Cla97C07G130390 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G130390
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	wound-induced basic protein-like
Location	Cla97Chr07: 2061721 .. 2063919 (+)
RNA-Seq Expression	Cla97C07G130390
Synteny	Cla97C07G130390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTACGACGTCAACTCTCCTCTGTTCCGCTCTTTCCTCAGCCAGAAGGGAGGAGGAGCCTACGACAAAAGGTATGCGATTCTCTTCTTTTCACCATGTTTACATTTAGATACCTATTTTTAGATATTTTTTTTTCCTTCGTAATGTAGTTCGTTAACTTGATCTTCTCTCTTCTCTGTAACTCTCTATTAGTTTGATTTTGGATTCTAGGTTGTTTTGATTTTCGTTTACTTCATTTTGCTTTTGTTTCGACTTTTGAGCTCTGGAAGCTATCTAATTAGTCTGTTATTGGCTTGTTTGATTGTGCTACTTTTTTATTTTCTTTAGAACTGAGTAAATTTCACTAGAGGCTGGAGAAGTTTAGTTTGTGGAATGGATAGTGAAATTTGTTTGAAATTGATCTGGCGAGCGAAATAACGGAGTATGAACTCTCTTGGAATTGGTAGCTTATTATCTGGCCATCTGTTCGGTCTTCGTATTGCTTTTTTGATCGATGTTTGCTCTCGAATCTTCCAAGTTTTATGTACTCCAAGCGTACTTGTTACTTGTTAGTGGAAAAGAATGAAGCATGATTTAAGTAGATATTCTATTTTAGTGTCATGCAGATTTTAATTGATATTAATGATCAAAAAGCATTTCGACAGGCGAACTGTACTGTACCATTAACTTCTACGGAAAACTTCTTAGCCTAGTTTAATTACTTGCGTTTTAGATTCCTTAAGACTTTGGATTTACCTGATTTGAATTCAGTATATAGCTAGCGACAACAGGTTGATTTAAACTTTCTAGTACAATTATGTTCTTTTTCTTTAAGATTTTCAAGTGTAAATTAAACCTTCTTTTGGAATCTTCTTTTGAAAGGAACAACAGACATTTAACAACACTGCCTTTAGCAATATTTTTCTTGAATTAATTTTAGTGCATTCTTTTATCTTGGTGTAAATGTTACTACACTGCCTTTAGCAATTTTAGTCTCAATGATTTTAGGCCCTTCTTGTTGGTAATTTCTTTGGCCTGGAGTTTAGGTTTCCTCCCTTTTGTAATAATTCATACTTCCAATCTGTTTTCTCTGTGTGTGTATATTTATATAGAAAAAAAGAAAGAACCAGAAAAGAGTGCATATTTCAATCCTTCAAAAGCGCATGACTGACTTATCTTTATATATTTTAGATATTTTGGATCTGGCCTGGCTTACTGCTTATTCTATGCGATATTATTACCTTGGTTTAAAGTTTATGATCAAACTGTAGTGAATATCTTATTAGACGAATCCTATAGATTAAAAATTGTGCCCCTCATTCCTTGTGTTTTCCTTTCTCATTATTCAACTTCCAGAATATCCTTAATTGTTTGTTGCTAATGATTAAGTCAGCAGTTAAAGGGGAAATGATTTTATTATTGTGTTGAATGCTTCTCTACTTTTTGAATTAGGCTAGAGTATGGCTTTACTTTCCTCAATGTCTTATCCCAAAAATAATAATAACAGAATATATTCTGTATTTTTGGAATGCATTTCCTCGATTTGTAATAATTGCATTGTTATGTTAGAAACGAGCATTTTGTCGTCTCTGATAATGTTGTTTTTGATGTTTACTTCAGAAAAACTGAGGAGCAGAAGCCCAAAGAGCAGAGATTCAAGGCCAATGAGAACAAGCCTGTCATGACTGAGTAATAACAACATGAATATGTAGGTTCTAGGTCATATTGTAGTCAAGTTTAAATTTCTTCAATGGAACCAGTTTTCACATTCCTTGTATGACTTTATTGAACATTCTGCCGCTGGAGCCTTTGGGCTTGCAATGAGCAAGTTTATTTCCTTCTAACTGAAAAGTTCGACATTGAGTCAATCTGCCCAAAATCTTCTTTAATCCAAGCACTTCTCTCTTTTATGATTTTATCTGTTGGTGGCCAAGCCTTTAATACCAATTTATGAGTGTTTTTGTCTCTGCTAAATGCTTTGCTCGTACGGTTGATGGAATGATGAAGCAAAGGTTTAATGTCTTTAATGATTATTCAATGGGGTCGGTTGATGACTGGAGAAAGGAATGATAATTGGAGTGGATTCATCCTTTCCATTCCTTTTTGACTGTTGATTGAATGCAGGACAAGCAGGAATATAATTATGTAACATTCGCATTGGACAAATACAAATGGAGAAGAATCCCTTCTTTCTTGGGCGATGGGAACAATATCTAA

mRNA sequence

ATGATCTACGACGTCAACTCTCCTCTGTTCCGCTCTTTCCTCAGCCAGAAGGGAGGAGGAGCCTACGACAAAAGAAAAACTGAGGAGCAGAAGCCCAAAGAGCAGAGATTCAAGGCCAATGAGAACAAGCCTGACAAGCAGGAATATAATTATGTAACATTCGCATTGGACAAATACAAATGGAGAAGAATCCCTTCTTTCTTGGGCGATGGGAACAATATCTAA

Coding sequence (CDS)

ATGATCTACGACGTCAACTCTCCTCTGTTCCGCTCTTTCCTCAGCCAGAAGGGAGGAGGAGCCTACGACAAAAGAAAAACTGAGGAGCAGAAGCCCAAAGAGCAGAGATTCAAGGCCAATGAGAACAAGCCTGACAAGCAGGAATATAATTATGTAACATTCGCATTGGACAAATACAAATGGAGAAGAATCCCTTCTTTCTTGGGCGATGGGAACAATATCTAA

Protein sequence

MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKPDKQEYNYVTFALDKYKWRRIPSFLGDGNNI

Homology

[Close]

BLAST of Cla97C07G130390 vs. NCBI nr
Match: XP_038888362.1 (wound-induced basic protein-like [Benincasa hispida])

HSP 1 Score: 90.1 bits (222), Expect = 8.5e-15
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP
Sbjct: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. NCBI nr
Match: KAE8650855.1 (hypothetical protein Csa_001262 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 4.2e-14
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNSPLFRSFL+QKGGGAYD+RKTEEQKPKEQRFKANENKP
Sbjct: 1  MIYDVNSPLFRSFLTQKGGGAYDRRKTEEQKPKEQRFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. NCBI nr
Match: XP_022963663.1 (wound-induced basic protein-like [Cucurbita moschata] >XP_022963664.1 wound-induced basic protein-like [Cucurbita moschata] >XP_022967355.1 wound-induced basic protein-like [Cucurbita maxima] >XP_023511445.1 wound-induced basic protein-like [Cucurbita pepo subsp. pepo] >XP_023511446.1 wound-induced basic protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.3 bits (207), Expect = 4.7e-13
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNS LFRSFLSQKGGGAYDKRK EEQKPKEQRFKANENKP
Sbjct: 1  MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. NCBI nr
Match: KAG7011336.1 (Wound-induced basic protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.3 bits (207), Expect = 4.7e-13
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNS LFRSFLSQKGGGAYDKRK EEQKPKEQRFKANENKP
Sbjct: 48 MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKP 91

[Close]

BLAST of Cla97C07G130390 vs. NCBI nr
Match: XP_022159697.1 (wound-induced basic protein-like [Momordica charantia])

HSP 1 Score: 80.9 bits (198), Expect = 5.2e-12
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNSPLFRSFLSQKGGG  DKRK EEQKPKEQ+FKANENKP
Sbjct: 1  MIYDVNSPLFRSFLSQKGGGDSDKRKIEEQKPKEQKFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. ExPASy Swiss-Prot
Match: Q09020 (Wound-induced basic protein OS=Phaseolus vulgaris OX=3885 GN=PR4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-12
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNSPLFRSFLSQKGG + DKRKTEEQKPKE R KA+ENKP
Sbjct: 1  MIYDVNSPLFRSFLSQKGGSS-DKRKTEEQKPKEHRPKASENKP 43

[Close]

BLAST of Cla97C07G130390 vs. ExPASy TrEMBL
Match: A0A6J1HKV4 (wound-induced basic protein-like OS=Cucurbita moschata OX=3662 GN=LOC111463924 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNS LFRSFLSQKGGGAYDKRK EEQKPKEQRFKANENKP
Sbjct: 1  MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. ExPASy TrEMBL
Match: A0A6J1HU85 (wound-induced basic protein-like OS=Cucurbita maxima OX=3661 GN=LOC111466900 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 42/44 (95.45%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNS LFRSFLSQKGGGAYDKRK EEQKPKEQRFKANENKP
Sbjct: 1  MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. ExPASy TrEMBL
Match: A0A6J1E0I7 (wound-induced basic protein-like OS=Momordica charantia OX=3673 GN=LOC111026038 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-12
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKP 45
          MIYDVNSPLFRSFLSQKGGG  DKRK EEQKPKEQ+FKANENKP
Sbjct: 1  MIYDVNSPLFRSFLSQKGGGDSDKRKIEEQKPKEQKFKANENKP 44

[Close]

BLAST of Cla97C07G130390 vs. ExPASy TrEMBL
Match: I1IIN9 (Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=100844108 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.5e-12
Identity = 40/48 (83.33%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKPDKQE 49
          MIYDVNSPLFRSFLSQKGG + DKRK EEQKPK+QRFKANENKP   E
Sbjct: 1  MIYDVNSPLFRSFLSQKGGASSDKRKMEEQKPKDQRFKANENKPVMNE 48

[Close]

BLAST of Cla97C07G130390 vs. ExPASy TrEMBL
Match: A0A1D5U586 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.5e-12
Identity = 40/48 (83.33%), Postives = 42/48 (87.50%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKPDKQE 49
          MIYDVNSPLFRSFLSQKGG + DKRK EEQKPK+QRFKANENKP   E
Sbjct: 1  MIYDVNSPLFRSFLSQKGGASSDKRKMEEQKPKDQRFKANENKPVMNE 48

[Close]

BLAST of Cla97C07G130390 vs. TAIR 10
Match: AT3G07230.1 (wound-responsive protein-related )

HSP 1 Score: 53.9 bits (128), Expect = 6.3e-08
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 1  MIYDVNSPLFRSFLSQKGGGAYDKRKTEEQKPKEQRFKANENKPDKQE 49
          MIYDVNS LFRSFLSQKG  + DKRK E+ KP+EQ+ KA++NKP   E
Sbjct: 1  MIYDVNSGLFRSFLSQKGSSS-DKRKMED-KPREQKPKASDNKPVMNE 46

The following BLAST results are available for this feature:

BLAST of Cla97C07G130390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888362.1	8.5e-15	100.00	wound-induced basic protein-like [Benincasa hispida]	[more]
KAE8650855.1	4.2e-14	95.45	hypothetical protein Csa_001262 [Cucumis sativus]	[more]
XP_022963663.1	4.7e-13	95.45	wound-induced basic protein-like [Cucurbita moschata] >XP_022963664.1 wound-indu...	[more]
KAG7011336.1	4.7e-13	95.45	Wound-induced basic protein, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022159697.1	5.2e-12	90.91	wound-induced basic protein-like [Momordica charantia]	[more]

BLAST of Cla97C07G130390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09020	4.1e-12	86.36	Wound-induced basic protein OS=Phaseolus vulgaris OX=3885 GN=PR4 PE=2 SV=1	[more]

BLAST of Cla97C07G130390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKV4	2.3e-13	95.45	wound-induced basic protein-like OS=Cucurbita moschata OX=3662 GN=LOC111463924 P...	[more]
A0A6J1HU85	2.3e-13	95.45	wound-induced basic protein-like OS=Cucurbita maxima OX=3661 GN=LOC111466900 PE=...	[more]
A0A6J1E0I7	2.5e-12	90.91	wound-induced basic protein-like OS=Momordica charantia OX=3673 GN=LOC111026038 ...	[more]
I1IIN9	9.5e-12	83.33	Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=100844108 PE=4 SV...	[more]
A0A1D5U586	9.5e-12	83.33	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1	[more]

BLAST of Cla97C07G130390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07230.1	6.3e-08	66.67	wound-responsive protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012643	Wound-inducible basic	PFAM	PF08186	Wound_ind	coord: 1..44 e-value: 9.2E-17 score: 61.2
IPR012643	Wound-inducible basic	PANTHER	PTHR36752	OS12G0405700 PROTEIN	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..44
None	No IPR available	PANTHER	PTHR36752:SF2	OS12G0405700 PROTEIN	coord: 1..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G130390.1	Cla97C07G130390.1	mRNA