Cla97C06G122060 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTGTTTTCATTTAAAATTTTAGACACAAACATTTTCGGTACTGTAATTACTAAAAAAAAAGTTTACTCTCTTTTTTTCAAGTGTAGTCTGATCATTTAAAATGTTTATAACCATCAAATCAGTGGATAGATTATGTAAACAAAAATACCAGAAAAATTATATATTTTTTAAAAGAATTGTTTTTTCGGTTGGAAAATCTAAGATTCTCATAAAATGCCTTCAAATTTACCAAAAACTATAAAATAGATGTATAGTTGATATATAATTACTTAACATATTTTCAAGGGATGTTCTTAAATATGGCAAAATTGTTGAAAATAATTATAAATATAGCAAAATTTCTGTGATAAATCAGATATCTATCACTTTAGCGATAGACAATAATAACGGTCTATCACAAATAAAATTTGTAATTTAATAATTTTATCATTTAAGATAATTTTCTTATTTTTTAACTTTTTTCTGAAAAAATAAACATATAGGAATATATAATATACATTAAACAAATTGAAATTTGACTAATCATGTCATATGACAAAAATTTCGTTACAGTAGAGTAGATTAACACAAAAACACATACCAATCATTGTAAGGCAGGAATTCTCCATTACTCAAGAGATACACACAGACTAATTCTTTTTTTTTAAAAAAAAAAAAAATATATATATATATATATATATATATGAACAGACCGTAGGTATATGTATATTTTCATTTTTAGACCAAAACAAGCAAAATAGTTGTATTGTAGTCTCCTTCACTCAAAAGAATTTTTGAAAAGGAAACCATGAACTTAGGTGCTAGTCTAACTGTTGCTCTAAAAATATTTACCATATATGTATCAATTTATGATGGAGAGTTCAGTGAACTAATGCATTCAAGTATATATATATTTAAAGTATTTTTCTTTTATTGTGAGACATTAAAAAAAATATATATGTGTGTGTGTGTGTGTGTGCAGCTCATGCATCAAAATATTGGTGACGTAAATTTGGAGTGCACTAAAATTAGTGGAGAAACCGAGGAGGAGTGGGCAACAAAAAGTCAGTAATGAAATTCACTTTCCATTGTCAAACTCTCTCCCGCACCAACTTCTTTAATAATTCACCACTTCAATTCCACATAGTTATATGATTAACTACAATCAATCATTCACATAAAAAAAATATTGGCAGCAGCCTTCCACTTCTAAAGAATATTAACACTTGTCCAAACGCCATAATCTTCAAACAATTTTGAGCATCCTCAGCCACAGAATTTGCCCCCCGCAAGCTTTTTGTAGTGGCCACCTCATCGTACCATTTCAAAAATGGCCCCAACAGCCTTCTCAGCAAATTTTATTATAAATATCTCCCCTCAAGCCTCCCCCATAATGCCCACATCAAACCGTTAAACCCTAAACCCTAGAGAACTTAATTTGTTTAAACAATGCCTTCAATCAAGTCCCTTGCGGTTGCTGTTTGCTTTTTACTCTCTTTTTCCGCCATTCTCTCTGAAGGTCGAGTCGCCAGAAAGGATCTCGGGATTGACCTTGGGGGAGTCGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCTTAGGTGGAAGTGGTTCTGGCTCCGGTTCTGGCTCTGGGTCGAGTTCATCTTCATCTTCTTCATCATACTCCTCCAGCTCAAGCTCTGGGTCCGGAGCTGGGTCCGAAGCTGGCTCGTACGCAGGGTCTCGAGCAGGGTCAGGTTCGGGTGGAAACAGGAATGGAGGGTCGGGATCTGGTTCGGGATATGGCGGAGGTTGGGGCAGAGGAGGCGGTGAAGGTCATGGCTATGGAGGAGGCAACTAA ATGTTATTGTTTTCATTTAAAATTTTAGACACAAACATTTTCGGTACTCTCATGCATCAAAATATTGGTGACGTAAATTTGGAGTGCACTAAAATTAGTGGAGAAACCGAGGAGGAGTGGGCAACAAAAAGTCGAGTCGCCAGAAAGGATCTCGGGATTGACCTTGGGGGAGTCGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCTTAGGTGGAAGTGGTTCTGGCTCCGGTTCTGGCTCTGGGTCGAGTTCATCTTCATCTTCTTCATCATACTCCTCCAGCTCAAGCTCTGGGTCCGGAGCTGGGTCCGAAGCTGGCTCGTACGCAGGGTCTCGAGCAGGGTCAGGTTCGGGTGGAAACAGGAATGGAGGGTCGGGATCTGGTTCGGGATATGGCGGAGGTTGGGGCAGAGGAGGCGGTGAAGGTCATGGCTATGGAGGAGGCAACTAA ATGTTATTGTTTTCATTTAAAATTTTAGACACAAACATTTTCGGTACTCTCATGCATCAAAATATTGGTGACGTAAATTTGGAGTGCACTAAAATTAGTGGAGAAACCGAGGAGGAGTGGGCAACAAAAAGTCGAGTCGCCAGAAAGGATCTCGGGATTGACCTTGGGGGAGTCGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCTTAGGTGGAAGTGGTTCTGGCTCCGGTTCTGGCTCTGGGTCGAGTTCATCTTCATCTTCTTCATCATACTCCTCCAGCTCAAGCTCTGGGTCCGGAGCTGGGTCCGAAGCTGGCTCGTACGCAGGGTCTCGAGCAGGGTCAGGTTCGGGTGGAAACAGGAATGGAGGGTCGGGATCTGGTTCGGGATATGGCGGAGGTTGGGGCAGAGGAGGCGGTGAAGGTCATGGCTATGGAGGAGGCAACTAA MLLFSFKILDTNIFGTLMHQNIGDVNLECTKISGETEEEWATKSRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSGSGSGYGGGWGRGGGEGHGYGGGN Homology
BLAST of Cla97C06G122060 vs. NCBI nr
Match: XP_038879748.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida]) HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21 Identity = 101/125 (80.80%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Cla97C06G122060 vs. NCBI nr
Match: XP_008443813.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]) HSP 1 Score: 110.9 bits (276), Expect = 9.5e-21 Identity = 101/131 (77.10%), Postives = 105/131 (80.15%), Query Frame = 0
BLAST of Cla97C06G122060 vs. NCBI nr
Match: XP_022921883.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]) HSP 1 Score: 107.8 bits (268), Expect = 8.0e-20 Identity = 96/122 (78.69%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of Cla97C06G122060 vs. NCBI nr
Match: XP_004146660.2 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypothetical protein Csa_020101 [Cucumis sativus]) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19 Identity = 99/125 (79.20%), Postives = 102/125 (81.60%), Query Frame = 0
BLAST of Cla97C06G122060 vs. NCBI nr
Match: XP_023515819.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 105.5 bits (262), Expect = 4.0e-19 Identity = 95/122 (77.87%), Postives = 101/122 (82.79%), Query Frame = 0
BLAST of Cla97C06G122060 vs. ExPASy TrEMBL
Match: A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 4.6e-21 Identity = 101/131 (77.10%), Postives = 105/131 (80.15%), Query Frame = 0
BLAST of Cla97C06G122060 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 3.9e-20 Identity = 96/122 (78.69%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of Cla97C06G122060 vs. ExPASy TrEMBL
Match: A0A0A0LTK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 6.6e-20 Identity = 99/125 (79.20%), Postives = 102/125 (81.60%), Query Frame = 0
BLAST of Cla97C06G122060 vs. ExPASy TrEMBL
Match: A0A6J1C497 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111007250 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18 Identity = 98/126 (77.78%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of Cla97C06G122060 vs. ExPASy TrEMBL
Match: A0A6J1JK06 (putative glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485793 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 6.2e-18 Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Cla97C06G122060 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein ) HSP 1 Score: 78.2 bits (191), Expect = 6.3e-15 Identity = 82/115 (71.30%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Cla97C06G122060 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14 Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|