Cla97C07G130340 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G130340
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Seed nucellus-specific protein
Location	Cla97Chr07: 2034781 .. 2035125 (-)
RNA-Seq Expression	Cla97C07G130340
Synteny	Cla97C07G130340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATCGGTAAGGTTCTCGTCACCATGTTCGTAGTCTTTGCAATGGCAATGGCACTTTTGGAAAATGTTGAAGGAGGAAGGGAGATGGCTGTTAAGGAAGCAACTGCAAAAGCTTATCCCCTGGTTTTAAATGAAAATTATGAGGGATACAAACCCAAGGAAGACTATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGCAACTGCGACAAATATCCTTACACTGAGGATGACGACCGTCAATACAACTGGAGTCCGTATAAGAAACCGGTGCCAAAGCCGAAAGAGATGGCTGGAAAGTATGGAGTTCACCAGAATTTCCCTTGA

mRNA sequence

ATGACGATCGGTAAGGTTCTCGTCACCATGTTCGTAGTCTTTGCAATGGCAATGGCACTTTTGGAAAATGTTGAAGGAGGAAGGGAGATGGCTGTTAAGGAAGCAACTGCAAAAGCTTATCCCCTGGTTTTAAATGAAAATTATGAGGGATACAAACCCAAGGAAGACTATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGCAACTGCGACAAATATCCTTACACTGAGGATGACGACCGTCAATACAACTGGAGTCCGTATAAGAAACCGGTGCCAAAGCCGAAAGAGATGGCTGGAAAGTATGGAGTTCACCAGAATTTCCCTTGA

Coding sequence (CDS)

ATGACGATCGGTAAGGTTCTCGTCACCATGTTCGTAGTCTTTGCAATGGCAATGGCACTTTTGGAAAATGTTGAAGGAGGAAGGGAGATGGCTGTTAAGGAAGCAACTGCAAAAGCTTATCCCCTGGTTTTAAATGAAAATTATGAGGGATACAAACCCAAGGAAGACTATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGCAACTGCGACAAATATCCTTACACTGAGGATGACGACCGTCAATACAACTGGAGTCCGTATAAGAAACCGGTGCCAAAGCCGAAAGAGATGGCTGGAAAGTATGGAGTTCACCAGAATTTCCCTTGA

Protein sequence

MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKEDYECDGYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKEMAGKYGVHQNFP

Homology

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BLAST of Cla97C07G130340 vs. NCBI nr
Match: AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 191.8 bits (486), Expect = 3.2e-45
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 3   IGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKEDYECDGY 62
           +GKVLV M V+ A+AMALLENVEGGREM +KEATA AYP VLNE YEGYKPKEDYECDGY
Sbjct: 4   VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYECDGY 63

Query: 63  KYKDKDCYEYGNCDKYPYT-EDDDRQYNWSPYKKPVPKPKEMAGKYGVHQNFP 115
           KYKDK+CYEYGNCDK PY  E+DDRQYN SPYKKP+PKPKEMA KYGVH NFP
Sbjct: 64  KYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]

BLAST of Cla97C07G130340 vs. NCBI nr
Match: KAA0068070.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-41
Identity = 87/123 (70.73%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNEN---------YEGY 60
           MTI KVL+ + VV A+AM LLENVEGGREMA K+ TAK YP  L++N         YEGY
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYKPKEDYEGY 60

Query: 61  KPKEDYECDGYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKEMAGKYGVHQ 115
           KPKEDYECDGYKYKDKDCYEYGNCDK PY ED D QYNW PYKKP+ KPKEM  KYGVHQ
Sbjct: 61  KPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKEMGEKYGVHQ 120

[Close]

BLAST of Cla97C07G130340 vs. NCBI nr
Match: KAE8650853.1 (hypothetical protein Csa_001704, partial [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 80/122 (65.57%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNEN------------- 60
           MTI KVLV + +V AMAMA LENVEGGREMA+K+ TAK Y   L+EN             
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 61  -----YEGYKPKEDYECDGYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKE 105
                YEGYKPKEDYECDGYKY DKDCYEYGNCDK PY ED D QYNW P KKP+ KPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

[Close]

BLAST of Cla97C07G130340 vs. NCBI nr
Match: KGN46573.1 (hypothetical protein Csa_005092 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28
Identity = 72/117 (61.54%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKED-YEC 60
           MT GK LV +     +AM  +ENVEG R+M +KEAT      VLNE  E Y P ED Y+C
Sbjct: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME-YNPNEDEYDC 61

Query: 61  DGYKYKDKDCYEYGNCDKYPY--TEDDDRQYNWSPYKKPVPKPKEMAGKYGVHQNFP 115
           DGYKYKDKDCY+YGNCDK PY  ++DDD QYNW+ YK PVPKPKE+  KY VH+NFP
Sbjct: 62  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]

BLAST of Cla97C07G130340 vs. NCBI nr
Match: TYK14008.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 9.7e-26
Identity = 66/107 (61.68%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKEDYECD 60
           M IGK LV +  +  + M  +ENVEGGREM +KEAT      V NEN + YKPKE+  CD
Sbjct: 2   MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVD-YKPKEEDGCD 61

Query: 61  GYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKEMAGKY 108
           GYKYKDKDCYEYGNC K PY + DD QYNW+ + KPVPKPKEM  KY
Sbjct: 62  GYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKEMDEKY 107

[Close]

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL
Match: O22351 (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45
Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 3   IGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKEDYECDGY 62
           +GKVLV M V+ A+AMALLENVEGGREM +KEATA AYP VLNE YEGYKPKEDYECDGY
Sbjct: 4   VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYECDGY 63

Query: 63  KYKDKDCYEYGNCDKYPYT-EDDDRQYNWSPYKKPVPKPKEMAGKYGVHQNFP 115
           KYKDK+CYEYGNCDK PY  E+DDRQYN SPYKKP+PKPKEMA KYGVH NFP
Sbjct: 64  KYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL
Match: A0A5A7VLH5 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00080 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41
Identity = 87/123 (70.73%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNEN---------YEGY 60
           MTI KVL+ + VV A+AM LLENVEGGREMA K+ TAK YP  L++N         YEGY
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYKPKEDYEGY 60

Query: 61  KPKEDYECDGYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKEMAGKYGVHQ 115
           KPKEDYECDGYKYKDKDCYEYGNCDK PY ED D QYNW PYKKP+ KPKEM  KYGVHQ
Sbjct: 61  KPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKEMGEKYGVHQ 120

[Close]

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL
Match: A0A0A0L8T2 (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 86/132 (65.15%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNEN------------- 60
           MTI KVLV + +V AMAMA LENVEGGREMA+K+ TAK Y   L+EN             
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 61  -----YEGYKPKEDYECDGYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKE 115
                YEGYKPKEDYECDGYKY DKDCYEYGNCDK PY ED D QYNW P KKP+ KPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

[Close]

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL
Match: A0A0A0KAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.7e-29
Identity = 72/117 (61.54%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKED-YEC 60
           MT GK LV +     +AM  +ENVEG R+M +KEAT      VLNE  E Y P ED Y+C
Sbjct: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKME-YNPNEDEYDC 61

Query: 61  DGYKYKDKDCYEYGNCDKYPY--TEDDDRQYNWSPYKKPVPKPKEMAGKYGVHQNFP 115
           DGYKYKDKDCY+YGNCDK PY  ++DDD QYNW+ YK PVPKPKE+  KY VH+NFP
Sbjct: 62  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL
Match: A0A5D3CS37 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00050 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.7e-26
Identity = 66/107 (61.68%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 1   MTIGKVLVTMFVVFAMAMALLENVEGGREMAVKEATAKAYPLVLNENYEGYKPKEDYECD 60
           M IGK LV +  +  + M  +ENVEGGREM +KEAT      V NEN + YKPKE+  CD
Sbjct: 2   MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVD-YKPKEEDGCD 61

Query: 61  GYKYKDKDCYEYGNCDKYPYTEDDDRQYNWSPYKKPVPKPKEMAGKY 108
           GYKYKDKDCYEYGNC K PY + DD QYNW+ + KPVPKPKEM  KY
Sbjct: 62  GYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKEMDEKY 107

The following BLAST results are available for this feature:

BLAST of Cla97C07G130340 vs. NCBI nr


Match Name	E-value	Identity	Description
AAB82329.1	3.2e-45	82.30	seed nucellus-specific protein [Citrullus lanatus]	[more]
KAA0068070.1	8.2e-41	70.73	Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucel...	[more]
KAE8650853.1	1.7e-33	65.57	hypothetical protein Csa_001704, partial [Cucumis sativus]	[more]
KGN46573.1	1.6e-28	61.54	hypothetical protein Csa_005092 [Cucumis sativus]	[more]
TYK14008.1	9.7e-26	61.68	Seed nucellus-specific protein [Cucumis melo var. makuwa]	[more]

BLAST of Cla97C07G130340 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
O22351	1.6e-45	82.30	Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1	[more]
A0A5A7VLH5	4.0e-41	70.73	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L8T2	1.8e-38	65.15	Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S...	[more]
A0A0A0KAR7	7.7e-29	61.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1	[more]
A0A5D3CS37	4.7e-26	61.68	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cla97C07G130340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G130340.1	Cla97C07G130340.1	mRNA