Cla97C07G133400 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G133400
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	40S ribosomal protein S26
Location	Cla97Chr07: 6323164 .. 6326472 (-)
RNA-Seq Expression	Cla97C07G133400
Synteny	Cla97C07G133400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTACCGGTGCGGATCTTCTCTCTCACACTCGGCATTTCCCACAAAAACCCTAATCGGCTGCGTCTCTCTCTCTCTGCTTCATTTGAAGATCTCCAACTTTGGAACAATGGTAATGTCATCATACCGTTACCTTTTCCTCTGAATCTTCTTCTTGTAAATCGTTCTTCCTTCATCTTTTTTCCTCTTGGTTCTGCCAGACTTTCAAGCGCAGGAATGGCGGACGTAACAAGCATGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGAAAATGCTGCCCTAAGGTTATTGTTTTACTCATCTTTCTGCGCAGTTCTTGCGTGCATATCTTGATTGTTCAATGGCAGCGGTCAAATCTATATGCCTTGCAAATGTTTCATCTGCGAAATTGGGTCATTTTTTGTTTAATTAGGTTTTTTAATTTCTTGATTGCAAGTGTTACTAGTGTGTTTATGATTGATTTATCTAGAAATTGCGAGGGATAAGTGTTTACCAAGTTCTGGGGATATGATTTTTGTATGTATAATGTTAGTATCTATATGATATCCTATTTATAATGTTGTTTATATAGTTGTTAAGAAATTGTTTGGGTGGTTTTTGTGTTAAGTTAAAGAGATAGACTTGATGTTTTGCTGAATTTTAAATTGCTTTTTGGTGAAACACTTTAATAGCATTTTTACCAGAACGTTCGACAGGAGTGTTCTGTTAAAAAAATGGTATTCCCGCAAGCTTTCCAAACTCTAGGCTTAGACTTGCCGGAAAGCAAGATTCTAACTTTTAGCTTGAGACTTATGCCTTCTTTCGCCCATAAGAGGTTTATTCTCTCATAGAGGAAGTTTTTGCTTCCCTGAAAATGCACCAAGGCTTAAAATTCTTTACACCTCTTGAAAAGATTAGAAGAATAACGTAGAGTTACACAATTTCTAAAAGTATAAAGCGTTCATTGTTTTTTTTGTAATGGTAATAAATGACTTATGGCTATTCAACCACTTACTACTTTGACTATCTAAGCTTCAAAGTCATTGAAGACAAAATTTTTTAAATAGTCAATACTCATAGTGGTGATGTTAAGAATTAGTTATTTGAAATTTGGCTACATCATAAAACAATATCCATGTACTTTTCCTTTTGTTTAAAAAATACCCCTATTCTTTCAAAAGTTGCAATATTATTATCCTTGAATTTTTACTAAAATTTTCAAACTACACTTGATGTAGAAATCCATTAGATTTTGGATGGAATTTGGGATCTGGAACAGATATGAAAATTACCTAGAACATTGTTGTAGCATTTGGGTTTTAATTTTCTTTCCAAGTCTCTGCCATATCATTTTAAGTCTCGCATATCATTTTAAGTCTCAATTTTCGTCCAATATTGGAATGGATTTCTACTCTAAGGGTAGTTTTGAAACATCAATGAAATTTTAAGGATAATATCGCAACTTTTGAAAAAATACTGAGTAATTTGAAATAATGGGCAATGTTCAGTAGCTTAGAAATTTTATTTAGTTGGCAATTGATGGGTAATTTTTTTAATACTTGAAGAAAAGTCTTGAGATCACCTTTTGTCTTTTTAAACATTGCCTAAACACGCTAGTTTTGGAAGGAGTGAATTTGAGTGAGTGTCCATGGCCTATTGGGAAAGAGCAATTTAAATCTAACTTCATTGGTTTTGATTGATGAGAATAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGATCGTAAGTTTTTCTGTTCACTCCTGATATATTTTGGTTGCTGTATTTCATATAACATCAGTATTTTTGTTCAGTGTCTGATGTAGATCTTTGTTTATGTTTTCTGAGCAGAATATACTCTTCCTAAGCTTTATGCGAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAACGTTTCATCAGACGCAGGGTTAGTCTTTGCTTAAATTATTTATAACTTTGATTCATAACGAAGTAACCATATTAACAGTGAATTTGATGAAGCATGCCTATTTTTATGTACTGTTATTACTCATACACGGGTGATGGTATTTGCATAAAATATATATAGCGTTGATTCATCATGAAGTAACGATGTTCACAGTGCATTTGATAAAGTCTTTTTTTTATCTGTACTCTTAGTATTTGGTGAGCTCAAATTTTTATGATGGGCAGTAGAAAGAGTATTTGCATCATAACTTAACTCTAATGCTTCTTTGTAATCATTGATGAATGTGAGGAACTCCTCGAAGGTTCCAGCTACACTTTTTAAAGATTAATTATTACGGAAACTTGAGACTTTTTGATTAGGTACTTTGTTCGGTATGTATTAATAAAATAATCCATCAGACACCATATTTTAAAAGCTTGATTCAAATGGTATTAATAAAATAATCCATCAGACATCATATTTTAAAAACTTGATTCAAATGGTGTCCCTACAATTACCTGCAGTTTGACATGTTAAATTCCTACTGGTTTTGATTATGTATATATTTGATTTTAATGATGATACCAACTATTTGATATGACTATTGACTCATCGTATACTTGTTAGTACATGCAACTCATTATTGTTCGTTGGTCTGTCTAGTAGTGATATCTGGAGTGGCCTCCGGTTGTTTGTTACCTAATCCCATTTCTGTGTTTATTTCAGGAGGATCAGGCAAAACCTGGTCAGCCAGGGCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTGCCCGTGTATAAAAGAAACCTTTCCATGGCTTCTACGAGTAAGTCGTAGGGATCTTTTACAAGTCGCTCTATTATAGTTTGGTTGTTTCTTTTGTGGATGAAAGTGAAATTTAGAAACAAACTTAGCTGACAATTTTGCAACTTGGAAGGAACTAAAGACCGTTTATGGAGTTGTTTATTTAATGGTTTTTCTTCAGTTTCTTGTTTCGCTGTTCCGGGAGTTCCGATTTTATTGTCTGTTGAGCTTAATGCTCATATTGACCTCAATTTGTTTCTTCAATCGTCATTTTACTGTGCTGCCTTCCTTGCTTTTTAATCATGTCTCAGGGGCAACGGGAAAGGACGAACTAAAAATTTGAAAATTTGAAAGGAAAAGAAAAAGGACGAACGAAAACTTTCATCCGAACAGTATGATGCTATTCTTAAATGTCAATGTCTATTGATATTTATGGAAAAAATAACAGTAATATTTTATAAAAAAAGATATTTACAC

mRNA sequence

ATGCGTTTACCGACTTTCAAGCGCAGGAATGGCGGACGTAACAAGCATGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGAAAATGCTGCCCTAAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGATCAATATACTCTTCCTAAGCTTTATGCGAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAACGTTTCATCAGACGCAGGGAGGATCAGGCAAAACCTGGTCAGCCAGGGCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTGCCCGTGGGCAACGGGAAAGGACGAACTAAAAATTTGAAAATTTGAAAGGAAAAGAAAAAGGACGAACGAAAACTTTCATCCGAACAGTATGATGCTATTCTTAAATGTCAATGTCTATTGATATTTATGGAAAAAATAACAGTAATATTTTATAAAAAAAGATATTTACAC

Coding sequence (CDS)

ATGCGTTTACCGACTTTCAAGCGCAGGAATGGCGGACGTAACAAGCATGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGAAAATGCTGCCCTAAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGATCAATATACTCTTCCTAAGCTTTATGCGAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATCGGCAACCACCACAACGTTTCATCAGACGCAGGGAGGATCAGGCAAAACCTGGTCAGCCAGGGCAAGCACCTCGTCCTGTTGGAGCTGGAAATCCTGCCCGTGGGCAACGGGAAAGGACGAACTAA

Protein sequence

MRLPTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPVGAGNPARGQRERTN

Homology

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BLAST of Cla97C07G133400 vs. NCBI nr
Match: XP_004146441.1 (40S ribosomal protein S26-1 [Cucumis sativus] >XP_008456941.1 PREDICTED: 40S ribosomal protein S26-1 [Cucumis melo] >XP_038891817.1 40S ribosomal protein S26-1-like [Benincasa hispida] >KAA0067538.1 hypothetical protein E6C27_scaffold50G00610 [Cucumis melo var. makuwa] >KGN50730.1 hypothetical protein Csa_005888 [Cucumis sativus] >TYK22411.1 hypothetical protein E5676_scaffold530G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 8.9e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 121

Query: 125 GAGNPAR 132
           GAGNPAR
Sbjct: 122 GAGNPAR 128

[Close]

BLAST of Cla97C07G133400 vs. NCBI nr
Match: XP_022943123.1 (40S ribosomal protein S26-1-like [Cucurbita moschata] >XP_022987349.1 40S ribosomal protein S26-1-like [Cucurbita maxima] >KAG6600881.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031515.1 40S ribosomal protein S26-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.3 bits (643), Expect = 2.4e-63
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQ KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPA 121

Query: 125 GAGNPAR 132
           GAG PAR
Sbjct: 122 GAGIPAR 128

[Close]

BLAST of Cla97C07G133400 vs. NCBI nr
Match: XP_023529394.1 (40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.3 bits (643), Expect = 2.4e-63
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQ KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPA 121

Query: 125 GAGNPAR 132
           GAG PAR
Sbjct: 122 GAGVPAR 128

[Close]

BLAST of Cla97C07G133400 vs. NCBI nr
Match: XP_022941874.1 (40S ribosomal protein S26-3-like [Cucurbita moschata] >XP_023532350.1 40S ribosomal protein S26-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 5.4e-63
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAK---PGQPGQAP 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF+RRR+DQ K   PGQPGQAP
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQPGQAP 121

Query: 125 RPVGAGNPAR 132
           RPVGAGNPAR
Sbjct: 122 RPVGAGNPAR 131

[Close]

BLAST of Cla97C07G133400 vs. NCBI nr
Match: KAG6599946.1 (40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030627.1 40S ribosomal protein S26-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 124/133 (93.23%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAK------PGQPG 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF+RRR+DQ K      PGQPG
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQPGQPG 121

Query: 125 QAPRPVGAGNPAR 132
           QAPRPVGAGNPAR
Sbjct: 122 QAPRPVGAGNPAR 134

[Close]

BLAST of Cla97C07G133400 vs. ExPASy Swiss-Prot
Match: P49206 (40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 4.8e-54
Identity = 105/126 (83.33%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ 
Sbjct: 2   TFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED  KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPGQPGQAPRPA 121

Query: 125 GAGNPA 131
           G G  A
Sbjct: 122 GPGAAA 127

[Close]

BLAST of Cla97C07G133400 vs. ExPASy Swiss-Prot
Match: Q8LPJ7 (40S ribosomal protein S26-2 OS=Arabidopsis thaliana OX=3702 GN=RPS26B PE=2 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 4.8e-54
Identity = 105/126 (83.33%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ 
Sbjct: 2   TFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED  KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQPGQAPRPA 121

Query: 125 GAGNPA 131
           G G  A
Sbjct: 122 GPGAAA 127

[Close]

BLAST of Cla97C07G133400 vs. ExPASy Swiss-Prot
Match: Q9LYK9 (40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-53
Identity = 106/126 (84.13%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ 
Sbjct: 2   TFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED  KP QPGQAPRP 
Sbjct: 62  YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPAQPGQAPRPA 121

Query: 125 GAGNPA 131
           G G PA
Sbjct: 122 G-GAPA 126

[Close]

BLAST of Cla97C07G133400 vs. ExPASy Swiss-Prot
Match: P49216 (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS26 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 3.0e-48
Identity = 97/127 (76.38%), Postives = 111/127 (87.40%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D 
Sbjct: 2   TFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQP-GQAPRP 124
           Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+RF RRRED+ +  +P G AP P
Sbjct: 62  YVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERF-RRREDRPQGPRPGGGAPAP 121

Query: 125 VGAGNPA 131
            GA  PA
Sbjct: 122 GGAAAPA 127

[Close]

BLAST of Cla97C07G133400 vs. ExPASy Swiss-Prot
Match: O45499 (40S ribosomal protein S26 OS=Caenorhabditis elegans OX=6239 GN=rps-26 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.2e-38
Identity = 81/119 (68.07%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y Q
Sbjct: 2   TFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRP 124
           Y LPKLY K+ YC++CAIHS VVR RSR  RR+R PP RF  +R   A+PG PG  PRP
Sbjct: 62  YALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRF-GQRAAAARPGAPG--PRP 117

[Close]

BLAST of Cla97C07G133400 vs. ExPASy TrEMBL
Match: A0A5A7VIJ0 (40S ribosomal protein S26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00060 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.3e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 121

Query: 125 GAGNPAR 132
           GAGNPAR
Sbjct: 122 GAGNPAR 128

[Close]

BLAST of Cla97C07G133400 vs. ExPASy TrEMBL
Match: A0A0A0KM45 (40S ribosomal protein S26 OS=Cucumis sativus OX=3659 GN=Csa_5G220930 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.3e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 121

Query: 125 GAGNPAR 132
           GAGNPAR
Sbjct: 122 GAGNPAR 128

[Close]

BLAST of Cla97C07G133400 vs. ExPASy TrEMBL
Match: A0A1S3C5M1 (40S ribosomal protein S26 OS=Cucumis melo OX=3656 GN=LOC103496738 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.3e-66
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 121

Query: 125 GAGNPAR 132
           GAGNPAR
Sbjct: 122 GAGNPAR 128

[Close]

BLAST of Cla97C07G133400 vs. ExPASy TrEMBL
Match: A0A6J1JIN0 (40S ribosomal protein S26 OS=Cucurbita maxima OX=3661 GN=LOC111484926 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQ KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPA 121

Query: 125 GAGNPAR 132
           GAG PAR
Sbjct: 122 GAGIPAR 128

[Close]

BLAST of Cla97C07G133400 vs. ExPASy TrEMBL
Match: A0A6J1FWD9 (40S ribosomal protein S26 OS=Cucurbita moschata OX=3662 GN=LOC111447947 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ
Sbjct: 2   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRR+DQ KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRRDDQPKPGQPGQAPRPA 121

Query: 125 GAGNPAR 132
           GAG PAR
Sbjct: 122 GAGIPAR 128

[Close]

BLAST of Cla97C07G133400 vs. TAIR 10
Match: AT2G40510.1 (Ribosomal protein S26e family protein )

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-55
Identity = 105/126 (83.33%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ 
Sbjct: 2   TFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED  KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQPGQAPRPA 121

Query: 125 GAGNPA 131
           G G  A
Sbjct: 122 GPGAAA 127

[Close]

BLAST of Cla97C07G133400 vs. TAIR 10
Match: AT2G40590.1 (Ribosomal protein S26e family protein )

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-55
Identity = 105/126 (83.33%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ 
Sbjct: 2   TFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED  KPGQPGQAPRP 
Sbjct: 62  YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPGQPGQAPRPA 121

Query: 125 GAGNPA 131
           G G  A
Sbjct: 122 GPGAAA 127

[Close]

BLAST of Cla97C07G133400 vs. TAIR 10
Match: AT3G56340.1 (Ribosomal protein S26e family protein )

HSP 1 Score: 210.3 bits (534), Expect = 9.8e-55
Identity = 106/126 (84.13%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 5   TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQ 64
           TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ 
Sbjct: 2   TFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEG 61

Query: 65  YTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPV 124
           YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR+ED  KP QPGQAPRP 
Sbjct: 62  YTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPAQPGQAPRPA 121

Query: 125 GAGNPA 131
           G G PA
Sbjct: 122 G-GAPA 126

The following BLAST results are available for this feature:

BLAST of Cla97C07G133400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146441.1	8.9e-66	100.00	40S ribosomal protein S26-1 [Cucumis sativus] >XP_008456941.1 PREDICTED: 40S rib...	[more]
XP_022943123.1	2.4e-63	96.85	40S ribosomal protein S26-1-like [Cucurbita moschata] >XP_022987349.1 40S riboso...	[more]
XP_023529394.1	2.4e-63	96.85	40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941874.1	5.4e-63	95.38	40S ribosomal protein S26-3-like [Cucurbita moschata] >XP_023532350.1 40S riboso...	[more]
KAG6599946.1	1.2e-62	93.23	40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]

BLAST of Cla97C07G133400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49206	4.8e-54	83.33	40S ribosomal protein S26-1 OS=Arabidopsis thaliana OX=3702 GN=RPS26A PE=2 SV=2	[more]
Q8LPJ7	4.8e-54	83.33	40S ribosomal protein S26-2 OS=Arabidopsis thaliana OX=3702 GN=RPS26B PE=2 SV=2	[more]
Q9LYK9	1.4e-53	84.13	40S ribosomal protein S26-3 OS=Arabidopsis thaliana OX=3702 GN=RPS26C PE=2 SV=1	[more]
P49216	3.0e-48	76.38	40S ribosomal protein S26 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS26 PE=2...	[more]
O45499	8.2e-38	68.07	40S ribosomal protein S26 OS=Caenorhabditis elegans OX=6239 GN=rps-26 PE=3 SV=1	[more]

BLAST of Cla97C07G133400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIJ0	4.3e-66	100.00	40S ribosomal protein S26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KM45	4.3e-66	100.00	40S ribosomal protein S26 OS=Cucumis sativus OX=3659 GN=Csa_5G220930 PE=3 SV=1	[more]
A0A1S3C5M1	4.3e-66	100.00	40S ribosomal protein S26 OS=Cucumis melo OX=3656 GN=LOC103496738 PE=3 SV=1	[more]
A0A6J1JIN0	1.2e-63	96.85	40S ribosomal protein S26 OS=Cucurbita maxima OX=3661 GN=LOC111484926 PE=3 SV=1	[more]
A0A6J1FWD9	1.2e-63	96.85	40S ribosomal protein S26 OS=Cucurbita moschata OX=3662 GN=LOC111447947 PE=3 SV=...	[more]

BLAST of Cla97C07G133400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40510.1	3.4e-55	83.33	Ribosomal protein S26e family protein	[more]
AT2G40590.1	3.4e-55	83.33	Ribosomal protein S26e family protein	[more]
AT3G56340.1	9.8e-55	84.13	Ribosomal protein S26e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000892	Ribosomal protein S26e	PFAM	PF01283	Ribosomal_S26e	coord: 5..109 e-value: 6.5E-54 score: 180.9
IPR000892	Ribosomal protein S26e	PANTHER	PTHR12538	40S RIBOSOMAL PROTEIN S26	coord: 5..130
IPR000892	Ribosomal protein S26e	PROSITE	PS00733	RIBOSOMAL_S26E	coord: 76..83
IPR038551	Ribosomal protein S26e superfamily	GENE3D	3.30.1740.20	Ribosomal protein S26e	coord: 4..118 e-value: 1.3E-57 score: 195.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..138
None	No IPR available	PANTHER	PTHR12538:SF16	40S RIBOSOMAL PROTEIN S26	coord: 5..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G133400.2	Cla97C07G133400.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004784	superoxide dismutase activity