Cla97C06G126720 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G126720
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	transcription factor MYB98-like
Location	Cla97Chr06: 28454301 .. 28454745 (+)
RNA-Seq Expression	Cla97C06G126720
Synteny	Cla97C06G126720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTCTCTTCTACGGGGCTATACAAGGAGTCTGAATCTGGACTCCAATAACACCGCTCGCCACCAGAAGAAAAGCTCAGCCCCGACTCCTCCCCCGTCAACAATAATACCAAATCATAATCAGCCGATCATCATCGTCATCATCGAACACAAACCACTGATTTTTGCCCTAACGATCAGACGGTTCCGGATTTCGATTTCAAGGAAGAATCAGAGAATCAGAGGATATACGGTTTTATCTCGACGATAGTTTCTTTCCGGAAGGATGTAGCATCAACTCGCACATGGAGGATATTGTTGGCGCTTCTGTTGATGAAGCCAATAATTATGATCGGAAAATATATAACGAAAACGAAGAATCGGTAGATTTTCGCTGTGTTGAAGTGGAGAAATTACAGTATTGTGCTCCGGTGAGTGCGGCGGCGGCGGCGGGTATGAAGTAG

mRNA sequence

ATGTGCTCTCTTCTACGGGGCTATACAAGGAGTCTGAATCTGGACTCCAATAACACCGCTCGCCACCAGAAGAAAAGCTCAGCCCCGACTCCTCCCCCAATCAGAGAATCAGAGGATATACGGTTTTATCTCGACGATAGTTTCTTTCCGGAAGGATGTAGCATCAACTCGCACATGGAGGATATTGTTGGCGCTTCTGTTGATGAAGCCAATAATTATGATCGGAAAATATATAACGAAAACGAAGAATCGGTAGATTTTCGCTGTGTTGAAGTGGAGAAATTACAGTATTGTGCTCCGGTGAGTGCGGCGGCGGCGGCGGGTATGAAGTAG

Coding sequence (CDS)

ATGTGCTCTCTTCTACGGGGCTATACAAGGAGTCTGAATCTGGACTCCAATAACACCGCTCGCCACCAGAAGAAAAGCTCAGCCCCGACTCCTCCCCCAATCAGAGAATCAGAGGATATACGGTTTTATCTCGACGATAGTTTCTTTCCGGAAGGATGTAGCATCAACTCGCACATGGAGGATATTGTTGGCGCTTCTGTTGATGAAGCCAATAATTATGATCGGAAAATATATAACGAAAACGAAGAATCGGTAGATTTTCGCTGTGTTGAAGTGGAGAAATTACAGTATTGTGCTCCGGTGAGTGCGGCGGCGGCGGCGGGTATGAAGTAG

Protein sequence

MCSLLRGYTRSLNLDSNNTARHQKKSSAPTPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNENEESVDFRCVEVEKLQYCAPVSAAAAAGMK

Homology

[Close]

BLAST of Cla97C06G126720 vs. NCBI nr
Match: KAA0057864.1 (transcription factor MYB98-like [Cucumis melo var. makuwa] >TYJ98554.1 transcription factor MYB98-like [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-27
Identity = 78/142 (54.93%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSNN  RHQKKSSA                                 
Sbjct: 306 CSLLQDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCP 365

Query: 62  ---TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIY-NENEESV 108
              T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK Y N N+ESV
Sbjct: 366 NDWTVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNNNNDESV 425

[Close]

BLAST of Cla97C06G126720 vs. NCBI nr
Match: XP_008453673.1 (PREDICTED: transcription factor MYB98-like [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-27
Identity = 78/142 (54.93%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSNN  RHQKKSSA                                 
Sbjct: 308 CSLLQDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCP 367

Query: 62  ---TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIY-NENEESV 108
              T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK Y N N+ESV
Sbjct: 368 NDWTVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNNNNDESV 427

[Close]

BLAST of Cla97C06G126720 vs. NCBI nr
Match: XP_031736862.1 (transcription factor MYB98 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-27
Identity = 77/138 (55.80%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSN   RHQKKSSA                                 
Sbjct: 309 CSLLQDYIKSLNLDSNTAVRHQKKSSAAISSAVNNNNKSKSADHHYHHQVQTTDFCPNDW 368

Query: 62  TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNE-NEESVDFR 107
           T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK YN+ N+ESV+ R
Sbjct: 369 TVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNDNNDESVELR 428

[Close]

BLAST of Cla97C06G126720 vs. NCBI nr
Match: KGN63574.1 (hypothetical protein Csa_013746 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-27
Identity = 77/138 (55.80%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSN   RHQKKSSA                                 
Sbjct: 307 CSLLQDYIKSLNLDSNTAVRHQKKSSAAISSAVNNNNKSKSADHHYHHQVQTTDFCPNDW 366

Query: 62  TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNE-NEESVDFR 107
           T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK YN+ N+ESV+ R
Sbjct: 367 TVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNDNNDESVELR 426

[Close]

BLAST of Cla97C06G126720 vs. NCBI nr
Match: XP_023516757.1 (transcription factor MYB98-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24
Identity = 76/139 (54.68%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-----------------------------TPP 61
           CSLL+ Y +SLNLDS   ARHQKKSSA                              T P
Sbjct: 309 CSLLQDYIKSLNLDS-VAARHQKKSSATSAVNNTKSKVTDHHHHHQAQTTEFCPNDWTVP 368

Query: 62  PIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNENEESVDFRCVEV 111
                ++   YLDDSFFPEGCSINS MEDI GASVD+ANNYDRK YN+NEESV+FR VE+
Sbjct: 369 NFDFKDEPEIYLDDSFFPEGCSINSLMEDIAGASVDDANNYDRKRYNDNEESVEFRRVEM 428

[Close]

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL
Match: A0A5D3BHK8 (Transcription factor MYB98-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001700 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27
Identity = 78/142 (54.93%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSNN  RHQKKSSA                                 
Sbjct: 306 CSLLQDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCP 365

Query: 62  ---TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIY-NENEESV 108
              T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK Y N N+ESV
Sbjct: 366 NDWTVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNNNNDESV 425

[Close]

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL
Match: A0A1S3BWA8 (transcription factor MYB98-like OS=Cucumis melo OX=3656 GN=LOC103494322 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27
Identity = 78/142 (54.93%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSNN  RHQKKSSA                                 
Sbjct: 308 CSLLQDYIKSLNLDSNNAVRHQKKSSAAISSAVNNNTKSKSADHHHHHHHHQVQTTDFCP 367

Query: 62  ---TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIY-NENEESV 108
              T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK Y N N+ESV
Sbjct: 368 NDWTVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNNNNDESV 427

[Close]

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL
Match: A0A0A0LRG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004900 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.4e-27
Identity = 77/138 (55.80%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-------------------------------- 61
           CSLL+ Y +SLNLDSN   RHQKKSSA                                 
Sbjct: 307 CSLLQDYIKSLNLDSNTAVRHQKKSSAAISSAVNNNNKSKSADHHYHHQVQTTDFCPNDW 366

Query: 62  TPPPIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNE-NEESVDFR 107
           T P     E+  FYLDDSFFPEGCSINS MEDIVGASVDEANNYDRK YN+ N+ESV+ R
Sbjct: 367 TVPDFDFKEEPEFYLDDSFFPEGCSINSLMEDIVGASVDEANNYDRKRYNDNNDESVELR 426

[Close]

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL
Match: A0A6J1E0A8 (transcription factor MYB98-like OS=Cucurbita moschata OX=3662 GN=LOC111429667 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-24
Identity = 75/139 (53.96%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP-----------------------------TPP 61
           CSLL+ Y +SLNLD+   ARHQKKSSA                              T P
Sbjct: 309 CSLLQDYIKSLNLDT-VAARHQKKSSATSAVNNTKSKVTDHRHHHQAQITEFCPNDWTVP 368

Query: 62  PIRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNENEESVDFRCVEV 111
                ++   YLDDSFFPEGCSINS MEDI GASVD+ANNYDRK YN+NEESV+FR VE+
Sbjct: 369 NFDFKDEPEIYLDDSFFPEGCSINSLMEDIAGASVDDANNYDRKRYNDNEESVEFRRVEM 428

[Close]

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL
Match: A0A6J1JEG6 (transcription factor MYB98-like OS=Cucurbita maxima OX=3661 GN=LOC111485058 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.6e-23
Identity = 73/138 (52.90%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 2   CSLLRGYTRSLNLDSNNTARHQKKSSAP----------------------------TPPP 61
           CSLL+ Y +SLNLDS   ARHQKKSSA                             T P 
Sbjct: 309 CSLLQDYIKSLNLDS-VAARHQKKSSATSAVNNTKSKVADHHHHQTQTTEFCPNDWTVPN 368

Query: 62  IRESEDIRFYLDDSFFPEGCSINSHMEDIVGASVDEANNYDRKIYNENEESVDFRCVEVE 111
               ++   YLDDSFFPEGCSINS +EDI GA VD+ANNYDRK YN+NEESV+FR VE+E
Sbjct: 369 FDFKDEPEIYLDDSFFPEGCSINSLVEDIAGAYVDDANNYDRKRYNDNEESVEFRRVEME 428

The following BLAST results are available for this feature:

BLAST of Cla97C06G126720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057864.1	2.9e-27	54.93	transcription factor MYB98-like [Cucumis melo var. makuwa] >TYJ98554.1 transcrip...	[more]
XP_008453673.1	2.9e-27	54.93	PREDICTED: transcription factor MYB98-like [Cucumis melo]	[more]
XP_031736862.1	5.0e-27	55.80	transcription factor MYB98 [Cucumis sativus]	[more]
KGN63574.1	5.0e-27	55.80	hypothetical protein Csa_013746 [Cucumis sativus]	[more]
XP_023516757.1	2.3e-24	54.68	transcription factor MYB98-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C06G126720 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHK8	1.4e-27	54.93	Transcription factor MYB98-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BWA8	1.4e-27	54.93	transcription factor MYB98-like OS=Cucumis melo OX=3656 GN=LOC103494322 PE=4 SV=...	[more]
A0A0A0LRG5	2.4e-27	55.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004900 PE=4 SV=1	[more]
A0A6J1E0A8	2.5e-24	53.96	transcription factor MYB98-like OS=Cucurbita moschata OX=3662 GN=LOC111429667 PE...	[more]
A0A6J1JEG6	3.6e-23	52.90	transcription factor MYB98-like OS=Cucurbita maxima OX=3661 GN=LOC111485058 PE=4...	[more]

BLAST of Cla97C06G126720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G126720.2	Cla97C06G126720.2	mRNA