Cla97C07G132120 (gene) Watermelon (97103) v2.5

Overview
NameCla97C07G132120
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionL10-interacting MYB domain-containing protein-like
LocationCla97Chr07: 3860334 .. 3861376 (+)
RNA-Seq ExpressionCla97C07G132120
SyntenyCla97C07G132120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACGACGATTTTGAGTTTAGAAACAGATTTTGAGTTCAAGTCTTATGACGACGACGAGATGCTACTACCTTCAAATGATGAAAGAAATCATGAGGACACCAATGAAGAACATGGAGGTTTTGTTCATGAAATGGAGATGAATGAAGAACTGATCGAATTGCACAACTTTTCATATCTAGTTGATATTATATTGTCTAGGAACAATTATTATTATTTATGTTTTGTTGTTGGAGATCAATTATATTTTTTATGTTTATGTATTTACATTTCGATGATATTTGTAAATTTGAATTGTCCAAAAAAAATTTAATACAAAAAATAAATTTAATATTTAGTTTTAATTTCATAATTTATTTTCAAGATAACATGGAATTAATTTCAAAATATATTTATTTCTAAAAAAAATCAAAATACATGTGTTTCTTTCTGAAATTAGTTCATAGTGTTTAATAGTACTTTACGATAATTTAAGTTACATATAAACATTGTTGGTATAGGACAAACCAAACAAGGTTATATATATAAACACTTATAAAAATACCTAACCAAACATGTAAGTTGTGACATCTCATGTTTTAGGTAACTTTAAGCCATTTAACTTGAAGTGATTGGATTAATCATTAGATTAAAAGGTTTAATTGAATTAGGTGGGAAAATAATTCATCCAAAGTTAGCAAGACTGAGGTTTTTGGTTTTAATTCTTAATTGGGGGATTTAAATTGGAAAATTTGTGTGGGAAAAGGAAAATGAAAGTAATAAATGTTTATTTTTTTTATTTAAATTAGTTAAGGTTTGGTATTGGAGAAGGGAAGAGATTTAATTTTTTTTCTTTTTTCTTTTTCTTCCTCCTTCTGCCGGCAACGTCGCTCTCACCTCCCCGCCGCTCGCTTCCACCCGTGTCGTCCCGCCGGTTTCGCTCGCACCATCGCCGCGGGTTCCAGCACCGTCCAAACGCTATATCTACCACTGCTAGTCGGTTGCCGTGTGGCACCGCCTCCTGTTGGTTTGCCGGCAGCGTCGTCGGTCACCTTCCGGTAG

mRNA sequence

ATGACGACGACGATTTTGAGTTTAGAAACAGATTTTGAGTTCAAGTCTTATGACGACGACGAGATGCTACTACCTTCAAATGATGAAAGAAATCATGAGGACACCAATGAAGAACATGGAGGTTTGGTATTGGAGAAGGGAAGAGATTTAATTTTTTTTCTTTTTTCTTTTTCTTCCTCCTTCTGCCGGCAACGTCGCTCTCACCTCCCCGCCGCTCGCTTCCACCCGTGTCGTCCCGCCGGTTTCGCTCGCACCATCGCCGCGGGTTCCAGCACCGTCCAAACGCTATATCTACCACTGCTAGTCGGTTGCCGTGTGGCACCGCCTCCTGTTGGTTTGCCGGCAGCGTCGTCGGTCACCTTCCGGTAG

Coding sequence (CDS)

ATGACGACGACGATTTTGAGTTTAGAAACAGATTTTGAGTTCAAGTCTTATGACGACGACGAGATGCTACTACCTTCAAATGATGAAAGAAATCATGAGGACACCAATGAAGAACATGGAGGTTTGGTATTGGAGAAGGGAAGAGATTTAATTTTTTTTCTTTTTTCTTTTTCTTCCTCCTTCTGCCGGCAACGTCGCTCTCACCTCCCCGCCGCTCGCTTCCACCCGTGTCGTCCCGCCGGTTTCGCTCGCACCATCGCCGCGGGTTCCAGCACCGTCCAAACGCTATATCTACCACTGCTAGTCGGTTGCCGTGTGGCACCGCCTCCTGTTGGTTTGCCGGCAGCGTCGTCGGTCACCTTCCGGTAG

Protein sequence

MTTTILSLETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGLVLEKGRDLIFFLFSFSSSFCRQRRSHLPAARFHPCRPAGFARTIAAGSSTVQTLYLPLLVGCRVAPPPVGLPAASSVTFR
Homology
[Close]
BLAST of Cla97C07G132120 vs. NCBI nr
Match: KAA0048571.1 (uncharacterized protein E6C27_scaffold61G002090 [Cucumis melo var. makuwa] >TYK28373.1 uncharacterized protein E5676_scaffold600G002150 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 5.4e-06
Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 8   LETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGLVLE 46
           L  DFEFK YDDDEMLLPSNDE N+ED NEEH GLV E
Sbjct: 122 LRRDFEFKPYDDDEMLLPSNDEINYEDVNEEHSGLVHE 159

[Close]
BLAST of Cla97C07G132120 vs. NCBI nr
Match: KAA0063380.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-04
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 9   ETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGL 43
           + DFEFK YDDDE+LLPSNDE N+ED NEEH GL
Sbjct: 362 KADFEFKPYDDDEILLPSNDEINYEDINEEHRGL 395

[Close]
BLAST of Cla97C07G132120 vs. NCBI nr
Match: TYK11643.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-04
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 9   ETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGL 43
           + DFEFK YDDDE+LLPSNDE N+ED NEEH GL
Sbjct: 356 KADFEFKPYDDDEILLPSNDEINYEDINEEHRGL 389

[Close]
BLAST of Cla97C07G132120 vs. ExPASy TrEMBL
Match: A0A5D3DXE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G002150 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06
Identity = 30/38 (78.95%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 8   LETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGLVLE 46
           L  DFEFK YDDDEMLLPSNDE N+ED NEEH GLV E
Sbjct: 122 LRRDFEFKPYDDDEMLLPSNDEINYEDVNEEHSGLVHE 159

[Close]
BLAST of Cla97C07G132120 vs. ExPASy TrEMBL
Match: A0A5A7V818 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold508G00080 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-04
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 9   ETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGL 43
           + DFEFK YDDDE+LLPSNDE N+ED NEEH GL
Sbjct: 362 KADFEFKPYDDDEILLPSNDEINYEDINEEHRGL 395

[Close]
BLAST of Cla97C07G132120 vs. ExPASy TrEMBL
Match: A0A5D3CIA3 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00070 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-04
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 9   ETDFEFKSYDDDEMLLPSNDERNHEDTNEEHGGL 43
           + DFEFK YDDDE+LLPSNDE N+ED NEEH GL
Sbjct: 356 KADFEFKPYDDDEILLPSNDEINYEDINEEHRGL 389

The following BLAST results are available for this feature:
BLAST of Cla97C07G132120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048571.15.4e-0678.95uncharacterized protein E6C27_scaffold61G002090 [Cucumis melo var. makuwa] >TYK2... [more]
KAA0063380.13.8e-0476.47L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa][more]
TYK11643.13.8e-0476.47L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa][more]
BLAST of Cla97C07G132120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C07G132120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DXE52.6e-0678.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V8181.9e-0476.47L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... [more]
A0A5D3CIA31.9e-0476.47L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... [more]
BLAST of Cla97C07G132120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G132120.1Cla97C07G132120.1mRNA