Cla97C06G117850 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G117850
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr06: 10378335 .. 10379122 (-)
RNA-Seq ExpressionCla97C06G117850
SyntenyCla97C06G117850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATGCAAAAGCCCGTCCGCGGGTTAACTCTTTCTTGATCAAACAAGGCTATGTCTCTCCTGCTCTCCGAACTCCATCGCCATCCTTCTTCAATCCTTCATCCGCTCGTTCAGTGGTTCTTCCGCACGCTCTTAAAACTCCATACCGATTCAGGTTAACAAATATTCATATTCTATAATTCTTTTTACTCCTATCCCTCGCCGAGAATCTGGTGTGAGGGCATAAATTAGTAATTGGGTTTGTGTATTGATGGCTGAATTATGGTCCAAAACCCCCAAAATCTTAAGAATTTTACATAGCTCTGATATTTTACTATTGCCCAATTCTATCCATGAAATATACTTGAAAGTTTCAGTTTGATTTGGGACATGAGCACCAACTGTTTGAAGAAATGCCGCTGAGAAATTGACTTGTGATTGGGAACCCTTCTCTATTATGGGGTCACGCAACCCTTTTACTTTCATTCTGATGTCTTCAATTTTTCTTTTACTTCTTCTTTTCAGTTTGAGAAATGGCGAAAGGTATCGTATGGGCAACAGCAGAGGATTTGGCGAGGAACCGTGGGCGTGTTATATCACTCTATCGCCAGATATTGCGGAGCCTCAACTCCCCAAATTTGCCTCTCAGCTTTGCAGCTAGATTAGCAAAGAAGGCGGAAGTTCGTGGTATTTTCTTGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGACCTCATTGATACTGCTGAGTACTCCCTCTCTCTTTTAAAAAGGGGAGAAATTCCCAAATATATTCAATGA

mRNA sequence

ATGGTTATGCAAAAGCCCGTCCGCGGGTTAACTCTTTCTTGATCAAACAAGGCTATGTCTCTCCTGCTCTCCGAACTCCATCGCCATCCTTCTTCAATCCTTCATCCGCTCGTTCAGTGGTTCTTCCGCACGCTCTTAAAACTCCATACCGATTCAGAAATGGCGAAAGGTATCGTATGGGCAACAGCAGAGGATTTGGCGAGGAACCGTGGGCGTGTTATATCACTCTATCGCCAGATATTGCGGAGCCTCAACTCCCCAAATTTGCCTCTCAGCTTTGCAGCTAGATTAGCAAAGAAGGCGGAAGTTCGTGGTATTTTCTTGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGACCTCATTGATACTGCTGAGTACTCCCTCTCTCTTTTAAAAAGGGGAGAAATTCCCAAATATATTCAATGA

Coding sequence (CDS)

ATGTCTCTCCTGCTCTCCGAACTCCATCGCCATCCTTCTTCAATCCTTCATCCGCTCGTTCAGTGGTTCTTCCGCACGCTCTTAAAACTCCATACCGATTCAGAAATGGCGAAAGGTATCGTATGGGCAACAGCAGAGGATTTGGCGAGGAACCGTGGGCGTGTTATATCACTCTATCGCCAGATATTGCGGAGCCTCAACTCCCCAAATTTGCCTCTCAGCTTTGCAGCTAGATTAGCAAAGAAGGCGGAAGTTCGTGGTATTTTCTTGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGACCTCATTGATACTGCTGAGTACTCCCTCTCTCTTTTAAAAAGGGGAGAAATTCCCAAATATATTCAATGA

Protein sequence

MSLLLSELHRHPSSILHPLVQWFFRTLLKLHTDSEMAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEERSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ
Homology
[Close]
BLAST of Cla97C06G117850 vs. NCBI nr
Match: XP_038874375.1 (uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874377.1 uncharacterized protein LOC120067065 [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 2.9e-39
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1   MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. NCBI nr
Match: KAG7013408.1 (putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.8 bits (434), Expect = 3.8e-39
Identity = 87/90 (96.67%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 129 MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 188

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 189 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 218

[Close]
BLAST of Cla97C06G117850 vs. NCBI nr
Match: XP_022958896.1 (uncharacterized protein LOC111460046 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 3.8e-39
Identity = 87/90 (96.67%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. NCBI nr
Match: XP_023547728.1 (uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 8.4e-39
Identity = 86/90 (95.56%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASE+
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASED 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. NCBI nr
Match: XP_008457166.1 (PREDICTED: uncharacterized protein LOC103496906 [Cucumis melo] >XP_031736881.1 uncharacterized protein LOC101207229 [Cucumis sativus] >KAA0039619.1 uncharacterized protein E6C27_scaffold744G00990 [Cucumis melo var. makuwa] >TYK01687.1 uncharacterized protein E5676_scaffold775G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 3.2e-38
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. ExPASy TrEMBL
Match: A0A6J1H3E8 (uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC111460046 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39
Identity = 87/90 (96.67%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. ExPASy TrEMBL
Match: A0A5A7TEG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00090 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. ExPASy TrEMBL
Match: A0A0A0LL01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. ExPASy TrEMBL
Match: A0A1S3C4V6 (uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           RSLHNIEDLIDTAEYSLSLL++GEIPKYIQ
Sbjct: 61  RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. ExPASy TrEMBL
Match: A0A6J1L292 (uncharacterized protein LOC111499185 OS=Cucurbita maxima OX=3661 GN=LOC111499185 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.4e-38
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 36  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 95
           MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE
Sbjct: 1   MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 96  RSLHNIEDLIDTAEYSLSLLKRGEIPKYIQ 126
           R+LHNIEDLIDTAEYSLSLL++GEI KYIQ
Sbjct: 61  RALHNIEDLIDTAEYSLSLLRKGEIAKYIQ 90

[Close]
BLAST of Cla97C06G117850 vs. TAIR 10
Match: AT1G65032.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 38  KGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEERS 97
           K ++W TAE+ A+NRG+V+SLYRQ+LRS+NSP L LS+A+RLAKKAEVR IFL  SEE S
Sbjct: 2   KSLIWLTAEEAAKNRGKVLSLYRQLLRSINSPKLQLSYASRLAKKAEVRTIFLFGSEEIS 61

Query: 98  LHNIEDLIDTAEYSLSLLKRGEIP 122
            HN+ DLI T EY+LS LK+G+IP
Sbjct: 62  KHNVADLIRTGEYALSQLKQGKIP 85

The following BLAST results are available for this feature:
BLAST of Cla97C06G117850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038874375.12.9e-3997.78uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 unchara... [more]
KAG7013408.13.8e-3996.67putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyr... [more]
XP_022958896.13.8e-3996.67uncharacterized protein LOC111460046 [Cucurbita moschata][more]
XP_023547728.18.4e-3995.56uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo][more]
XP_008457166.13.2e-3894.44PREDICTED: uncharacterized protein LOC103496906 [Cucumis melo] >XP_031736881.1 u... [more]
BLAST of Cla97C06G117850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C06G117850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H3E81.8e-3996.67uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC1114600... [more]
A0A5A7TEG51.5e-3894.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LL011.5e-3894.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1[more]
A0A1S3C4V61.5e-3894.44uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=... [more]
A0A6J1L2923.4e-3894.44uncharacterized protein LOC111499185 OS=Cucurbita maxima OX=3661 GN=LOC111499185... [more]
BLAST of Cla97C06G117850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G65032.11.8e-2666.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36724COMPLEX 1 LYR-LIKE PROTEINcoord: 29..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G117850.2Cla97C06G117850.2mRNA