCTGAGGTCATGGCCCAGGGCCCCACGTGGCCCCCACCGAGCTTGTCATTGACACTGCCAATGGCACTAATGCTCGTCTTCTTGCTTGTTGTTCAGCTTGACATGCTTGCCCACTTATCTTGCGTCCAAATGAACGTTGATGGCAAAGTTGGGAATCTCATCTCTCAAGGAGTTTATTCAGTTGCTACGCCATTTCATCCCTTCGATGGTGCAGTCGATACAATCATTGTTCAGCAGCAAGATGGGACTTTCTGCAACACACAATTGCCGAAGAAAACCCAAGCGACGGCACGCGATCTGGCAGGCGACAGCTCAAGGACCATTCGACCGTTCGTCTACTCGACTGCTCGGCGTGCACGGTGCATTCAGGAGTCGTTCGAACACGTTGCAGCAAAGGAGTCGGTCTATTTCGGCTCGCGGATCGGGGATTTAAGTCGCCTTGAGTACATGCGTATCCACTAG

Protein sequence

MEFDVLPSSINMKLTPEPLVQIHDETSTSEVMAQGPTWPPPSLSLTLPMALMLVFLLVVQLDMLAHLSCVQMNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNTQLPKKTQATARDLAGDSSRTIRPFVYSTARRARCIQESFEHVAAKESVYFGSRIGDLSRLEYMRIH
Homology
BLAST of Cla97C07G133600 vs. NCBI nr
Match: KAB5553021.1 (hypothetical protein DKX38_010332 [Salix brachista])

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 71  QMNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           QMNV GKVG+LISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 46  QMNVVGKVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 90

BLAST of Cla97C07G133600 vs. NCBI nr
Match: KAF9680891.1 (hypothetical protein SADUNF_Sadunf06G0168900 [Salix dunnii])

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 71  QMNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           QMNV GKVG+LISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 22  QMNVVGKVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 66

BLAST of Cla97C07G133600 vs. NCBI nr
Match: XP_024923765.1 (phosphatidate phosphatase PAH1 isoform X4 [Ziziphus jujuba])

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. NCBI nr
Match: XP_024923763.1 (phosphatidate phosphatase PAH1 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. NCBI nr
Match: XP_024923764.1 (phosphatidate phosphatase PAH1 isoform X3 [Ziziphus jujuba])

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. ExPASy Swiss-Prot
Match: Q9SF47 (Phosphatidate phosphatase PAH1 OS=Arabidopsis thaliana OX=3702 GN=PAH1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.9e-12
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           M++ G+VG+LISQGVYSVATPFHPF GA+D I+VQQQDG+F +T
Sbjct: 1   MSLVGRVGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGSFRST 44

BLAST of Cla97C07G133600 vs. ExPASy Swiss-Prot
Match: Q9FMN2 (Phosphatidate phosphatase PAH2 OS=Arabidopsis thaliana OX=3702 GN=PAH2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTF 113
           MN  G++G+ I +GV +V+ PFHPF GA+D I+V+Q DGTF
Sbjct: 1   MNAVGRIGSYIYRGVGTVSGPFHPFGGAIDIIVVEQPDGTF 41

BLAST of Cla97C07G133600 vs. ExPASy TrEMBL
Match: A0A5N5MFN0 (Phosphatidate phosphatase OS=Salix brachista OX=2182728 GN=DKX38_010332 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.1e-12
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 71  QMNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           QMNV GKVG+LISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 46  QMNVVGKVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 90

BLAST of Cla97C07G133600 vs. ExPASy TrEMBL
Match: A0A6P4AUB3 (Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. ExPASy TrEMBL
Match: A0A6P6FQK3 (Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. ExPASy TrEMBL
Match: A0A6P6FNW6 (Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. ExPASy TrEMBL
Match: A0A6P6FPS9 (Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           MNV G+VGNLISQGVYSVATPFHPF GAVD I+VQQQDGTF +T
Sbjct: 1   MNVVGRVGNLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRST 44

BLAST of Cla97C07G133600 vs. TAIR 10
Match: AT3G09560.2 (Lipin family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           M++ G+VG+LISQGVYSVATPFHPF GA+D I+VQQQDG+F +T
Sbjct: 1   MSLVGRVGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGSFRST 44

BLAST of Cla97C07G133600 vs. TAIR 10
Match: AT3G09560.1 (Lipin family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           M++ G+VG+LISQGVYSVATPFHPF GA+D I+VQQQDG+F +T
Sbjct: 1   MSLVGRVGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGSFRST 44

BLAST of Cla97C07G133600 vs. TAIR 10
Match: AT3G09560.3 (Lipin family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTFCNT 116
           M++ G+VG+LISQGVYSVATPFHPF GA+D I+VQQQDG+F +T
Sbjct: 1   MSLVGRVGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGSFRST 44

BLAST of Cla97C07G133600 vs. TAIR 10
Match: AT5G42870.1 (phosphatidic acid phosphohydrolase 2 )

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-08
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTF 113
           MN  G++G+ I +GV +V+ PFHPF GA+D I+V+Q DGTF
Sbjct: 1   MNAVGRIGSYIYRGVGTVSGPFHPFGGAIDIIVVEQPDGTF 41

BLAST of Cla97C07G133600 vs. TAIR 10
Match: AT5G42870.2 (phosphatidic acid phosphohydrolase 2 )

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-08
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 72  MNVDGKVGNLISQGVYSVATPFHPFDGAVDTIIVQQQDGTF 113
           MN  G++G+ I +GV +V+ PFHPF GA+D I+V+Q DGTF
Sbjct: 1   MNAVGRIGSYIYRGVGTVSGPFHPFGGAIDIIVVEQPDGTF 41

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAB5553021.11.3e-1184.44hypothetical protein DKX38_010332 [Salix brachista][more]
KAF9680891.11.3e-1184.44hypothetical protein SADUNF_Sadunf06G0168900 [Salix dunnii][more]
XP_024923765.13.7e-1184.09phosphatidate phosphatase PAH1 isoform X4 [Ziziphus jujuba][more]
XP_024923763.13.7e-1184.09phosphatidate phosphatase PAH1 isoform X2 [Ziziphus jujuba][more]
XP_024923764.13.7e-1184.09phosphatidate phosphatase PAH1 isoform X3 [Ziziphus jujuba][more]
Match NameE-valueIdentityDescription
Q9SF475.9e-1272.73Phosphatidate phosphatase PAH1 OS=Arabidopsis thaliana OX=3702 GN=PAH1 PE=1 SV=1[more]
Q9FMN25.7e-0756.10Phosphatidate phosphatase PAH2 OS=Arabidopsis thaliana OX=3702 GN=PAH2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5N5MFN06.1e-1284.44Phosphatidate phosphatase OS=Salix brachista OX=2182728 GN=DKX38_010332 PE=3 SV=... [more]
A0A6P4AUB31.8e-1184.09Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1[more]
A0A6P6FQK31.8e-1184.09Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1[more]
A0A6P6FNW61.8e-1184.09Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1[more]
A0A6P6FPS91.8e-1184.09Phosphatidate phosphatase OS=Ziziphus jujuba OX=326968 GN=LOC107435607 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G09560.24.2e-1372.73Lipin family protein [more]
AT3G09560.14.2e-1372.73Lipin family protein [more]
AT3G09560.34.2e-1372.73Lipin family protein [more]
AT5G42870.14.1e-0856.10phosphatidic acid phosphohydrolase 2 [more]
AT5G42870.24.1e-0856.10phosphatidic acid phosphohydrolase 2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026058LIPIN familyPANTHERPTHR12181LIPINcoord: 72..115
NoneNo IPR availablePANTHERPTHR12181:SF56PHOSPHATIDIC ACID PHOSPHOHYDROLASEcoord: 72..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G133600.1Cla97C07G133600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044255 cellular lipid metabolic process
biological_process GO:0016311 dephosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008195 phosphatidate phosphatase activity