Homology
BLAST of Cla97C06G116850 vs. NCBI nr
Match:
XP_038906743.1 (splicing factor U2af large subunit B [Benincasa hispida])
HSP 1 Score: 1558.5 bits (4034), Expect = 0.0e+00
Identity = 842/973 (86.54%), Postives = 876/973 (90.03%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+T+SCSKQYSRRSKKQT SNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS
Sbjct: 1 MSTYSCSKQYSRRSKKQTPSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSIEESAKDSSRRKKEETLLKDNMVVRSD 120
RRESIDKHS DNRASER++RHSKGSSLDVQNLS EESAKDSSRRKKEETLLKDNMVVRSD
Sbjct: 61 RRESIDKHSIDNRASERHVRHSKGSSLDVQNLSFEESAKDSSRRKKEETLLKDNMVVRSD 120
Query: 121 RNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAGK 180
RNNYESGLSLMSKLKYD+NGKDK +KYGQENLGW K DQSSRIDI+TETGKRHSRDTAGK
Sbjct: 121 RNNYESGLSLMSKLKYDKNGKDKRQKYGQENLGWEKIDQSSRIDIDTETGKRHSRDTAGK 180
Query: 181 DRREDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHY 240
DRREDH RGKFERE+KRKSQNGDDDRNRDKY AKRHDHGKHHDLENRERKEAKVSLTSHY
Sbjct: 181 DRREDHDRGKFERESKRKSQNGDDDRNRDKYNAKRHDHGKHHDLENRERKEAKVSLTSHY 240
Query: 241 EDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDR 300
EDSRLKRRRKRS DRES+HRRSVSLSPRPHKHSTKL RQKELPL+SHVKKSGRWRSDSDR
Sbjct: 241 EDSRLKRRRKRSPDRESRHRRSVSLSPRPHKHSTKLTRQKELPLESHVKKSGRWRSDSDR 300
Query: 301 TGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKV 360
TGDF+NTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSP +SPEKKNEVLD+PPTEKV
Sbjct: 301 TGDFSNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPVQSPEKKNEVLDLPPTEKV 360
Query: 361 KLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
LFSGSVTSNFQPPNPTVSLGISNDQSGG LFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ
Sbjct: 361 GLFSGSVTSNFQPPNPTVSLGISNDQSGGTLFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
Query: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQAL 480
LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDR QAL
Sbjct: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQAL 480
Query: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYY 540
VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIV
Sbjct: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIV----------------------- 540
Query: 541 HVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFG 600
TGDLDKSV VVN+ISDVVEDSPNKIIVAGISNRIS +MLRDIVTAFG
Sbjct: 541 -------------TGDLDKSVQVVNKISDVVEDSPNKIIVAGISNRISPKMLRDIVTAFG 600
Query: 601 CLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNG 660
LKAYHFEMNDD+NEPCAFLEYVD+SVVSKACAGLNGMKIGGE+LKVFPAV FASTE +G
Sbjct: 601 RLKAYHFEMNDDLNEPCAFLEYVDESVVSKACAGLNGMKIGGEILKVFPAVRFASTEHHG 660
Query: 661 CQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVL 720
CQPCYGIPEHVKPLLQQ SVVLKVNNV FNADVLPVLSESDIDEVL
Sbjct: 661 CQPCYGIPEHVKPLLQQSSVVLKVNNV---------------FNADVLPVLSESDIDEVL 720
Query: 721 EDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRNN 780
EDIRFECARFGTVKS+NFVKPCNGC+SAEEEYKKIS DVTDVE+KHEIQENSTMVISRN+
Sbjct: 721 EDIRFECARFGTVKSLNFVKPCNGCISAEEEYKKIS-DVTDVEVKHEIQENSTMVISRNS 780
Query: 781 NDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENASE 840
NDLEDN NLDNCPNDTNQKQ N R QDEG+E KFCQ+GND+A+CFE V ENASE
Sbjct: 781 NDLEDNNPNLDNCPNDTNQKQGN-----RHQDEGVEGKFCQMGNDNASCFE-VGCENASE 840
Query: 841 RIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCL-DSPMVVDDNEKKALNGLDP 900
RIPQ +S+QR SPE ELQNAK AEIIETDETGSDKK VC DS MVV DNEKKALNGLDP
Sbjct: 841 RIPQEISEQRRSPEIELQNAK-AEIIETDETGSDKKLVCPDDSSMVVADNEKKALNGLDP 900
Query: 901 MVRTGSDASDKSEKKDPNNNLESLFVLGSVFVEFGRMEASCMAAHSLHGRIYDGQEISIE 960
MVRTGS A +KSEKKDP NN+ESLFVLGSVFVEFGRMEA+CMAAHSLHGRIYDGQEISIE
Sbjct: 901 MVRTGSGAFEKSEKKDPGNNVESLFVLGSVFVEFGRMEAACMAAHSLHGRIYDGQEISIE 914
Query: 961 YIPYDVYRKRFPK 973
YIP+D+YRKRFPK
Sbjct: 961 YIPHDLYRKRFPK 914
BLAST of Cla97C06G116850 vs. NCBI nr
Match:
XP_008460665.1 (PREDICTED: splicing factor U2af large subunit B isoform X2 [Cucumis melo])
HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 796/1064 (74.81%), Postives = 849/1064 (79.79%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+THSCSKQYSRRSKKQT+SNS+DE+AARTRP SFEDIMLRRK KGS+ATVEV T
Sbjct: 1 MSTHSCSKQYSRRSKKQTRSNSDDETAARTRPFSFEDIMLRRKTKGSSATVEVDVT---- 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSI-EESAKDSSRRKKEETLLKDNMVVRS 120
STDNRASER+ RHSKGSSLDVQN+S+ EESAKDSSRRKKEET+LK+N+VVR+
Sbjct: 61 --------STDNRASERHFRHSKGSSLDVQNVSLEEESAKDSSRRKKEETVLKNNIVVRN 120
Query: 121 DRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAG 180
DRNNYESGLSLMSKLK+DRN KD+ EKYGQENLGWGKNDQS RIDIETET KRHSRDTA
Sbjct: 121 DRNNYESGLSLMSKLKHDRNEKDEREKYGQENLGWGKNDQSCRIDIETETAKRHSRDTAF 180
Query: 181 KDRREDHGRGKFERE--------------------------------------------- 240
KDRR+DHGRG+FERE
Sbjct: 181 KDRRQDHGRGEFERESKRKSQNGDDDRNRDSKRKSQNGDDDRNRDSKRKSQNGDDDRSRD 240
Query: 241 ---------------------------------------------NKRKSQNGDDDRNRD 300
+KRKSQNGDDDRNRD
Sbjct: 241 SKRKSQNGDDDRNRDSKRKSQNGDDERNRDGKRKSQNGDDDRNRDSKRKSQNGDDDRNRD 300
Query: 301 KYIAKRHDHGKHHDLENRERKEAKVSLTSHYEDSRLKRRRKRSRDRESKHRRSVSLSPRP 360
KYIAKRHDHGKHHDLENRE+KEA VSLTS Y+DSRLKR RKRS DRESKHRRSVSLSPR
Sbjct: 301 KYIAKRHDHGKHHDLENREKKEAIVSLTSRYQDSRLKRTRKRSSDRESKHRRSVSLSPRS 360
Query: 361 HKHSTKLARQKELPLDSHVKKSGRWRSDSDRTGDFTNTSNSQYRRHSGSTSGLGGYSPRK 420
HKHSTKLARQKELPLDSHVKKSGRWRSDS+RTGDFTNTSNSQYRRHSGSTSGLGGYSPRK
Sbjct: 361 HKHSTKLARQKELPLDSHVKKSGRWRSDSERTGDFTNTSNSQYRRHSGSTSGLGGYSPRK 420
Query: 421 RRTESAVKTPSPARSPEKKNEVLDVPPTEKVKLFSGSVTSNFQPPNPTVSLGISNDQSGG 480
RRTESAVKTPSP SPEKKNEVLD+PPTEKV LFSGSV SNF P NPTVSLGISNDQSGG
Sbjct: 421 RRTESAVKTPSPLLSPEKKNEVLDLPPTEKVGLFSGSVASNFSPSNPTVSLGISNDQSGG 480
Query: 481 ALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQLTQATRPMRRLYIENLPHSASEKAIIDCL 540
A FSSAMGKSLS VSSNNIAMKTKVS DL+QLTQATRPMRRLYIENLPHSASEKAIIDCL
Sbjct: 481 AFFSSAMGKSLSVVSSNNIAMKTKVSFDLVQLTQATRPMRRLYIENLPHSASEKAIIDCL 540
Query: 541 NGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEFLTPEDASAALSFDGSDFSGSILKIRR 600
NGFL SSGVNHIEGTQPCISCIIHKDR QALVEFLTPEDASAALSFDGSDFSGSILKIRR
Sbjct: 541 NGFLMSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPEDASAALSFDGSDFSGSILKIRR 600
Query: 601 PKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVAGFQTVAIFMQTGDLDKSVPVVNEISD 660
PKDYIE V TGDLDKS+PVVN+ISD
Sbjct: 601 PKDYIETV------------------------------------TGDLDKSMPVVNKISD 660
Query: 661 VVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLKAYHFEMNDDINEPCAFLEYVDQSVVS 720
VVEDSPNKIIVAGISNR+SSEMLRDIVTAFG LKAYHFEMNDD+N+PCAFLEY+D+SVVS
Sbjct: 661 VVEDSPNKIIVAGISNRLSSEMLRDIVTAFGRLKAYHFEMNDDLNQPCAFLEYIDESVVS 720
Query: 721 KACAGLNGMKIGGEVLKVFPAVPFASTERNGCQPCYGIPEHVKPLLQQPSVVLKVNNVCY 780
KACAGLNGMKIGG+VLKVFPAVPF STER GCQPCYGIPEHVKPLLQQPSVVLK+NNV
Sbjct: 721 KACAGLNGMKIGGQVLKVFPAVPFPSTERTGCQPCYGIPEHVKPLLQQPSVVLKINNV-- 780
Query: 781 VQSSDWAFTFWTQFNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNGCVSAE 840
FNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNG V+ E
Sbjct: 781 -------------FNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNGGVNTE 840
Query: 841 EEYKKISDDVTDVEIKHEIQENSTMVISRNNNDLEDNYANLDNCPNDTNQKQVNSPSNGR 900
EE+KKIS D++DVEIKHEIQENS VI RN+NDLEDN ANLD+CP+DTNQKQ N NGR
Sbjct: 841 EEHKKIS-DISDVEIKHEIQENSKTVILRNSNDLEDNNANLDSCPSDTNQKQANCSGNGR 900
Query: 901 RQDEGMEDKFCQIGNDDATCFEFVARENASERIPQGLSDQRSSPENELQNAKVAEIIETD 960
QDE +EDK CQ+GN DATCFE A ENASERI Q LS+QRSSPEN+ QNAKV EIIETD
Sbjct: 901 HQDEAVEDKLCQMGNTDATCFEVAACENASERIRQVLSEQRSSPENDFQNAKVTEIIETD 960
Query: 961 ETGSDKKSVCLD-SPMVVDDNEKKALNGLDPMVRTGSDASDKSEKKDPNNNLESLFVLGS 973
ETG DKK VC++ S M+V DNEKK+LNGLDP+VR S+A +KSEKKDP+NN ESLFVLGS
Sbjct: 961 ETGLDKKLVCVEASSMMVADNEKKSLNGLDPVVRIASNAVEKSEKKDPDNNQESLFVLGS 1000
BLAST of Cla97C06G116850 vs. NCBI nr
Match:
XP_008460661.1 (PREDICTED: splicing factor U2af large subunit B isoform X1 [Cucumis melo] >XP_008460662.1 PREDICTED: splicing factor U2af large subunit B isoform X1 [Cucumis melo] >XP_008460664.1 PREDICTED: splicing factor U2af large subunit B isoform X1 [Cucumis melo])
HSP 1 Score: 1432.2 bits (3706), Expect = 0.0e+00
Identity = 796/1079 (73.77%), Postives = 849/1079 (78.68%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+THSCSKQYSRRSKKQT+SNS+DE+AARTRP SFEDIMLRRK KGS+ATVEV T
Sbjct: 1 MSTHSCSKQYSRRSKKQTRSNSDDETAARTRPFSFEDIMLRRKTKGSSATVEVDVT---- 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSI-EESAKDSSRRKKEETLLKDNMVVRS 120
STDNRASER+ RHSKGSSLDVQN+S+ EESAKDSSRRKKEET+LK+N+VVR+
Sbjct: 61 --------STDNRASERHFRHSKGSSLDVQNVSLEEESAKDSSRRKKEETVLKNNIVVRN 120
Query: 121 DRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAG 180
DRNNYESGLSLMSKLK+DRN KD+ EKYGQENLGWGKNDQS RIDIETET KRHSRDTA
Sbjct: 121 DRNNYESGLSLMSKLKHDRNEKDEREKYGQENLGWGKNDQSCRIDIETETAKRHSRDTAF 180
Query: 181 KDRREDHGRGKFERE--------------------------------------------- 240
KDRR+DHGRG+FERE
Sbjct: 181 KDRRQDHGRGEFERESKRKSQNGDDDRNRDSKRKSQNCVDESNKDGRRKSQNGDDDRNRD 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 SKRKSQNGDDDRSRDSKRKSQNGDDDRNRDSKRKSQNGDDERNRDGKRKSQNGDDDRNRD 300
Query: 301 NKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHYEDSRLKRRRKRSRD 360
+KRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRE+KEA VSLTS Y+DSRLKR RKRS D
Sbjct: 301 SKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENREKKEAIVSLTSRYQDSRLKRTRKRSSD 360
Query: 361 RESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDRTGDFTNTSNSQYRR 420
RESKHRRSVSLSPR HKHSTKLARQKELPLDSHVKKSGRWRSDS+RTGDFTNTSNSQYRR
Sbjct: 361 RESKHRRSVSLSPRSHKHSTKLARQKELPLDSHVKKSGRWRSDSERTGDFTNTSNSQYRR 420
Query: 421 HSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKVKLFSGSVTSNFQPP 480
HSGSTSGLGGYSPRKRRTESAVKTPSP SPEKKNEVLD+PPTEKV LFSGSV SNF P
Sbjct: 421 HSGSTSGLGGYSPRKRRTESAVKTPSPLLSPEKKNEVLDLPPTEKVGLFSGSVASNFSPS 480
Query: 481 NPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQLTQATRPMRRLYIE 540
NPTVSLGISNDQSGGA FSSAMGKSLS VSSNNIAMKTKVS DL+QLTQATRPMRRLYIE
Sbjct: 481 NPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMKTKVSFDLVQLTQATRPMRRLYIE 540
Query: 541 NLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEFLTPEDASAALS 600
NLPHSASEKAIIDCLNGFL SSGVNHIEGTQPCISCIIHKDR QALVEFLTPEDASAALS
Sbjct: 541 NLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPEDASAALS 600
Query: 601 FDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVAGFQTVAIFMQT 660
FDGSDFSGSILKIRRPKDYIE V T
Sbjct: 601 FDGSDFSGSILKIRRPKDYIETV------------------------------------T 660
Query: 661 GDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLKAYHFEMNDDIN 720
GDLDKS+PVVN+ISDVVEDSPNKIIVAGISNR+SSEMLRDIVTAFG LKAYHFEMNDD+N
Sbjct: 661 GDLDKSMPVVNKISDVVEDSPNKIIVAGISNRLSSEMLRDIVTAFGRLKAYHFEMNDDLN 720
Query: 721 EPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNGCQPCYGIPEHVKPL 780
+PCAFLEY+D+SVVSKACAGLNGMKIGG+VLKVFPAVPF STER GCQPCYGIPEHVKPL
Sbjct: 721 QPCAFLEYIDESVVSKACAGLNGMKIGGQVLKVFPAVPFPSTERTGCQPCYGIPEHVKPL 780
Query: 781 LQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVLEDIRFECARFGTVK 840
LQQPSVVLK+NNV FNADVLPVLSESDIDEVLEDIRFECARFGTVK
Sbjct: 781 LQQPSVVLKINNV---------------FNADVLPVLSESDIDEVLEDIRFECARFGTVK 840
Query: 841 SMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRNNNDLEDNYANLDNCP 900
SMNFVKPCNG V+ EEE+KKIS D++DVEIKHEIQENS VI RN+NDLEDN ANLD+CP
Sbjct: 841 SMNFVKPCNGGVNTEEEHKKIS-DISDVEIKHEIQENSKTVILRNSNDLEDNNANLDSCP 900
Query: 901 NDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENASERIPQGLSDQRSSPE 960
+DTNQKQ N NGR QDE +EDK CQ+GN DATCFE A ENASERI Q LS+QRSSPE
Sbjct: 901 SDTNQKQANCSGNGRHQDEAVEDKLCQMGNTDATCFEVAACENASERIRQVLSEQRSSPE 960
Query: 961 NELQNAKVAEIIETDETGSDKKSVCLD-SPMVVDDNEKKALNGLDPMVRTGSDASDKSEK 973
N+ QNAKV EIIETDETG DKK VC++ S M+V DNEKK+LNGLDP+VR S+A +KSEK
Sbjct: 961 NDFQNAKVTEIIETDETGLDKKLVCVEASSMMVADNEKKSLNGLDPVVRIASNAVEKSEK 1015
BLAST of Cla97C06G116850 vs. NCBI nr
Match:
KAA0050717.1 (splicing factor U2af large subunit B isoform X1 [Cucumis melo var. makuwa] >TYK01450.1 splicing factor U2af large subunit B isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1426.4 bits (3691), Expect = 0.0e+00
Identity = 796/1094 (72.76%), Postives = 849/1094 (77.61%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+THSCSKQYSRRSKKQT+SNS+DE+AARTRP SFEDIMLRRK KGS+ATVEV T
Sbjct: 1 MSTHSCSKQYSRRSKKQTRSNSDDETAARTRPFSFEDIMLRRKTKGSSATVEVDVT---- 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSI-EESAKDSSRRKKEETLLKDNMVVRS 120
STDNRASER+ RHSKGSSLDVQN+S+ EESAKDSSRRKKEET+LK+N+VVR+
Sbjct: 61 --------STDNRASERHFRHSKGSSLDVQNVSLEEESAKDSSRRKKEETVLKNNIVVRN 120
Query: 121 DRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAG 180
DRNNYESGLSLMSKLK+DRN KD+ EKYGQENLGWGKNDQS RIDIETET KRHSRDTA
Sbjct: 121 DRNNYESGLSLMSKLKHDRNEKDEREKYGQENLGWGKNDQSCRIDIETETAKRHSRDTAF 180
Query: 181 KDRREDHGRGKFERE--------------------------------------------- 240
KDRR+DHGRG+FERE
Sbjct: 181 KDRRQDHGRGEFERESKRKSQNGDDDRNRDSKRKSQNCVDESNKDGRRKSQNGDDDRNRD 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 SKRKSQNGDDDRNRDSKRKSQNGDDDRSRDSKRKSQNGDDDRNRDSKRKSQNGDDERNRD 300
Query: 301 ---------------NKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSH 360
+KRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRE+KEA VSLTS
Sbjct: 301 GKRKSQNGDDDRNRDSKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENREKKEAIVSLTSR 360
Query: 361 YEDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSD 420
Y+DSRLKR RKRS DRESKHRRSVSLSPR HKHSTKLARQKELPLDSHVKKSGRWRSDS+
Sbjct: 361 YQDSRLKRTRKRSSDRESKHRRSVSLSPRSHKHSTKLARQKELPLDSHVKKSGRWRSDSE 420
Query: 421 RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEK 480
RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSP SPEKKNEVLD+PPTEK
Sbjct: 421 RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPLLSPEKKNEVLDLPPTEK 480
Query: 481 VKLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLI 540
V LFSGSV SNF P NPTVSLGISNDQSGGA FSSAMGKSLS VSSNNIAMKTKVS DL+
Sbjct: 481 VGLFSGSVASNFSPSNPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMKTKVSFDLV 540
Query: 541 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQA 600
QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFL SSGVNHIEGTQPCISCIIHKDR QA
Sbjct: 541 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQA 600
Query: 601 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGY 660
LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIE V
Sbjct: 601 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIETV---------------------- 660
Query: 661 YHVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAF 720
TGDLDKS+PVVN+ISDVVEDSPNKIIVAGISNR+SSEMLRDIVTAF
Sbjct: 661 --------------TGDLDKSMPVVNKISDVVEDSPNKIIVAGISNRLSSEMLRDIVTAF 720
Query: 721 GCLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERN 780
G LKAYHFEMNDD+N+PCAFLEY+D+SVVSKACAGLNGMKIGG+VLKVFPAVPF STER
Sbjct: 721 GRLKAYHFEMNDDLNQPCAFLEYIDESVVSKACAGLNGMKIGGQVLKVFPAVPFPSTERT 780
Query: 781 GCQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEV 840
GCQPCYGIPEHVKPLLQQPSVVLK+NNV FNADVLPVLSESDIDEV
Sbjct: 781 GCQPCYGIPEHVKPLLQQPSVVLKINNV---------------FNADVLPVLSESDIDEV 840
Query: 841 LEDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRN 900
LEDIRFECARFGTVKSMNFVKPCNG V+ EEE+KKIS D++DVEIKHEIQENS VI RN
Sbjct: 841 LEDIRFECARFGTVKSMNFVKPCNGGVNTEEEHKKIS-DISDVEIKHEIQENSKTVILRN 900
Query: 901 NNDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENAS 960
+NDLEDN ANLD+CP+DTNQKQ N NGR QDE +EDK CQ+GN DATCFE A ENAS
Sbjct: 901 SNDLEDNNANLDSCPSDTNQKQANCSGNGRHQDEAVEDKLCQMGNTDATCFEVAACENAS 960
Query: 961 ERIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCLD-SPMVVDDNEKKALNGLD 973
ERI Q LS+QRSSPEN+ QNAKV EIIETDETG DKK VC++ S M+V DNEKK+LNGLD
Sbjct: 961 ERIRQVLSEQRSSPENDFQNAKVTEIIETDETGLDKKLVCVEASSMMVADNEKKSLNGLD 1020
BLAST of Cla97C06G116850 vs. NCBI nr
Match:
XP_022959019.1 (splicing factor U2af large subunit B-like [Cucurbita moschata])
HSP 1 Score: 1383.6 bits (3580), Expect = 0.0e+00
Identity = 756/972 (77.78%), Postives = 810/972 (83.33%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+++S SK YSRRSKKQT SNSNDESAARTRPLSFEDIMLRRKNKGSA TVEVG TGSHS
Sbjct: 1 MSSYSFSKHYSRRSKKQTLSNSNDESAARTRPLSFEDIMLRRKNKGSADTVEVGVTGSHS 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSIEESAKDSSRRKKEETLLKDNMVVRSD 120
RRESIDK STDN ASER+ RH KG+SLDVQNLS+EES KDSSRRKKEETLLKDNM VRSD
Sbjct: 61 RRESIDKLSTDNCASERHFRHGKGASLDVQNLSLEESGKDSSRRKKEETLLKDNMEVRSD 120
Query: 121 RNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAGK 180
RNNY+S L+LM KLKYD NG DK +KYGQEN+G GK +QSSR+DIE ETGKRHSRD+ K
Sbjct: 121 RNNYDSELTLMGKLKYDANGNDKKQKYGQENVGRGKKNQSSRVDIEKETGKRHSRDS--K 180
Query: 181 DRREDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHY 240
+RED GRG FER KRK QNGDD+ NRDKY AKRHDHGKHHD ENRERKEAK SLTS+Y
Sbjct: 181 AKREDLGRGNFERGGKRKDQNGDDEGNRDKYAAKRHDHGKHHDPENRERKEAKASLTSNY 240
Query: 241 EDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDR 300
EDSRL+RRRKRS+DRESKHRRSVSLSPRPHKHS+KL RQKELPLDSHVKKSGRWRSDSDR
Sbjct: 241 EDSRLQRRRKRSQDRESKHRRSVSLSPRPHKHSSKLVRQKELPLDSHVKKSGRWRSDSDR 300
Query: 301 TGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKV 360
TGD TN+SNSQYRRH GSTSGLGGYSPRKRRTESA+KTPSP +SPEKK+E LDVPPTEK+
Sbjct: 301 TGDLTNSSNSQYRRHFGSTSGLGGYSPRKRRTESAIKTPSPVQSPEKKDEGLDVPPTEKI 360
Query: 361 KLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
LFS S+ SNFQP N TVS GI N QSGGA+FSS +GKSL+GVSSNNI MKT VSLDLIQ
Sbjct: 361 GLFSSSINSNFQPSNATVSSGIINVQSGGAIFSSVIGKSLTGVSSNNIEMKTNVSLDLIQ 420
Query: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQAL 480
LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHI+GT PCISCIIHKDR QAL
Sbjct: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIKGTLPCISCIIHKDRGQAL 480
Query: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYY 540
VEFLTPEDASAALSFDGSDFSGSILKIRRPKDY+EIV
Sbjct: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYVEIV----------------------- 540
Query: 541 HVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFG 600
TG LDKSV VVN+I D VEDSPNKI +AGISNRISSEMLRDIVTAFG
Sbjct: 541 -------------TGGLDKSVAVVNKIIDTVEDSPNKIFIAGISNRISSEMLRDIVTAFG 600
Query: 601 CLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNG 660
LKA+HFEMNDD+NE CAFLEYVDQS+VSKACAGLNGMKIGGEVLKVFPAVPF S ERN
Sbjct: 601 PLKAFHFEMNDDLNERCAFLEYVDQSIVSKACAGLNGMKIGGEVLKVFPAVPFTSLERNE 660
Query: 661 CQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVL 720
CQP YGIPEHVKPLLQQP+VVLKVNNV FNADVLPVLSE+DIDEVL
Sbjct: 661 CQPWYGIPEHVKPLLQQPTVVLKVNNV---------------FNADVLPVLSEADIDEVL 720
Query: 721 EDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRNN 780
EDIR ECARFGTVKSMNFVKPCNGC SAEE+YK IS D+TDVEIKHEIQEN TM ISRN
Sbjct: 721 EDIRVECARFGTVKSMNFVKPCNGCFSAEEDYKNIS-DITDVEIKHEIQENCTMAISRNG 780
Query: 781 NDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENASE 840
ND+EDN NLDNCPNDTNQ+Q N P NGR QDE +E K C++G DDAT FE VA ENASE
Sbjct: 781 NDVEDNNVNLDNCPNDTNQRQGNCPGNGRHQDE-VEVKLCRMGQDDATRFEIVACENASE 840
Query: 841 RIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCLDSPMVVDDNEKKALNGLDPM 900
RIP+GLS+Q+SSP N+ Q+AKVAE IET+E DKKSVC+D M
Sbjct: 841 RIPRGLSEQQSSPGNQHQDAKVAETIETNEISPDKKSVCIDD---------------SAM 900
Query: 901 VRTGSDASDKSEKKDPNNNLESLFVLGSVFVEFGRMEASCMAAHSLHGRIYDGQEISIEY 960
VRT D S+KSEK DP NNL SLFVLGSVFVEFGR EASCMAAHSLHGRIYDGQEISIEY
Sbjct: 901 VRTDFDTSEKSEKDDPRNNLASLFVLGSVFVEFGRTEASCMAAHSLHGRIYDGQEISIEY 902
Query: 961 IPYDVYRKRFPK 973
IP+D+YRKRFPK
Sbjct: 961 IPHDLYRKRFPK 902
BLAST of Cla97C06G116850 vs. ExPASy Swiss-Prot
Match:
Q24562 (Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster OX=7227 GN=U2af50 PE=1 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 3.4e-29
Identity = 88/322 (27.33%), Postives = 153/322 (47.52%), Query Frame = 0
Query: 425 TRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEFL 484
TR RRLY+ N+P +E+ +++ N + G+ G+ P ++C I+ D+ A +EF
Sbjct: 89 TRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQINLDKNFAFLEFR 148
Query: 485 TPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVAG 544
+ ++ + A++FDG + G LKIRRP DY
Sbjct: 149 SIDETTQAMAFDGINLKGQSLKIRRPHDY------------------------------- 208
Query: 545 FQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLKA 604
Q + T + +V IS VV DSP+KI + G+ N ++ + +++++ +FG L+A
Sbjct: 209 -QPMPGITDTPAIKPAVVSSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRA 268
Query: 605 YHF--EMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNGCQ 664
++ + +++ AF EYVD S+ ++ AGLNGM++G + L V A A +N
Sbjct: 269 FNLVKDAATGLSKGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAAN 328
Query: 665 PCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVLED 724
+ +LQ P ++NV D L E + +++LED
Sbjct: 329 TTQSV------MLQVPG----LSNVVTSGPPTEVLCLLNMVTPDEL--RDEEEYEDILED 365
Query: 725 IRFECARFGTVKSMNFVKPCNG 745
I+ EC ++G V+S+ +P G
Sbjct: 389 IKEECTKYGVVRSVEIPRPIEG 365
BLAST of Cla97C06G116850 vs. ExPASy Swiss-Prot
Match:
P90978 (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans OX=6239 GN=uaf-1 PE=2 SV=2)
HSP 1 Score: 120.6 bits (301), Expect = 1.0e-25
Identity = 133/524 (25.38%), Postives = 221/524 (42.18%), Query Frame = 0
Query: 224 LENRERKEAKVSLTSHYEDS-RLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKEL 283
LEN E ++ +D+ R KR+R RSRDR+++ RRS S
Sbjct: 37 LENEENLKSSTGGGGGEDDNDRKKRKRSRSRDRDTR-RRSRS------------------ 96
Query: 284 PLDSHVKKSGRWRSDSDRTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKT---P 343
D ++ G D DR S S+ RR G G PR+R + ++ P
Sbjct: 97 -RDRGERRGGGGGGDRDR-------SRSRERRRGGG----GRDEPRRRGGDDEARSRREP 156
Query: 344 SPARSPE-KKNEVLDVPPTEKVKLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGK 403
P + E KK DVPPT F+ P + N Q+ G + ++
Sbjct: 157 EPQKPREPKKYRFWDVPPT------------GFETTTP---MEYKNMQAAGQVPRGSVQS 216
Query: 404 SLSGVSSNNIAMKTKVSLDLIQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGV 463
++ V + T RRLY+ N+P +E+A++D N + G+
Sbjct: 217 AVPVVGPS-----------------VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGL 276
Query: 464 NHIEGTQPCISCIIHKDRAQALVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVY 523
G P + C I+ D+ A +EF + ++ +A ++FDG +F G LK+RRP+DY
Sbjct: 277 AQAPG-NPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY----- 336
Query: 524 IVPVAQDLDEIVLLSEVYCGYYHVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKI 583
T D++ +PV S +V DS NKI
Sbjct: 337 ------------------------------QPSQNTFDMNSRMPV----STIVVDSANKI 396
Query: 584 IVAGISNRISSEMLRDIVTAFGCLKAYHFEMNDDIN-EPCAFLEYVDQSVVSKACAGLNG 643
+ G+ N ++ + +++++ +FG LKA+ ++ N + AF EY+D ++ +A AGLNG
Sbjct: 397 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 442
Query: 644 MKIGGEVLKVFPAVPFASTERNGCQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAF 703
M++G + L V A C H L S + ++ +
Sbjct: 457 MQLGDKQLVVQLA-------------CANQQRHNTNLPNSASAIAGIDLSQGAGRATEIL 442
Query: 704 TFWTQFNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKP 742
D L ++ + +E+LED+R EC+++G V+S+ +P
Sbjct: 517 CLMNMVTEDELK--ADDEYEEILEDVRDECSKYGIVRSLEIPRP 442
BLAST of Cla97C06G116850 vs. ExPASy Swiss-Prot
Match:
P26368 (Splicing factor U2AF 65 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF2 PE=1 SV=4)
HSP 1 Score: 120.2 bits (300), Expect = 1.3e-25
Identity = 134/510 (26.27%), Postives = 229/510 (44.90%), Query Frame = 0
Query: 241 EDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDR 300
E R K+ RD+E++HR+ R H S R++ R RS R
Sbjct: 6 EFERQLNENKQERDKENRHRK------RSHSRSRSRDRKR------------RSRSRDRR 65
Query: 301 TGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKV 360
D + S + RR T G K +++P + +K + DVPP
Sbjct: 66 NRDQRSASRDRRRRSKPLTRG------AKEEHGGLIRSPRHEKK-KKVRKYWDVPP---- 125
Query: 361 KLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
F+ P + Q+ G + ++A+ L ++ + +A+ T + ++
Sbjct: 126 --------PGFEHITP---MQYKAMQAAGQIPATAL---LPTMTPDGLAV-TPTPVPVVG 185
Query: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQAL 480
+Q TR RRLY+ N+P +E+A++D N + G+ G P ++ I++D+ A
Sbjct: 186 -SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPG-NPVLAVQINQDKNFAF 245
Query: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYY 540
+EF + ++ + A++FDG F G LKIRRP DY + +SE
Sbjct: 246 LEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-------------QPLPGMSE------ 305
Query: 541 HVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFG 600
+ SV V +S VV DS +K+ + G+ N ++ + +++++T+FG
Sbjct: 306 -----------------NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFG 365
Query: 601 CLKAYHF--EMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTER 660
LKA++ + +++ AF EYVD +V +A AGLNGM++G + L V A A
Sbjct: 366 PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNAT 423
Query: 661 NGCQPCYGIPEHVKPLLQQPSVVLKVNNV--CYVQSSDWAFTFWTQFNADVLP--VLSES 720
P + Q V L+V + VQ N VLP +L +
Sbjct: 426 LVSPP---------STINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNM-VLPEELLDDE 423
Query: 721 DIDEVLEDIRFECARFGTVKSMNFVKPCNG 745
+ +E++ED+R EC+++G VKS+ +P +G
Sbjct: 486 EYEEIVEDVRDECSKYGLVKSIEIPRPVDG 423
BLAST of Cla97C06G116850 vs. ExPASy Swiss-Prot
Match:
P26369 (Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3)
HSP 1 Score: 119.8 bits (299), Expect = 1.7e-25
Identity = 134/510 (26.27%), Postives = 229/510 (44.90%), Query Frame = 0
Query: 241 EDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDR 300
E R K+ RD+E++HR+ R H S R++ R RS R
Sbjct: 6 EFERQLNENKQERDKENRHRK------RSHSRSRSRDRKR------------RSRSRDRR 65
Query: 301 TGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKV 360
D + S + RR T G K +++P + +K + DVPP
Sbjct: 66 NRDQRSASRDRRRRSKPLTRG------AKEEHGGLIRSPRHEKK-KKVRKYWDVPP---- 125
Query: 361 KLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
F+ P + Q+ G + ++A+ L ++ + +A+ T + ++
Sbjct: 126 --------PGFEHITP---MQYKAMQAAGQIPATAL---LPTMTPDGLAV-TPTPVPVVG 185
Query: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQAL 480
+Q TR RRLY+ N+P +E+A++D N + G+ G P ++ I++D+ A
Sbjct: 186 -SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPG-NPVLAVQINQDKNFAF 245
Query: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYY 540
+EF + ++ + A++FDG F G LKIRRP DY + +SE
Sbjct: 246 LEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY-------------QPLPGMSE------ 305
Query: 541 HVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFG 600
+ SV V +S VV DS +K+ + G+ N ++ + +++++T+FG
Sbjct: 306 -----------------NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFG 365
Query: 601 CLKAYHF--EMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTER 660
LKA++ + +++ AF EYVD +V +A AGLNGM++G + L V A A
Sbjct: 366 PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNAT 423
Query: 661 NGCQPCYGIPEHVKPLLQQPSVVLKVNNV--CYVQSSDWAFTFWTQFNADVLP--VLSES 720
P + Q V L+V + VQ N VLP +L +
Sbjct: 426 LVSLP---------STINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNM-VLPEELLDDE 423
Query: 721 DIDEVLEDIRFECARFGTVKSMNFVKPCNG 745
+ +E++ED+R EC+++G VKS+ +P +G
Sbjct: 486 EYEEIVEDVRDECSKYGLVKSIEIPRPVDG 423
BLAST of Cla97C06G116850 vs. ExPASy Swiss-Prot
Match:
P90727 (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis briggsae OX=6238 GN=uaf-1 PE=3 SV=2)
HSP 1 Score: 118.2 bits (295), Expect = 5.0e-25
Identity = 126/503 (25.05%), Postives = 206/503 (40.95%), Query Frame = 0
Query: 241 EDSRLKRRRKRSRDRESKHR-RSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSD 300
++ R KR+R RSRDR + R RS S R S R+++ D R+ D
Sbjct: 52 DEDRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRERRRDRSRD---------RNRDD 111
Query: 301 RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEK 360
R G G R+R + K P KK DVPPT
Sbjct: 112 RRG--------------------GRDDDRRREPQEPAKPREP-----KKYRFWDVPPT-- 171
Query: 361 VKLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLI 420
F+ P + N Q+ GA+ ++ ++ V +
Sbjct: 172 ----------GFENITP---MEYKNMQASGAVPRGSVQSAVPVVGPS------------- 231
Query: 421 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQA 480
T RRLY+ N+P +E+A++D N + + G P + C I+ D+ A
Sbjct: 232 ----VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPG-NPILLCQINLDKNFA 291
Query: 481 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGY 540
+EF + ++ +A ++FDG +F G LK+RRP+DY
Sbjct: 292 FIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDY-------------------------- 351
Query: 541 YHVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAF 600
T D++ +PV S +V DS NKI + G+ N ++ + +++++ +F
Sbjct: 352 ---------QPSQNTFDMNARMPV----SSIVVDSANKIFIGGLPNYLTEDQVKELLCSF 411
Query: 601 GCLKAYHFEMNDDIN-EPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTER 660
G LKA+ ++ N + AF EY+D ++ +A AGLNGM++G + L V A
Sbjct: 412 GPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLA-------- 433
Query: 661 NGCQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDE 720
C H L S + ++ + D L S+ D +E
Sbjct: 472 -----CANQTRHNTHLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL--RSDEDYEE 433
Query: 721 VLEDIRFECARFGTVKSMNFVKP 742
+LED+R EC+++G V+S+ +P
Sbjct: 532 ILEDVREECSKYGIVRSLEIPRP 433
BLAST of Cla97C06G116850 vs. ExPASy TrEMBL
Match:
A0A1S3CCY4 (splicing factor U2af large subunit B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499435 PE=4 SV=1)
HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 796/1064 (74.81%), Postives = 849/1064 (79.79%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+THSCSKQYSRRSKKQT+SNS+DE+AARTRP SFEDIMLRRK KGS+ATVEV T
Sbjct: 1 MSTHSCSKQYSRRSKKQTRSNSDDETAARTRPFSFEDIMLRRKTKGSSATVEVDVT---- 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSI-EESAKDSSRRKKEETLLKDNMVVRS 120
STDNRASER+ RHSKGSSLDVQN+S+ EESAKDSSRRKKEET+LK+N+VVR+
Sbjct: 61 --------STDNRASERHFRHSKGSSLDVQNVSLEEESAKDSSRRKKEETVLKNNIVVRN 120
Query: 121 DRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAG 180
DRNNYESGLSLMSKLK+DRN KD+ EKYGQENLGWGKNDQS RIDIETET KRHSRDTA
Sbjct: 121 DRNNYESGLSLMSKLKHDRNEKDEREKYGQENLGWGKNDQSCRIDIETETAKRHSRDTAF 180
Query: 181 KDRREDHGRGKFERE--------------------------------------------- 240
KDRR+DHGRG+FERE
Sbjct: 181 KDRRQDHGRGEFERESKRKSQNGDDDRNRDSKRKSQNGDDDRNRDSKRKSQNGDDDRSRD 240
Query: 241 ---------------------------------------------NKRKSQNGDDDRNRD 300
+KRKSQNGDDDRNRD
Sbjct: 241 SKRKSQNGDDDRNRDSKRKSQNGDDERNRDGKRKSQNGDDDRNRDSKRKSQNGDDDRNRD 300
Query: 301 KYIAKRHDHGKHHDLENRERKEAKVSLTSHYEDSRLKRRRKRSRDRESKHRRSVSLSPRP 360
KYIAKRHDHGKHHDLENRE+KEA VSLTS Y+DSRLKR RKRS DRESKHRRSVSLSPR
Sbjct: 301 KYIAKRHDHGKHHDLENREKKEAIVSLTSRYQDSRLKRTRKRSSDRESKHRRSVSLSPRS 360
Query: 361 HKHSTKLARQKELPLDSHVKKSGRWRSDSDRTGDFTNTSNSQYRRHSGSTSGLGGYSPRK 420
HKHSTKLARQKELPLDSHVKKSGRWRSDS+RTGDFTNTSNSQYRRHSGSTSGLGGYSPRK
Sbjct: 361 HKHSTKLARQKELPLDSHVKKSGRWRSDSERTGDFTNTSNSQYRRHSGSTSGLGGYSPRK 420
Query: 421 RRTESAVKTPSPARSPEKKNEVLDVPPTEKVKLFSGSVTSNFQPPNPTVSLGISNDQSGG 480
RRTESAVKTPSP SPEKKNEVLD+PPTEKV LFSGSV SNF P NPTVSLGISNDQSGG
Sbjct: 421 RRTESAVKTPSPLLSPEKKNEVLDLPPTEKVGLFSGSVASNFSPSNPTVSLGISNDQSGG 480
Query: 481 ALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQLTQATRPMRRLYIENLPHSASEKAIIDCL 540
A FSSAMGKSLS VSSNNIAMKTKVS DL+QLTQATRPMRRLYIENLPHSASEKAIIDCL
Sbjct: 481 AFFSSAMGKSLSVVSSNNIAMKTKVSFDLVQLTQATRPMRRLYIENLPHSASEKAIIDCL 540
Query: 541 NGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEFLTPEDASAALSFDGSDFSGSILKIRR 600
NGFL SSGVNHIEGTQPCISCIIHKDR QALVEFLTPEDASAALSFDGSDFSGSILKIRR
Sbjct: 541 NGFLMSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPEDASAALSFDGSDFSGSILKIRR 600
Query: 601 PKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVAGFQTVAIFMQTGDLDKSVPVVNEISD 660
PKDYIE V TGDLDKS+PVVN+ISD
Sbjct: 601 PKDYIETV------------------------------------TGDLDKSMPVVNKISD 660
Query: 661 VVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLKAYHFEMNDDINEPCAFLEYVDQSVVS 720
VVEDSPNKIIVAGISNR+SSEMLRDIVTAFG LKAYHFEMNDD+N+PCAFLEY+D+SVVS
Sbjct: 661 VVEDSPNKIIVAGISNRLSSEMLRDIVTAFGRLKAYHFEMNDDLNQPCAFLEYIDESVVS 720
Query: 721 KACAGLNGMKIGGEVLKVFPAVPFASTERNGCQPCYGIPEHVKPLLQQPSVVLKVNNVCY 780
KACAGLNGMKIGG+VLKVFPAVPF STER GCQPCYGIPEHVKPLLQQPSVVLK+NNV
Sbjct: 721 KACAGLNGMKIGGQVLKVFPAVPFPSTERTGCQPCYGIPEHVKPLLQQPSVVLKINNV-- 780
Query: 781 VQSSDWAFTFWTQFNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNGCVSAE 840
FNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNG V+ E
Sbjct: 781 -------------FNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNGGVNTE 840
Query: 841 EEYKKISDDVTDVEIKHEIQENSTMVISRNNNDLEDNYANLDNCPNDTNQKQVNSPSNGR 900
EE+KKIS D++DVEIKHEIQENS VI RN+NDLEDN ANLD+CP+DTNQKQ N NGR
Sbjct: 841 EEHKKIS-DISDVEIKHEIQENSKTVILRNSNDLEDNNANLDSCPSDTNQKQANCSGNGR 900
Query: 901 RQDEGMEDKFCQIGNDDATCFEFVARENASERIPQGLSDQRSSPENELQNAKVAEIIETD 960
QDE +EDK CQ+GN DATCFE A ENASERI Q LS+QRSSPEN+ QNAKV EIIETD
Sbjct: 901 HQDEAVEDKLCQMGNTDATCFEVAACENASERIRQVLSEQRSSPENDFQNAKVTEIIETD 960
Query: 961 ETGSDKKSVCLD-SPMVVDDNEKKALNGLDPMVRTGSDASDKSEKKDPNNNLESLFVLGS 973
ETG DKK VC++ S M+V DNEKK+LNGLDP+VR S+A +KSEKKDP+NN ESLFVLGS
Sbjct: 961 ETGLDKKLVCVEASSMMVADNEKKSLNGLDPVVRIASNAVEKSEKKDPDNNQESLFVLGS 1000
BLAST of Cla97C06G116850 vs. ExPASy TrEMBL
Match:
A0A1S3CD15 (splicing factor U2af large subunit B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499435 PE=4 SV=1)
HSP 1 Score: 1432.2 bits (3706), Expect = 0.0e+00
Identity = 796/1079 (73.77%), Postives = 849/1079 (78.68%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+THSCSKQYSRRSKKQT+SNS+DE+AARTRP SFEDIMLRRK KGS+ATVEV T
Sbjct: 1 MSTHSCSKQYSRRSKKQTRSNSDDETAARTRPFSFEDIMLRRKTKGSSATVEVDVT---- 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSI-EESAKDSSRRKKEETLLKDNMVVRS 120
STDNRASER+ RHSKGSSLDVQN+S+ EESAKDSSRRKKEET+LK+N+VVR+
Sbjct: 61 --------STDNRASERHFRHSKGSSLDVQNVSLEEESAKDSSRRKKEETVLKNNIVVRN 120
Query: 121 DRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAG 180
DRNNYESGLSLMSKLK+DRN KD+ EKYGQENLGWGKNDQS RIDIETET KRHSRDTA
Sbjct: 121 DRNNYESGLSLMSKLKHDRNEKDEREKYGQENLGWGKNDQSCRIDIETETAKRHSRDTAF 180
Query: 181 KDRREDHGRGKFERE--------------------------------------------- 240
KDRR+DHGRG+FERE
Sbjct: 181 KDRRQDHGRGEFERESKRKSQNGDDDRNRDSKRKSQNCVDESNKDGRRKSQNGDDDRNRD 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 SKRKSQNGDDDRSRDSKRKSQNGDDDRNRDSKRKSQNGDDERNRDGKRKSQNGDDDRNRD 300
Query: 301 NKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHYEDSRLKRRRKRSRD 360
+KRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRE+KEA VSLTS Y+DSRLKR RKRS D
Sbjct: 301 SKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENREKKEAIVSLTSRYQDSRLKRTRKRSSD 360
Query: 361 RESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDRTGDFTNTSNSQYRR 420
RESKHRRSVSLSPR HKHSTKLARQKELPLDSHVKKSGRWRSDS+RTGDFTNTSNSQYRR
Sbjct: 361 RESKHRRSVSLSPRSHKHSTKLARQKELPLDSHVKKSGRWRSDSERTGDFTNTSNSQYRR 420
Query: 421 HSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKVKLFSGSVTSNFQPP 480
HSGSTSGLGGYSPRKRRTESAVKTPSP SPEKKNEVLD+PPTEKV LFSGSV SNF P
Sbjct: 421 HSGSTSGLGGYSPRKRRTESAVKTPSPLLSPEKKNEVLDLPPTEKVGLFSGSVASNFSPS 480
Query: 481 NPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQLTQATRPMRRLYIE 540
NPTVSLGISNDQSGGA FSSAMGKSLS VSSNNIAMKTKVS DL+QLTQATRPMRRLYIE
Sbjct: 481 NPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMKTKVSFDLVQLTQATRPMRRLYIE 540
Query: 541 NLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEFLTPEDASAALS 600
NLPHSASEKAIIDCLNGFL SSGVNHIEGTQPCISCIIHKDR QALVEFLTPEDASAALS
Sbjct: 541 NLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPEDASAALS 600
Query: 601 FDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVAGFQTVAIFMQT 660
FDGSDFSGSILKIRRPKDYIE V T
Sbjct: 601 FDGSDFSGSILKIRRPKDYIETV------------------------------------T 660
Query: 661 GDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLKAYHFEMNDDIN 720
GDLDKS+PVVN+ISDVVEDSPNKIIVAGISNR+SSEMLRDIVTAFG LKAYHFEMNDD+N
Sbjct: 661 GDLDKSMPVVNKISDVVEDSPNKIIVAGISNRLSSEMLRDIVTAFGRLKAYHFEMNDDLN 720
Query: 721 EPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNGCQPCYGIPEHVKPL 780
+PCAFLEY+D+SVVSKACAGLNGMKIGG+VLKVFPAVPF STER GCQPCYGIPEHVKPL
Sbjct: 721 QPCAFLEYIDESVVSKACAGLNGMKIGGQVLKVFPAVPFPSTERTGCQPCYGIPEHVKPL 780
Query: 781 LQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVLEDIRFECARFGTVK 840
LQQPSVVLK+NNV FNADVLPVLSESDIDEVLEDIRFECARFGTVK
Sbjct: 781 LQQPSVVLKINNV---------------FNADVLPVLSESDIDEVLEDIRFECARFGTVK 840
Query: 841 SMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRNNNDLEDNYANLDNCP 900
SMNFVKPCNG V+ EEE+KKIS D++DVEIKHEIQENS VI RN+NDLEDN ANLD+CP
Sbjct: 841 SMNFVKPCNGGVNTEEEHKKIS-DISDVEIKHEIQENSKTVILRNSNDLEDNNANLDSCP 900
Query: 901 NDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENASERIPQGLSDQRSSPE 960
+DTNQKQ N NGR QDE +EDK CQ+GN DATCFE A ENASERI Q LS+QRSSPE
Sbjct: 901 SDTNQKQANCSGNGRHQDEAVEDKLCQMGNTDATCFEVAACENASERIRQVLSEQRSSPE 960
Query: 961 NELQNAKVAEIIETDETGSDKKSVCLD-SPMVVDDNEKKALNGLDPMVRTGSDASDKSEK 973
N+ QNAKV EIIETDETG DKK VC++ S M+V DNEKK+LNGLDP+VR S+A +KSEK
Sbjct: 961 NDFQNAKVTEIIETDETGLDKKLVCVEASSMMVADNEKKSLNGLDPVVRIASNAVEKSEK 1015
BLAST of Cla97C06G116850 vs. ExPASy TrEMBL
Match:
A0A5A7U8K0 (Splicing factor U2af large subunit B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00410 PE=4 SV=1)
HSP 1 Score: 1426.4 bits (3691), Expect = 0.0e+00
Identity = 796/1094 (72.76%), Postives = 849/1094 (77.61%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+THSCSKQYSRRSKKQT+SNS+DE+AARTRP SFEDIMLRRK KGS+ATVEV T
Sbjct: 1 MSTHSCSKQYSRRSKKQTRSNSDDETAARTRPFSFEDIMLRRKTKGSSATVEVDVT---- 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSI-EESAKDSSRRKKEETLLKDNMVVRS 120
STDNRASER+ RHSKGSSLDVQN+S+ EESAKDSSRRKKEET+LK+N+VVR+
Sbjct: 61 --------STDNRASERHFRHSKGSSLDVQNVSLEEESAKDSSRRKKEETVLKNNIVVRN 120
Query: 121 DRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAG 180
DRNNYESGLSLMSKLK+DRN KD+ EKYGQENLGWGKNDQS RIDIETET KRHSRDTA
Sbjct: 121 DRNNYESGLSLMSKLKHDRNEKDEREKYGQENLGWGKNDQSCRIDIETETAKRHSRDTAF 180
Query: 181 KDRREDHGRGKFERE--------------------------------------------- 240
KDRR+DHGRG+FERE
Sbjct: 181 KDRRQDHGRGEFERESKRKSQNGDDDRNRDSKRKSQNCVDESNKDGRRKSQNGDDDRNRD 240
Query: 241 ------------------------------------------------------------ 300
Sbjct: 241 SKRKSQNGDDDRNRDSKRKSQNGDDDRSRDSKRKSQNGDDDRNRDSKRKSQNGDDERNRD 300
Query: 301 ---------------NKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSH 360
+KRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRE+KEA VSLTS
Sbjct: 301 GKRKSQNGDDDRNRDSKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENREKKEAIVSLTSR 360
Query: 361 YEDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSD 420
Y+DSRLKR RKRS DRESKHRRSVSLSPR HKHSTKLARQKELPLDSHVKKSGRWRSDS+
Sbjct: 361 YQDSRLKRTRKRSSDRESKHRRSVSLSPRSHKHSTKLARQKELPLDSHVKKSGRWRSDSE 420
Query: 421 RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEK 480
RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSP SPEKKNEVLD+PPTEK
Sbjct: 421 RTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPLLSPEKKNEVLDLPPTEK 480
Query: 481 VKLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLI 540
V LFSGSV SNF P NPTVSLGISNDQSGGA FSSAMGKSLS VSSNNIAMKTKVS DL+
Sbjct: 481 VGLFSGSVASNFSPSNPTVSLGISNDQSGGAFFSSAMGKSLSVVSSNNIAMKTKVSFDLV 540
Query: 541 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQA 600
QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFL SSGVNHIEGTQPCISCIIHKDR QA
Sbjct: 541 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQA 600
Query: 601 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGY 660
LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIE V
Sbjct: 601 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIETV---------------------- 660
Query: 661 YHVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAF 720
TGDLDKS+PVVN+ISDVVEDSPNKIIVAGISNR+SSEMLRDIVTAF
Sbjct: 661 --------------TGDLDKSMPVVNKISDVVEDSPNKIIVAGISNRLSSEMLRDIVTAF 720
Query: 721 GCLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERN 780
G LKAYHFEMNDD+N+PCAFLEY+D+SVVSKACAGLNGMKIGG+VLKVFPAVPF STER
Sbjct: 721 GRLKAYHFEMNDDLNQPCAFLEYIDESVVSKACAGLNGMKIGGQVLKVFPAVPFPSTERT 780
Query: 781 GCQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEV 840
GCQPCYGIPEHVKPLLQQPSVVLK+NNV FNADVLPVLSESDIDEV
Sbjct: 781 GCQPCYGIPEHVKPLLQQPSVVLKINNV---------------FNADVLPVLSESDIDEV 840
Query: 841 LEDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRN 900
LEDIRFECARFGTVKSMNFVKPCNG V+ EEE+KKIS D++DVEIKHEIQENS VI RN
Sbjct: 841 LEDIRFECARFGTVKSMNFVKPCNGGVNTEEEHKKIS-DISDVEIKHEIQENSKTVILRN 900
Query: 901 NNDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENAS 960
+NDLEDN ANLD+CP+DTNQKQ N NGR QDE +EDK CQ+GN DATCFE A ENAS
Sbjct: 901 SNDLEDNNANLDSCPSDTNQKQANCSGNGRHQDEAVEDKLCQMGNTDATCFEVAACENAS 960
Query: 961 ERIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCLD-SPMVVDDNEKKALNGLD 973
ERI Q LS+QRSSPEN+ QNAKV EIIETDETG DKK VC++ S M+V DNEKK+LNGLD
Sbjct: 961 ERIRQVLSEQRSSPENDFQNAKVTEIIETDETGLDKKLVCVEASSMMVADNEKKSLNGLD 1020
BLAST of Cla97C06G116850 vs. ExPASy TrEMBL
Match:
A0A6J1H6S0 (splicing factor U2af large subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC111460135 PE=4 SV=1)
HSP 1 Score: 1383.6 bits (3580), Expect = 0.0e+00
Identity = 756/972 (77.78%), Postives = 810/972 (83.33%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M+++S SK YSRRSKKQT SNSNDESAARTRPLSFEDIMLRRKNKGSA TVEVG TGSHS
Sbjct: 1 MSSYSFSKHYSRRSKKQTLSNSNDESAARTRPLSFEDIMLRRKNKGSADTVEVGVTGSHS 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSIEESAKDSSRRKKEETLLKDNMVVRSD 120
RRESIDK STDN ASER+ RH KG+SLDVQNLS+EES KDSSRRKKEETLLKDNM VRSD
Sbjct: 61 RRESIDKLSTDNCASERHFRHGKGASLDVQNLSLEESGKDSSRRKKEETLLKDNMEVRSD 120
Query: 121 RNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAGK 180
RNNY+S L+LM KLKYD NG DK +KYGQEN+G GK +QSSR+DIE ETGKRHSRD+ K
Sbjct: 121 RNNYDSELTLMGKLKYDANGNDKKQKYGQENVGRGKKNQSSRVDIEKETGKRHSRDS--K 180
Query: 181 DRREDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHY 240
+RED GRG FER KRK QNGDD+ NRDKY AKRHDHGKHHD ENRERKEAK SLTS+Y
Sbjct: 181 AKREDLGRGNFERGGKRKDQNGDDEGNRDKYAAKRHDHGKHHDPENRERKEAKASLTSNY 240
Query: 241 EDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDR 300
EDSRL+RRRKRS+DRESKHRRSVSLSPRPHKHS+KL RQKELPLDSHVKKSGRWRSDSDR
Sbjct: 241 EDSRLQRRRKRSQDRESKHRRSVSLSPRPHKHSSKLVRQKELPLDSHVKKSGRWRSDSDR 300
Query: 301 TGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKV 360
TGD TN+SNSQYRRH GSTSGLGGYSPRKRRTESA+KTPSP +SPEKK+E LDVPPTEK+
Sbjct: 301 TGDLTNSSNSQYRRHFGSTSGLGGYSPRKRRTESAIKTPSPVQSPEKKDEGLDVPPTEKI 360
Query: 361 KLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
LFS S+ SNFQP N TVS GI N QSGGA+FSS +GKSL+GVSSNNI MKT VSLDLIQ
Sbjct: 361 GLFSSSINSNFQPSNATVSSGIINVQSGGAIFSSVIGKSLTGVSSNNIEMKTNVSLDLIQ 420
Query: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQAL 480
LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHI+GT PCISCIIHKDR QAL
Sbjct: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIKGTLPCISCIIHKDRGQAL 480
Query: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYY 540
VEFLTPEDASAALSFDGSDFSGSILKIRRPKDY+EIV
Sbjct: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYVEIV----------------------- 540
Query: 541 HVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFG 600
TG LDKSV VVN+I D VEDSPNKI +AGISNRISSEMLRDIVTAFG
Sbjct: 541 -------------TGGLDKSVAVVNKIIDTVEDSPNKIFIAGISNRISSEMLRDIVTAFG 600
Query: 601 CLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNG 660
LKA+HFEMNDD+NE CAFLEYVDQS+VSKACAGLNGMKIGGEVLKVFPAVPF S ERN
Sbjct: 601 PLKAFHFEMNDDLNERCAFLEYVDQSIVSKACAGLNGMKIGGEVLKVFPAVPFTSLERNE 660
Query: 661 CQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVL 720
CQP YGIPEHVKPLLQQP+VVLKVNNV FNADVLPVLSE+DIDEVL
Sbjct: 661 CQPWYGIPEHVKPLLQQPTVVLKVNNV---------------FNADVLPVLSEADIDEVL 720
Query: 721 EDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRNN 780
EDIR ECARFGTVKSMNFVKPCNGC SAEE+YK IS D+TDVEIKHEIQEN TM ISRN
Sbjct: 721 EDIRVECARFGTVKSMNFVKPCNGCFSAEEDYKNIS-DITDVEIKHEIQENCTMAISRNG 780
Query: 781 NDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENASE 840
ND+EDN NLDNCPNDTNQ+Q N P NGR QDE +E K C++G DDAT FE VA ENASE
Sbjct: 781 NDVEDNNVNLDNCPNDTNQRQGNCPGNGRHQDE-VEVKLCRMGQDDATRFEIVACENASE 840
Query: 841 RIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCLDSPMVVDDNEKKALNGLDPM 900
RIP+GLS+Q+SSP N+ Q+AKVAE IET+E DKKSVC+D M
Sbjct: 841 RIPRGLSEQQSSPGNQHQDAKVAETIETNEISPDKKSVCIDD---------------SAM 900
Query: 901 VRTGSDASDKSEKKDPNNNLESLFVLGSVFVEFGRMEASCMAAHSLHGRIYDGQEISIEY 960
VRT D S+KSEK DP NNL SLFVLGSVFVEFGR EASCMAAHSLHGRIYDGQEISIEY
Sbjct: 901 VRTDFDTSEKSEKDDPRNNLASLFVLGSVFVEFGRTEASCMAAHSLHGRIYDGQEISIEY 902
Query: 961 IPYDVYRKRFPK 973
IP+D+YRKRFPK
Sbjct: 961 IPHDLYRKRFPK 902
BLAST of Cla97C06G116850 vs. ExPASy TrEMBL
Match:
A0A6J1L124 (splicing factor U2af large subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111498921 PE=4 SV=1)
HSP 1 Score: 1357.4 bits (3512), Expect = 0.0e+00
Identity = 747/972 (76.85%), Postives = 801/972 (82.41%), Query Frame = 0
Query: 1 MNTHSCSKQYSRRSKKQTQSNSNDESAARTRPLSFEDIMLRRKNKGSAATVEVGATGSHS 60
M++ S SK YSRRSKKQT SNSNDESAARTRPLSFEDIMLRRKNKGSA TVEVG TGSHS
Sbjct: 1 MSSFSFSKHYSRRSKKQTLSNSNDESAARTRPLSFEDIMLRRKNKGSADTVEVGVTGSHS 60
Query: 61 RRESIDKHSTDNRASERNLRHSKGSSLDVQNLSIEESAKDSSRRKKEETLLKDNMVVRSD 120
RRESIDK STDN ASER+ RH KG+S DVQNLS+EES KDSSRRKKEETLLKDNM RSD
Sbjct: 61 RRESIDKLSTDNCASERHFRHGKGASPDVQNLSLEESGKDSSRRKKEETLLKDNMEFRSD 120
Query: 121 RNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETETGKRHSRDTAGK 180
RNNY+S L+LM KLKYD NG DK +KYG EN+G GKN+QSSR+DIE ETGKRHSRD+ K
Sbjct: 121 RNNYDSELTLMGKLKYDANGNDKKQKYGLENVGRGKNNQSSRVDIEKETGKRHSRDS--K 180
Query: 181 DRREDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHY 240
RRED GRGKFER KRK QNGDD+ NRDKY AKRHDHGKHHD ENRERKEAK SLTS+Y
Sbjct: 181 ARREDLGRGKFERGGKRKDQNGDDEGNRDKYAAKRHDHGKHHDPENRERKEAKGSLTSNY 240
Query: 241 EDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDR 300
EDSRLK+RRKRS+DRESKHR +SPRPHKHSTKLARQKELPLDS+VKKSGRWRSDSDR
Sbjct: 241 EDSRLKKRRKRSQDRESKHR----ISPRPHKHSTKLARQKELPLDSNVKKSGRWRSDSDR 300
Query: 301 TGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKV 360
TGD TN+SNSQYRR SGSTSGLGGYSPRKRRTESAVKTPSP +SPEKK+E LD+PPTEK+
Sbjct: 301 TGDLTNSSNSQYRRQSGSTSGLGGYSPRKRRTESAVKTPSPVQSPEKKDEGLDLPPTEKI 360
Query: 361 KLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQ 420
LFS S+ SNFQP N TVS GI N QSGGA+FSS +G+SLSGVSSNNI MKT VSLDLIQ
Sbjct: 361 GLFSSSINSNFQPSNTTVSSGIINVQSGGAIFSSVIGRSLSGVSSNNIEMKTNVSLDLIQ 420
Query: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQAL 480
LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSG+NHI+GT PCISCIIHKDR QAL
Sbjct: 421 LTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGINHIKGTLPCISCIIHKDRGQAL 480
Query: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYY 540
VEFLTPEDASAALSFDGSDFSGSILKIRRPKDY+EIV
Sbjct: 481 VEFLTPEDASAALSFDGSDFSGSILKIRRPKDYVEIV----------------------- 540
Query: 541 HVAGFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFG 600
TG LDKSV VVN+I D VEDSPNKI +AGISNRISSEMLRDIVTAFG
Sbjct: 541 -------------TGGLDKSVAVVNKIIDTVEDSPNKIFIAGISNRISSEMLRDIVTAFG 600
Query: 601 CLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNG 660
LKAYHFEMNDD+NE CAFLEYVDQS+VSKACAGLNGMKIGGEVLKVFPAVPF ERN
Sbjct: 601 PLKAYHFEMNDDLNERCAFLEYVDQSIVSKACAGLNGMKIGGEVLKVFPAVPFTPLERNE 660
Query: 661 CQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVL 720
CQP YGIPEHVKPLLQQP+VVLKVNNV FNADVLPVLSE+DIDEVL
Sbjct: 661 CQPWYGIPEHVKPLLQQPTVVLKVNNV---------------FNADVLPVLSEADIDEVL 720
Query: 721 EDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQENSTMVISRNN 780
EDIR ECARFGTVKSMNFVKPCNGC SAEE+YK IS D+TDVEIKHEIQEN TM ISRN
Sbjct: 721 EDIRVECARFGTVKSMNFVKPCNGCFSAEEDYKNIS-DITDVEIKHEIQENCTMAISRNG 780
Query: 781 NDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATCFEFVARENASE 840
ND+EDN NLDNCPN TNQ+Q N P NGR DE +EDK C++G DDAT FE VA ENASE
Sbjct: 781 NDVEDNNVNLDNCPNGTNQRQGNCPGNGRHHDEVVEDKLCRMGQDDATRFEIVACENASE 840
Query: 841 RIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCLDSPMVVDDNEKKALNGLDPM 900
R P+GLS+Q+SSP N+ ++AKVAE IET+E DKKSVCL+ M
Sbjct: 841 RNPRGLSEQQSSPGNQHRDAKVAETIETNEISPDKKSVCLND---------------SAM 899
Query: 901 VRTGSDASDKSEKKDPNNNLESLFVLGSVFVEFGRMEASCMAAHSLHGRIYDGQEISIEY 960
VRT SD S KS+K D NNL SLFVLGSVFVEFGR EASCMAAHSLHGRIYDGQEISIEY
Sbjct: 901 VRTDSDTSAKSKKGDRRNNLASLFVLGSVFVEFGRTEASCMAAHSLHGRIYDGQEISIEY 899
Query: 961 IPYDVYRKRFPK 973
IP+D+YRKRFPK
Sbjct: 961 IPHDLYRKRFPK 899
BLAST of Cla97C06G116850 vs. TAIR 10
Match:
AT2G33435.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 218.4 bits (555), Expect = 2.5e-56
Identity = 181/466 (38.84%), Postives = 248/466 (53.22%), Query Frame = 0
Query: 58 SHSRRESIDKHSTDNRASERNLRHSKGSSLDVQNLSIEESAKDSSRRKKEETLLKDNMVV 117
S SR E++DK D S R R ++G + SIEE +KD R KKEET N
Sbjct: 530 SSSREENLDKQKKDESTSNRK-RKAEGECSTAETESIEEHSKD-RRGKKEET----NSNC 589
Query: 118 RSDRNNYESGLSLMSKLKYDRNGKDKIEKYGQENLGWGKNDQSSRIDIETET-------- 177
R +R + +K +E+L + + ET+T
Sbjct: 590 REERRD---------------------KKMKKEDLASNRKIEGEIPTTETKTMTDRDGLC 649
Query: 178 GKRHSRDTAGKDRREDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRER 237
K+ R D D K + +KRK+QNG+ +NR+ ++KRHD GK H +E ER
Sbjct: 650 SKKRLRSLVVADVPRDESSIKPDNGDKRKNQNGNHKKNREINMSKRHDPGKVHSVEVSER 709
Query: 238 KEAKVSLTSHYEDSRLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVK 297
E + S D R KRRR RSRD ++ S PR K +++ R E ++ VK
Sbjct: 710 WERREQPKSRQRDLREKRRRSRSRDHGQDRQKRSSPLPRAEKATSRHKRNHEERSENVVK 769
Query: 298 KSGRWRSDSDRTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPAR-SPEKK 357
+D T+T +++ RR+S S S LGGYSPRKRR +++ K SP S EKK
Sbjct: 770 DRSGKHHCNDNEDKVTSTVSNKSRRYSASKSELGGYSPRKRREQASTKAASPPNLSSEKK 829
Query: 358 NEVLDVPPTEKVKLFSGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNI 417
+ + T +FS SV S Q T IS ++ L M +
Sbjct: 830 SAKWGLAATVTAGMFSDSVFSGLQAATQTAYPTIS--EASLTLLKPLM---VMDAPFRTP 889
Query: 418 AMKTKVSLDLIQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCI 477
+ S D +QLT++TR MRRLY EN+P SASEK++I+C NG++ SSG NHI+G++PCI
Sbjct: 890 PARQTTSFDSVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCI 949
Query: 478 SCIIHKDRAQALVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYI 515
SCII+K+++QALVEFLTP+DASAALS DG F+GS LKIRRPKDY+
Sbjct: 950 SCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYV 963
BLAST of Cla97C06G116850 vs. TAIR 10
Match:
AT2G33440.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 178.7 bits (452), Expect = 2.2e-44
Identity = 127/382 (33.25%), Postives = 196/382 (51.31%), Query Frame = 0
Query: 591 MLRDIVTAFGCLKAYHFEMNDDINEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPA 650
ML +IV+ FG LKAY F N+D+N+ CAFLEY D SV KACAGLNGM++GG V+ A
Sbjct: 1 MLMEIVSVFGPLKAYRFVSNNDLNQRCAFLEYTDGSVTLKACAGLNGMRLGGSVITAVCA 60
Query: 651 VPFASTER-NGCQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLP 710
P AS+ N P YGIP H KPLL +P +LK+ NV + + L
Sbjct: 61 FPDASSVAVNENPPFYGIPSHAKPLLGKPKNILKLKNV---------------VDPEDLT 120
Query: 711 VLSESDIDEVLEDIRFECARFGTVKSMNFVKPCNGCVSAEEEYKKISDDVTDVEIKHEIQ 770
SE ++ E+LED+R ECARFG +KS+N ++ + ++ E ++ + TD +
Sbjct: 121 SFSEQEVKEILEDVRLECARFGVIKSINILEHKSKDITVSETNPLLNLESTD------SK 180
Query: 771 ENSTMVISRNNNDLEDNYANLDNCPNDTNQKQVNSPSNGRRQDEGMEDKFCQIGNDDATC 830
E + VI + E ++ ++ + +V P + EDK C+ +D A
Sbjct: 181 EMNVSVIEEKDEGSE----KAEDIADNVDLAEVVMPDSLTG-----EDKLCEPCSDTAA- 240
Query: 831 FEFVARENASERIPQGLSDQRSSPENELQNAKVAEIIETDETGSDKKSVCLDSPMVVDDN 890
+ S+ ENE ++ T++ +K + +S +N
Sbjct: 241 -------------------ETSTQENE-------DLHSTEQEHCEK--IVEESAQAEAEN 300
Query: 891 EKKALNGLDPMVRTGSDASDKSEKKDPNNNLESLFVLGSVFVEFGRMEASCMAAHSLHGR 950
++ + V+T DA DK E ++ + E +F G +F+E+ R EA+C AAHSLHGR
Sbjct: 301 PQEVAS--VRTVKTRWDAGDKIE-EEQEEDPEDVFETGCIFIEYRRPEATCDAAHSLHGR 320
Query: 951 IYDGQEISIEYIPYDVYRKRFP 972
+YD + + EY+ ++Y+ RFP
Sbjct: 361 LYDNRIVKAEYVSKELYQIRFP 320
BLAST of Cla97C06G116850 vs. TAIR 10
Match:
AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 89.4 bits (220), Expect = 1.8e-17
Identity = 141/591 (23.86%), Postives = 238/591 (40.27%), Query Frame = 0
Query: 156 KNDQSSRIDIETETGKRHSRDTAGKDRREDHGRGKFERENKRKSQNGDDDRNRDKYIAKR 215
K D S + + E G R +DR +D R K ++ KS++ D DR R K +
Sbjct: 43 KKDSSKISEKDNENG-RDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRD 102
Query: 216 HDHGKHHDLENRERKEAKVSL-TSHYEDSRLK-RRRKRSRDRESKHRRSVSLSPRPHKHS 275
H H +RER E + L H+ SR + RRR R RDRE +HRR
Sbjct: 103 RHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRR------------ 162
Query: 276 TKLARQKELPLDSHVKKSGRWRSDSDRTGDFTNTSNSQYRRHSGSTSGLGGYSPRKRRTE 335
+ R RS S+R + S++R S S S
Sbjct: 163 ---------------RSRSRSRSRSERRSRSEHRHKSEHRSRSRSRS------------- 222
Query: 336 SAVKTPSPARSPEKKNEVLDVPPTEKVKLFSGSVTSNFQPPNPTVSLGISNDQSGGALFS 395
RS K+ D+ P + L + +V + Q P+ + I S +F
Sbjct: 223 ---------RSKSKRRSGFDMAPPD--MLAATAVAAAGQVPSVPTTATIPGMFSN--MFP 282
Query: 396 SAMGKSLSGVSSNNIAMKTKVSLDLIQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFL 455
G+ L + + T+ QATR RR+Y+ LP +A+E+++ + +
Sbjct: 283 MVPGQQLGALPVLPVQAMTQ---------QATRHARRVYVGGLPPTANEQSVSTFFSQVM 342
Query: 456 TSSGVNHIEGTQPCISCIIHKDRAQALVEFLTPEDASAALSFDGSDFSGSILKIRRPKDY 515
++ G N ++ I+ ++ A VE + E+AS A++ DG G +K+RRP D
Sbjct: 343 SAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTD- 402
Query: 516 IEIVYIVPVAQDLDEIVLLSEVYCGYYHVAGFQTVAIFMQTGDLDKSVPVVNEISDVVED 575
Y+ + T+ +L+ ++ S +
Sbjct: 403 --------------------------YNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLE 462
Query: 576 SPNKIIVAGISNRISSEMLRDIVTAFGCLKAYHFEMNDDI--NEPCAFLEYVDQSVVSKA 635
P++I V G+ + +R+++ +FG L+ ++ + + ++ AF Y D SV A
Sbjct: 463 GPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIA 522
Query: 636 CAGLNGMKIGGEVLKVFPAVPFASTERNGCQPCYGIPEHVKPLLQQPSVVLKVNNVCYVQ 695
CA LNG+K+G + L V A+ + QP PE + LL + +
Sbjct: 523 CAALNGIKMGDKTLTVRRAI------QGAIQP---KPEQEEVLLYAQQQIALQRLMFQPG 532
Query: 696 SSDWAFTFWTQ-FNADVLPVLSESDIDEVLEDIRFECARFGTVKSMNFVKP 742
+ TQ AD L + + E++ED+R E +FG + ++ +P
Sbjct: 583 GTPTKIVCLTQVVTADDL--RDDEEYAEIMEDMRQEGGKFGNLVNVVIPRP 532
BLAST of Cla97C06G116850 vs. TAIR 10
Match:
AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 87.4 bits (215), Expect = 6.8e-17
Identity = 123/560 (21.96%), Postives = 235/560 (41.96%), Query Frame = 0
Query: 184 EDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHYEDS 243
E++G E E++ S+ + R+ ++ ++ D + + ++++VS S D
Sbjct: 20 EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDG 79
Query: 244 RLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDRTGD 303
++ ++RSRD++ HR S R HS + ++E + GR D R+ D
Sbjct: 80 --EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRE--------RGGRDDDDYRRSRD 139
Query: 304 FTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKVKLF 363
+ + R G S K R+E ++ SP++S ++ + D+ P L
Sbjct: 140 ---RDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSG-FDMAPPASAMLA 199
Query: 364 SGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQLTQ 423
+G+ + PP P G + +F G+S G+S I T+ Q
Sbjct: 200 AGAAVTGQVPPAPPTLPGAGMFPN---MFPLPTGQSFGGLSMMPIQAMTQ---------Q 259
Query: 424 ATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEF 483
ATR RR+Y+ L +A+E+++ + + + G N ++ I+ ++ A VE
Sbjct: 260 ATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEM 319
Query: 484 LTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVA 543
+ E+AS A+S DG F G+ +K+RRP D Y+ +
Sbjct: 320 RSVEEASNAMSLDGIIFEGAPVKVRRPSD---------------------------YNPS 379
Query: 544 GFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLK 603
T+ + L+ + + + + P++I V G+ + +R+++ +FG LK
Sbjct: 380 LAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLK 439
Query: 604 AYHFEMNDDI--NEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKVFPAVPFASTERNGC 663
+ + + ++ AF Y D SV ACA LNG+K+G + L V A ++
Sbjct: 440 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQK--- 499
Query: 664 QPCYGIPEHVKPLLQQPSVVLKVNNVCYVQSSDWAFTFWTQFNADVLPVLSESDIDEVLE 723
PE LL + + + TQ + + + + +++E
Sbjct: 500 ------PEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTED-ELRDDEEYGDIME 516
Query: 724 DIRFECARFGTVKSMNFVKP 742
D+R E +FG + ++ +P
Sbjct: 560 DMRQEGGKFGALTNVVIPRP 516
BLAST of Cla97C06G116850 vs. TAIR 10
Match:
AT4G36690.3 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 84.0 bits (206), Expect = 7.5e-16
Identity = 109/466 (23.39%), Postives = 203/466 (43.56%), Query Frame = 0
Query: 184 EDHGRGKFERENKRKSQNGDDDRNRDKYIAKRHDHGKHHDLENRERKEAKVSLTSHYEDS 243
E++G E E++ S+ + R+ ++ ++ D + + ++++VS S D
Sbjct: 20 EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDG 79
Query: 244 RLKRRRKRSRDRESKHRRSVSLSPRPHKHSTKLARQKELPLDSHVKKSGRWRSDSDRTGD 303
++ ++RSRD++ HR S R HS + ++E + GR D R+ D
Sbjct: 80 --EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRE--------RGGRDDDDYRRSRD 139
Query: 304 FTNTSNSQYRRHSGSTSGLGGYSPRKRRTESAVKTPSPARSPEKKNEVLDVPPTEKVKLF 363
+ + R G S K R+E ++ SP++S ++ + D+ P L
Sbjct: 140 ---RDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSG-FDMAPPASAMLA 199
Query: 364 SGSVTSNFQPPNPTVSLGISNDQSGGALFSSAMGKSLSGVSSNNIAMKTKVSLDLIQLTQ 423
+G+ + PP P G + +F G+S G+S I T+ Q
Sbjct: 200 AGAAVTGQVPPAPPTLPGAGMFPN---MFPLPTGQSFGGLSMMPIQAMTQ---------Q 259
Query: 424 ATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRAQALVEF 483
ATR RR+Y+ L +A+E+++ + + + G N ++ I+ ++ A VE
Sbjct: 260 ATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEM 319
Query: 484 LTPEDASAALSFDGSDFSGSILKIRRPKDYIEIVYIVPVAQDLDEIVLLSEVYCGYYHVA 543
+ E+AS A+S DG F G+ +K+RRP D Y+ +
Sbjct: 320 RSVEEASNAMSLDGIIFEGAPVKVRRPSD---------------------------YNPS 379
Query: 544 GFQTVAIFMQTGDLDKSVPVVNEISDVVEDSPNKIIVAGISNRISSEMLRDIVTAFGCLK 603
T+ + L+ + + + + P++I V G+ + +R+++ +FG LK
Sbjct: 380 LAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLK 432
Query: 604 AYHFEMNDDI--NEPCAFLEYVDQSVVSKACAGLNGMKIGGEVLKV 648
+ + + ++ AF Y D SV ACA LNG+K+G + L V
Sbjct: 440 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 432
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906743.1 | 0.0e+00 | 86.54 | splicing factor U2af large subunit B [Benincasa hispida] | [more] |
XP_008460665.1 | 0.0e+00 | 74.81 | PREDICTED: splicing factor U2af large subunit B isoform X2 [Cucumis melo] | [more] |
XP_008460661.1 | 0.0e+00 | 73.77 | PREDICTED: splicing factor U2af large subunit B isoform X1 [Cucumis melo] >XP_00... | [more] |
KAA0050717.1 | 0.0e+00 | 72.76 | splicing factor U2af large subunit B isoform X1 [Cucumis melo var. makuwa] >TYK0... | [more] |
XP_022959019.1 | 0.0e+00 | 77.78 | splicing factor U2af large subunit B-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q24562 | 3.4e-29 | 27.33 | Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster OX=7227 GN=U2af50... | [more] |
P90978 | 1.0e-25 | 25.38 | Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans OX=6239 GN=uaf-1 P... | [more] |
P26368 | 1.3e-25 | 26.27 | Splicing factor U2AF 65 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF2 PE=1 SV=4 | [more] |
P26369 | 1.7e-25 | 26.27 | Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3 | [more] |
P90727 | 5.0e-25 | 25.05 | Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis briggsae OX=6238 GN=uaf-1 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CCY4 | 0.0e+00 | 74.81 | splicing factor U2af large subunit B isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3CD15 | 0.0e+00 | 73.77 | splicing factor U2af large subunit B isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7U8K0 | 0.0e+00 | 72.76 | Splicing factor U2af large subunit B isoform X1 OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A6J1H6S0 | 0.0e+00 | 77.78 | splicing factor U2af large subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A6J1L124 | 0.0e+00 | 76.85 | splicing factor U2af large subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
Match Name | E-value | Identity | Description | |
AT2G33435.1 | 2.5e-56 | 38.84 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT2G33440.1 | 2.2e-44 | 33.25 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT1G60900.1 | 1.8e-17 | 23.86 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |
AT4G36690.1 | 6.8e-17 | 21.96 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |
AT4G36690.3 | 7.5e-16 | 23.39 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |