Cla97C06G126500 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G126500
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Location	Cla97Chr06: 28216692 .. 28217192 (-)
RNA-Seq Expression	Cla97C06G126500
Synteny	Cla97C06G126500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTACTGATGTAGAAGAGTCTCCTCCTTGCGAAGCCGATAAGTCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCGTGTTTTGGATCTCGCCGTGTGGCCACCGTCGGACCGTCGTGGTGGGAGCGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGTGGAGGTGGTGTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGAGGACGATATCGACGACTTCAATGGTTATCGGAACTTCTCTGCTCGTTACGCTTCAATTCCGGCGCCGTTGAAGACCGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA

mRNA sequence

ATGGCGTTTACTGATGTAGAAGAGTCTCCTCCTTGCGAAGCCGATAAGTCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCGTGTTTTGGATCTCGCCGTGTGGCCACCGTCGGACCGTCGTGGTGGGAGCGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGTGGAGGTGGTGTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGAGGACGATATCGACGACTTCAATGGTTATCGGAACTTCTCTGCTCGTTACGCTTCAATTCCGGCGCCGTTGAAGACCGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA

Coding sequence (CDS)

ATGGCGTTTACTGATGTAGAAGAGTCTCCTCCTTGCGAAGCCGATAAGTCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCGTGTTTTGGATCTCGCCGTGTGGCCACCGTCGGACCGTCGTGGTGGGAGCGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGTGGAGGTGGTGTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGAGGACGATATCGACGACTTCAATGGTTATCGGAACTTCTCTGCTCGTTACGCTTCAATTCCGGCGCCGTTGAAGACCGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA

Protein sequence

MAFTDVEESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGGVRAGKFQYDPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

Homology

[Close]

BLAST of Cla97C06G126500 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 328.2 bits (840), Expect = 4.2e-86
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MAFTDVEESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 60
           MAFTDVEE  PCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVHSEGR
Sbjct: 1   MAFTDVEEESPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSEGR 60

Query: 61  WWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGGVRAGKFQYDPLSYAMNF 120
           WWARGVR LLKLREWSEIVAGPRWKTFIRRFNRNRS GGGGGGVRAGKFQYDPLSYAMNF
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS-GGGGGGVRAGKFQYDPLSYAMNF 120

Query: 121 DEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 167
           DEGSRQIGEL+DDIDDFNGYRNFSARYASIPAPLKTGGT  KDVS+VA
Sbjct: 121 DEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTIIKDVSSVA 167

[Close]

BLAST of Cla97C06G126500 vs. NCBI nr
Match: XP_008453108.1 (PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MAFTDV--EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV  EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS-----GGGGGGGVRAGKFQYDP 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS     GGGGG GVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           LSYAMNFDEGSRQIGEL+DD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of Cla97C06G126500 vs. NCBI nr
Match: KAA0057881.1 (putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 159/175 (90.86%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MAFTDV--EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV  EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS-------GGGGGGGVRAGKFQY 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS       GGGGG GVRAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           DPLSYAMNFDEGSRQIGEL+DD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of Cla97C06G126500 vs. NCBI nr
Match: XP_011657987.1 (uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical protein Csa_013668 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 2.3e-84
Identity = 158/175 (90.29%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 1   MAFTDV-EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEG 60
           MAFTDV EESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNR--------SGGGGGGGVRAGKFQY 120
           RWW RGVR LLKLREWSEIVAGPRWKTFIRRFNRNR        SGGGGG GVRAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           DPLSYAMNFDEGSRQIGEL+DDIDDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of Cla97C06G126500 vs. NCBI nr
Match: XP_022988416.1 (uncharacterized protein LOC111485666 [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77
Identity = 143/171 (83.63%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MAFTDVEESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 60
           MA+ D EE PP EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVHSEGR
Sbjct: 1   MAYPDAEEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEGR 60

Query: 61  WWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGGV---RAGKFQYDPLSYA 120
           WWARGVR +LK+REWSEIVAGPRWKTFIRRFNRNR+GGGGGGG    R GKFQYDPLSYA
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGAAAGRPGKFQYDPLSYA 120

Query: 121 MNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 167
           MNFDEGSRQIGEL+DD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 121 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of Cla97C06G126500 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-85
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MAFTDV--EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV  EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS-----GGGGGGGVRAGKFQYDP 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS     GGGGG GVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           LSYAMNFDEGSRQIGEL+DD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of Cla97C06G126500 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-85
Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MAFTDV--EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV  EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS-----GGGGGGGVRAGKFQYDP 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS     GGGGG GVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           LSYAMNFDEGSRQIGEL+DD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of Cla97C06G126500 vs. ExPASy TrEMBL
Match: A0A5A7UWM1 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001790 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 159/175 (90.86%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MAFTDV--EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV  EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS-------GGGGGGGVRAGKFQY 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS       GGGGG GVRAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           DPLSYAMNFDEGSRQIGEL+DD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of Cla97C06G126500 vs. ExPASy TrEMBL
Match: A0A0A0LUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 158/175 (90.29%), Postives = 162/175 (92.57%), Query Frame = 0


Query: 1   MAFTDV-EESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEG 60
           MAFTDV EESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNR--------SGGGGGGGVRAGKFQY 120
           RWW RGVR LLKLREWSEIVAGPRWKTFIRRFNRNR        SGGGGG GVRAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 167
           DPLSYAMNFDEGSRQIGEL+DDIDDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of Cla97C06G126500 vs. ExPASy TrEMBL
Match: A0A6J1JH52 (uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 143/171 (83.63%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MAFTDVEESPPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 60
           MA+ D EE PP EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVHSEGR
Sbjct: 1   MAYPDAEEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEGR 60

Query: 61  WWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGGV---RAGKFQYDPLSYA 120
           WWARGVR +LK+REWSEIVAGPRWKTFIRRFNRNR+GGGGGGG    R GKFQYDPLSYA
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGAAAGRPGKFQYDPLSYA 120

Query: 121 MNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 167
           MNFDEGSRQIGEL+DD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 121 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of Cla97C06G126500 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-26
Identity = 70/172 (40.70%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 8   ESPP-CEADKSNSL---LPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHSEGRW 67
           +SPP  E D ++ +   L   R  CF + C  S + +T G S WW+RI    ++  + RW
Sbjct: 4   QSPPIAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERW 63

Query: 68  WARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGGV----------------- 127
           W RG R   ++REWSE+VAGPRWKT+IRRF R+   GGGGG V                 
Sbjct: 64  WIRGWR---RMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSS 123

Query: 128 RAGKFQYDPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKT 157
             GKF+YD LSY++NFD+G+ Q G  +D+      YR++S R+A+   P+ T
Sbjct: 124 DQGKFRYDQLSYSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of Cla97C06G126500 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-25
Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 3   FTDVEESPPCEADKSNSL---LPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHS 62
           F  +E  P  E D ++ +   +   R  CF L C GS + +   G  WW+RIR   ++  
Sbjct: 583 FMGLESFPISEMDATDEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEP 642

Query: 63  EGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNR--SGGGGGGGVRAG--KFQYDP 122
           + RWW  G    +K+REWSEIVAGP+WKTFIRRF RN   +GG  GG  R     F+YD 
Sbjct: 643 DERWWVSG---WMKMREWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDS 702

Query: 123 LSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIPAPLKT 157
            SY++NFD+G +Q G  ED+      YR++S R+A+   P+ T
Sbjct: 703 WSYSLNFDDG-KQTGHFEDEFP----YRDYSMRFAAPSLPVST 737

[Close]

BLAST of Cla97C06G126500 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24
Identity = 58/111 (52.25%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 41  TVGPSWWERIRASQVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGG 100
           TV  SWW+RI  +  H E RWW   VRA LK+REWSEIVAGPRWKTFIRRFNR+   G  
Sbjct: 19  TVKSSWWQRIHRNN-HQEPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 78

Query: 101 GGGVRAGKFQYDPLSYAMNFDEGSRQIGELEDDIDDFNGYRNFSARYASIP 152
                + KF+YDP+SY ++F++  +     +DD     G R+FS RYAS+P
Sbjct: 79  WDD--SDKFRYDPVSYTLSFEDEDKD----DDDEAGVGGVRSFSMRYASVP 119

[Close]

BLAST of Cla97C06G126500 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 108.2 bits (269), Expect = 6.3e-24
Identity = 68/134 (50.75%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 25  RCGCFRLSCFGSRRVATVGPSWWERIRA--SQVHS-----EGRWWARGVRALLKLREWSE 84
           RC CF  S   SR    VG S W RIR      HS     E RWW   +RA LK+REWSE
Sbjct: 19  RCCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSE 78

Query: 85  IVAGPRWKTFIRRFNRNRSGGGGGGGVRAGKFQYDPLSYAMNFDEGSRQIGELEDDIDDF 144
           IVAGPRWKTFIRRFNR+   G       + KFQYDPLSY++NFD+        ED+    
Sbjct: 79  IVAGPRWKTFIRRFNRDPRRGRDWDA--SEKFQYDPLSYSLNFDDDDE-----EDEYVGL 138

Query: 145 NGYRNFSARYASIP 152
            G R+FS R+AS+P
Sbjct: 139 GGLRSFSTRFASVP 141

[Close]

BLAST of Cla97C06G126500 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-05
Identity = 28/70 (40.00%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 54  QVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGGVRAGKFQYDP 113
           Q    G W   G   L  L+E SE +AGP+WK FIR F+  R         R   F YD 
Sbjct: 51  QEERRGNW---GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMR-----RDVDFTYDL 110

Query: 114 LSYAMNFDEG 124
            +Y++NFD+G
Sbjct: 111 KNYSLNFDDG 112

The following BLAST results are available for this feature:

BLAST of Cla97C06G126500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878924.1	4.2e-86	94.64	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
XP_008453108.1	2.1e-85	91.91	PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putat...	[more]
KAA0057881.1	3.5e-85	90.86	putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]	[more]
XP_011657987.1	2.3e-84	90.29	uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical ...	[more]
XP_022988416.1	3.5e-77	83.63	uncharacterized protein LOC111485666 [Cucurbita maxima]	[more]

BLAST of Cla97C06G126500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C06G126500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BK38	1.0e-85	91.91	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BVG0	1.0e-85	91.91	uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=...	[more]
A0A5A7UWM1	1.7e-85	90.86	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A0A0LUB2	1.1e-84	90.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1	[more]
A0A6J1JH52	1.7e-77	83.63	uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666...	[more]

BLAST of Cla97C06G126500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01430.1	2.3e-26	40.70	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT5G14890.1	9.8e-25	41.72	NHL domain-containing protein	[more]
AT3G48020.1	2.8e-24	52.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G62865.1	6.3e-24	50.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25240.1	1.3e-05	40.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 10..163
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 10..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G126500.1	Cla97C06G126500.1	mRNA